Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 2.2e-137 492.3 249 100.0
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 2.8e-108 395.6 197 98.0
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 1.5e-104 383.3 273 75.1
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 3.3e-104 382.1 299 70.2
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 1.2e-103 380.2 247 78.1
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 2.1e-103 379.4 275 75.6
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 1.1e-99 367.1 263 74.9
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 2.1e-95 352.8 248 73.8
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 1.3e-92 343.6 254 69.3
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 1.1e-91 340.5 273 66.7
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 7.0e-91 337.8 274 66.4
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 3.9e-89 332.0 239 69.5
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 4.3e-88 328.6 221 72.9
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 4.7e-87 325.1 275 62.9
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 1.4e-86 323.6 267 62.2
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 1.8e-86 323.2 266 62.8
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 5.2e-86 321.6 260 65.4
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.2e-85 320.5 264 63.3
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 2.6e-85 319.3 234 66.7
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 3.4e-85 318.9 275 61.8
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 1.3e-84 317.0 271 62.4
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 1.1e-83 313.9 263 63.5
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 4.1e-83 312.0 268 59.0
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 5.4e-83 311.6 228 66.7
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 5.4e-83 311.6 228 66.7
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 5.4e-83 311.6 276 59.1
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 9.2e-83 310.8 280 58.6
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 9.2e-83 310.8 269 59.5
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 9.2e-83 310.8 270 58.5
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 1.2e-82 310.5 271 63.8
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 1.2e-82 310.5 270 58.5
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 1.2e-82 310.5 271 60.9
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 2.7e-82 309.3 278 60.1
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 1.0e-81 307.4 287 57.8
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 1.7e-81 306.6 270 58.1
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 2.3e-81 306.2 251 61.8
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.3e-81 306.2 268 59.0
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 3.9e-81 305.4 247 63.2
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 3.9e-81 305.4 271 60.5
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 8.6e-81 304.3 236 64.0
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 1.1e-80 303.9 269 60.2
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 1.1e-80 303.9 245 62.0
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 1.5e-80 303.5 221 67.0
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 1.9e-80 303.1 282 57.4
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.5e-80 302.8 269 58.4
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 2.5e-80 302.8 256 59.8
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 3.3e-80 302.4 245 64.1
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 4.3e-80 302.0 250 61.6
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 5.6e-80 301.6 221 66.1
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 5.6e-80 301.6 269 58.4
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 9.5e-80 300.8 278 57.2
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 9.5e-80 300.8 288 56.2
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 1.6e-79 300.1 272 57.7
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 2.8e-79 299.3 253 65.2
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 2.8e-79 299.3 280 58.9
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 2.8e-79 299.3 221 67.0
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 3.6e-79 298.9 252 61.9
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 4.7e-79 298.5 269 57.6
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 1.4e-78 297.0 275 58.5
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 1.4e-78 297.0 275 57.8
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 1.8e-78 296.6 239 62.8
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 1.8e-78 296.6 253 64.4
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 2.4e-78 296.2 270 58.1
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 6.8e-78 294.7 269 58.0
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.2e-77 293.9 280 56.4
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 1.2e-77 293.9 229 63.3
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 2.0e-77 293.1 236 60.6
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 2.6e-77 292.7 234 62.4
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 2.6e-77 292.7 241 59.3
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 3.4e-77 292.4 221 65.6
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 4.4e-77 292.0 229 63.3
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 7.6e-77 291.2 273 58.6
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 9.9e-77 290.8 229 64.2
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 3.8e-76 288.9 274 58.0
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 4.9e-76 288.5 247 59.5
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 6.4e-76 288.1 281 56.2
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 6.4e-76 288.1 247 59.5
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 2.4e-75 286.2 228 61.0
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 3.2e-75 285.8 276 55.4
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 4.1e-75 285.4 239 60.3
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 7.1e-75 284.6 283 54.4
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 7.1e-75 284.6 276 55.8
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 1.2e-74 283.9 281 55.9
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 1.6e-74 283.5 283 53.0
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 2.7e-74 282.7 258 57.8
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 4.6e-74 282.0 270 57.4
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 2.3e-73 279.6 257 57.2
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 2.3e-73 279.6 276 54.3
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 6.6e-73 278.1 276 56.9
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.1e-72 277.3 261 56.7
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 1.5e-72 276.9 281 55.2
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 3.3e-72 275.8 269 56.1
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 4.3e-72 275.4 269 56.1
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 2.0e-69 266.5 270 53.7
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 5.8e-69 265.0 273 49.8
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 5.6e-64 248.4 230 56.5
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 9.6e-64 247.7 201 59.2
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 1.1e-62 244.2 221 55.7
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 1.4e-62 243.8 253 49.8
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 2.6e-61 239.6 130 89.2
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 3.4e-61 239.2 251 50.6
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 7.6e-61 238.0 183 66.1
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 1.3e-60 237.3 160 78.8
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 8.4e-60 234.6 230 52.2
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 8.4e-60 234.6 250 49.2
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 4.2e-59 232.3 262 51.1
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 4.2e-59 232.3 229 55.9
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 7.1e-59 231.5 262 51.1
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 8.7e-57 224.6 183 60.7
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 4.3e-56 222.2 261 47.9
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 9.6e-56 221.1 183 60.1
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 2.4e-54 216.5 244 52.0
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 2.0e-53 213.4 175 62.9
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 7.6e-53 211.5 179 60.3
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 9.6e-48 194.5 163 61.3
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 1.2e-45 187.6 177 58.8
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 1.3e-44 184.1 233 45.5
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 2.7e-34 149.8 265 34.7
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 4.6e-34 149.1 266 40.2
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 1.8e-33 147.1 309 32.7
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 4.3e-32 142.5 113 68.1
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 2.6e-29 133.3 113 61.9
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 4.5e-29 132.5 77 80.5
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 2.2e-28 130.2 121 55.4
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 3.2e-27 126.3 77 76.6
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 3.6e-26 122.9 295 32.2
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 5.1e-25 119.0 76 69.7
BolC4t27198H Brassica oleracea HOM05D005844 ORTHO05D007203 6.7e-25 118.6 173 44.5
QL12p001810 Quercus lobata HOM05D005844 ORTHO05D007203 9.7e-24 114.8 72 69.4
SMO202G0011 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 2.6e-21 106.7 94 57.4
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 3.9e-17 92.8 77 61.0
CARHR261460 Cardamine hirsuta HOM05D005844 ORTHO05D007203 7.7e-13 78.6 56 64.3
Cfa024741 Carpinus fangiana HOM05D005844 ORTHO05D007203 5.5e-11 72.4 259 26.6
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 1.6e-10 70.9 74 50.0


User provided reference genes

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