Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 1.2e-53 213.0 116 100.0
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 1.0e-31 140.2 116 76.7
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 3.6e-29 131.7 123 67.5
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 2.4e-25 119.0 115 68.7
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 3.5e-24 115.2 99 65.7
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 2.7e-21 105.5 109 63.3
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 1.2e-19 100.1 109 63.3
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 1.2e-19 100.1 116 62.1
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 2.6e-19 99.0 95 63.2
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 4.4e-19 98.2 109 61.5
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 7.5e-19 97.4 86 64.0
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 9.1e-17 90.5 113 56.6
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 9.1e-17 90.5 114 57.0
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 9.1e-17 90.5 98 59.2
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 1.6e-16 89.7 114 52.6
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 4.5e-16 88.2 130 48.5
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 2.9e-15 85.5 119 52.1
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 3.8e-15 85.1 108 54.6
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 5.0e-15 84.7 109 56.0
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 3.2e-14 82.0 132 49.2
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 1.2e-13 80.1 132 48.5
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.6e-13 79.7 111 53.2
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 2.1e-13 79.3 115 51.3
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 2.7e-13 79.0 112 50.9
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 3.6e-13 78.6 131 45.8
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 4.7e-13 78.2 129 49.6
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 8.0e-13 77.4 132 47.7
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 8.8e-12 73.9 115 50.4
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 1.5e-11 73.2 127 46.5
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 1.5e-11 73.2 105 50.5
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 2.6e-11 72.4 109 49.5
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 3.4e-11 72.0 116 51.7
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 3.4e-11 72.0 115 47.0
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 3.4e-11 72.0 114 49.1
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 4.4e-11 71.6 128 43.8
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 4.4e-11 71.6 99 50.5
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 5.7e-11 71.2 127 48.8
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 7.5e-11 70.9 127 48.8
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 7.5e-11 70.9 127 48.8
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 7.5e-11 70.9 109 52.3
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 7.5e-11 70.9 120 47.5
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 9.8e-11 70.5 122 45.1
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 9.8e-11 70.5 113 47.8
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 9.8e-11 70.5 129 47.3
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 1.3e-10 70.1 99 49.5
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 1.3e-10 70.1 109 50.5
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 2.8e-10 68.9 132 47.7
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 4.8e-10 68.2 110 45.5
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 8.3e-10 67.4 111 48.6
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 8.3e-10 67.4 115 48.7
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 1.8e-09 66.2 116 46.6
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 2.4e-09 65.9 103 47.6
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 3.1e-09 65.5 108 49.1
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 5.4e-09 64.7 132 46.2
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 7.0e-09 64.3 108 47.2
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 9.1e-09 63.9 106 48.1
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 1.2e-08 63.5 108 50.0
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 1.6e-08 63.2 131 45.8
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 2.0e-08 62.8 114 42.1
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 7.7e-08 60.8 125 44.0
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 1.0e-07 60.5 106 48.1
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 3.8e-07 58.5 107 46.7
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 6.6e-07 57.8 110 46.4
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 6.6e-07 57.8 97 46.4
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 6.6e-07 57.8 104 41.3
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 6.6e-07 57.8 104 41.3
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 8.6e-07 57.4 127 39.4
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 1.5e-06 56.6 108 46.3
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 1.9e-06 56.2 113 38.9
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 1.9e-06 56.2 108 43.5


User provided reference genes

Program Settings