Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08446_v3 Cicer arietinum L. HOM05D000610 ORTHO05D004774 1.5e-178 629.4 314 100.0
TPR.G3701 Trifolium pratense HOM05D000610 ORTHO05D004774 2.8e-161 572.0 309 92.9
Psat3g072960 Pisum sativum HOM05D000610 ORTHO05D004774 8.1e-161 570.5 309 91.3
Medtr7g091380 Medicago truncatula HOM05D000610 ORTHO05D004774 2.9e-158 562.0 309 90.6
Lj1g0005409 Lotus japonicus HOM05D000610 ORTHO05D004774 1.8e-152 542.7 308 86.0
Glyma.03G136000 Glycine max HOM05D000610 ORTHO05D004774 1.7e-150 536.2 309 85.4
Phvul.001G131150 Phaseolus vulgaris HOM05D000610 ORTHO05D004774 7.4e-146 520.8 309 82.2
arahy.Tifrunner.gnm1.ann1.50CUSQ Arachis hypogaea HOM05D000610 ORTHO05D004774 2.8e-145 518.8 309 82.8
arahy.Tifrunner.gnm1.ann1.624G49 Arachis hypogaea HOM05D000610 ORTHO05D004774 2.8e-145 518.8 309 82.8
arahy.Tifrunner.gnm1.ann1.LF6SQW Arachis hypogaea HOM05D000610 ORTHO05D004774 4.8e-145 518.1 309 83.2
Lalb_Chr25g0287161 Lupinus albus HOM05D000610 ORTHO05D004774 2.0e-143 512.7 309 81.6
Gorai.002G146400 Gossypium raimondii HOM05D000610 ORTHO05D004774 4.8e-129 464.9 309 72.8
COL.COLO4_08235 Corchorus olitorius HOM05D000610 ORTHO05D004774 6.3e-129 464.5 309 73.1
Gohir.D01G120000 Gossypium hirsutum HOM05D000610 ORTHO05D004774 1.4e-128 463.4 309 72.8
Gohir.A01G131111 Gossypium hirsutum HOM05D000610 ORTHO05D004774 4.1e-128 461.8 309 72.2
FAN02G4008 Fragaria x ananassa HOM05D000610 ORTHO05D004774 9.1e-128 460.7 309 74.1
Prupe.7G058100 Prunus persica HOM05D000610 ORTHO05D004774 9.1e-128 460.7 309 73.1
Ciclev10004128m.g Citrus clementina HOM05D000610 ORTHO05D004774 1.5e-127 459.9 309 71.5
FAN14G3175 Fragaria x ananassa HOM05D000610 ORTHO05D004774 1.5e-127 459.9 309 74.1
Cfa016807 Carpinus fangiana HOM05D000610 ORTHO05D004774 2.6e-127 459.1 309 72.5
RcHm_v2.0_Chr3g0482761 Rosa chinensis HOM05D000610 ORTHO05D004774 5.9e-127 458.0 309 74.1
TWI53G1231 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 1.7e-126 456.4 309 73.5
Eucgr.A02339 Eucalyptus grandis HOM05D000610 ORTHO05D004774 2.2e-126 456.1 309 73.1
FAN09G1277 Fragaria x ananassa HOM05D000610 ORTHO05D004774 2.2e-126 456.1 309 73.5
Atru.chr1.1122 Acer truncatum HOM05D000610 ORTHO05D004774 2.9e-126 455.7 309 72.2
Potri.006G049300 Populus trichocarpa HOM05D000610 ORTHO05D004774 2.9e-126 455.7 309 71.5
Haze_19840 Corylus avellana HOM05D000610 ORTHO05D004774 3.8e-126 455.3 309 72.5
PGR004G2234 Punica granatum HOM05D000610 ORTHO05D004774 8.5e-126 454.1 309 73.8
TWI74G1635 Tripterygium wilfordii HOM05D000610 ORTHO05D004774 3.2e-125 452.2 309 72.5
CANSAT80G2124 Cannabis sativa HOM05D000610 ORTHO05D004774 7.2e-125 451.1 309 72.2
Manes.09G020400 Manihot esculenta HOM05D000610 ORTHO05D004774 7.2e-125 451.1 309 73.5
MD12G1079400 Malus domestica HOM05D000610 ORTHO05D004774 9.4e-125 450.7 310 72.6
Thecc.05G148900 Theobroma cacao HOM05D000610 ORTHO05D004774 2.1e-124 449.5 309 71.5
Dinv18665 Davidia involucrata HOM05D000610 ORTHO05D004774 8.0e-124 447.6 310 71.3
GSVIVG01033258001 Vitis vinifera HOM05D000610 ORTHO05D004774 2.0e-122 443.0 310 70.6
CSS0013319 Camellia sinensis var. sinensis HOM05D000610 ORTHO05D004774 6.3e-121 438.0 312 69.6
DCAR_020494 Daucus carota HOM05D000610 ORTHO05D004774 1.1e-120 437.2 310 69.4
CiPaw.09G038900 Carya illinoinensis HOM05D000610 ORTHO05D004774 7.0e-120 434.5 309 70.6
Sed0024936 Sechium edule HOM05D000610 ORTHO05D004774 2.6e-119 432.6 311 68.5
CsaV3_4G011860 Cucumis sativus L. HOM05D000610 ORTHO05D004774 1.3e-118 430.3 311 68.2
Rhsim03G0027100 Rhododendron simsii HOM05D000610 ORTHO05D004774 2.2e-118 429.5 300 70.3
Aqoxy1G00231 Aquilegia oxysepala HOM05D000610 ORTHO05D004774 3.8e-118 428.7 310 66.8
Nn7g36312 Nelumbo nucifera HOM05D000610 ORTHO05D004774 6.5e-118 427.9 310 68.4
MELO3C023103.2 Cucumis melo HOM05D000610 ORTHO05D004774 1.9e-117 426.4 311 67.5
HanXRQChr10g0300621 Helianthus annuus HOM05D000610 ORTHO05D004774 5.5e-117 424.9 308 66.2
AL4G40000 Arabidopsis lyrata HOM05D000610 ORTHO05D004774 3.6e-116 422.2 310 67.1
BraA03t11555Z Brassica rapa HOM05D000610 ORTHO05D004774 4.0e-115 418.7 313 65.8
CARHR136790 Cardamine hirsuta HOM05D000610 ORTHO05D004774 5.2e-115 418.3 309 67.0
Carub.0004s2397 Capsella rubella HOM05D000610 ORTHO05D004774 6.8e-115 417.9 309 66.3
Lsat_1_v5_gn_9_30620 Lactuca sativa HOM05D000610 ORTHO05D004774 6.8e-115 417.9 312 64.7
Peaxi162Scf00130g00325 Petunia axillaris HOM05D000610 ORTHO05D004774 1.2e-114 417.2 310 67.7
BolC3t15161H Brassica oleracea HOM05D000610 ORTHO05D004774 1.5e-114 416.8 313 65.8
THA.LOC104824436 Tarenaya hassleriana HOM05D000610 ORTHO05D004774 4.4e-114 415.2 309 68.0
AT2G41700 Arabidopsis thaliana HOM05D000610 ORTHO05D004774 7.5e-114 414.5 310 66.1
Migut.J01749 Erythranthe guttata HOM05D000610 ORTHO05D004774 4.8e-113 411.8 311 67.5
ECA247G3032 Erigeron canadensis HOM05D000610 ORTHO05D004774 8.3e-113 411.0 308 64.9
Thhalv10016127m.g Eutrema salsugineum HOM05D000610 ORTHO05D004774 1.1e-112 410.6 309 66.0
Ah.04g151590 Amaranthus hybridus HOM05D000610 ORTHO05D004774 1.4e-112 410.2 310 66.1
Sp4g23940 Schrenkiella parvula HOM05D000610 ORTHO05D004774 1.4e-112 410.2 313 65.2
MSTRG.6422 Avicennia marina HOM05D000610 ORTHO05D004774 2.4e-112 409.5 317 64.4
EL10Ac3g07101 Beta vulgaris HOM05D000610 ORTHO05D004774 2.4e-112 409.5 310 65.2
Solyc04g015970.3 Solanum lycopersicum HOM05D000610 ORTHO05D004774 9.1e-112 407.5 312 66.7
Sopen04g007980 Solanum pennellii HOM05D000610 ORTHO05D004774 9.1e-112 407.5 312 66.7
SGA_v2.0_scaffold69G23121 Striga asiatica HOM05D000610 ORTHO05D004774 5.9e-111 404.8 307 66.1
A03p23380 Brassica napus HOM05D000610 ORTHO05D004774 1.3e-110 403.7 339 60.8
Cc06_g17650 Coffea canephora HOM05D000610 ORTHO05D004774 1.1e-109 400.6 308 64.9
PSO384G3904 Papaver somniferum HOM05D000610 ORTHO05D004774 1.9e-109 399.8 305 64.3
ATR0188G019 Amborella trichopoda HOM05D000610 ORTHO05D004774 3.4e-106 389.0 331 60.4
CDE05G2711 Ceratophyllum demersum HOM05D000610 ORTHO05D004774 8.3e-105 384.4 314 62.7
MBI19_g13038_MAGBIO Magnolia biondii HOM05D000610 ORTHO05D004774 5.4e-104 381.7 310 62.6
SalBow6G6580 Salvia bowleyana HOM05D000610 ORTHO05D004774 7.0e-104 381.3 363 56.7
C03p27900 Brassica napus HOM05D000610 ORTHO05D004774 9.1e-104 380.9 292 64.4
vmacro07838 Vaccinium macrocarpon HOM05D000610 ORTHO05D004774 9.1e-104 380.9 449 49.0
SalBow6G0358 Salvia bowleyana HOM05D000610 ORTHO05D004774 5.9e-103 378.3 363 56.5
Nitab4.5_0009615g0020 Nicotiana tabacum HOM05D000610 ORTHO05D004774 1.0e-102 377.5 315 63.2
Nitab4.5_0000586g0130 Nicotiana tabacum HOM05D000610 ORTHO05D004774 2.3e-102 376.3 315 62.9
HPP92_019408 Vanilla planifolia HOM05D000610 ORTHO05D004774 1.6e-100 370.2 315 59.4
Aa31LG1G23710 Aethionema arabicum HOM05D000610 ORTHO05D004774 2.8e-100 369.4 310 61.3
AUR62026051 Chenopodium quinoa HOM05D000610 ORTHO05D004774 1.3e-97 360.5 310 59.0
Cpa.g.sc224.6 Carica papaya HOM05D000610 ORTHO05D004774 3.7e-97 359.0 248 69.8
AUR62024461 Chenopodium quinoa HOM05D000610 ORTHO05D004774 1.4e-96 357.1 310 58.4
CAN.G676.30 Capsicum annuum HOM05D000610 ORTHO05D004774 2.1e-92 343.2 249 68.3
Duzib093G2237 Durio zibethinus HOM05D000610 ORTHO05D004774 1.2e-90 337.4 223 73.5
SMO266G0031 Selaginella moellendorffii HOM05D000610 ORTHO05D004774 1.8e-83 313.5 311 52.4
SEGI_25518 Sequoiadendron giganteum HOM05D000610 ORTHO05D004774 1.5e-82 310.5 276 57.6
VMungo1383G2081 Vigna mungo HOM05D000610 ORTHO05D004774 1.1e-80 304.3 176 81.2
Psat6g119800 Pisum sativum HOM05D000610 ORTHO05D004774 1.9e-77 293.5 158 87.3
Oeu023112.1 Olea europaea HOM05D000610 ORTHO05D004774 1.4e-75 287.3 311 51.8
MD14G1075700 Malus domestica HOM05D000610 ORTHO05D004774 3.4e-74 282.7 200 69.0
Actinidia39216 Actinidia chinensis HOM05D000610 ORTHO05D004774 7.3e-69 265.0 172 70.9
unitig_8.g3505 Utricularia gibba HOM05D000610 ORTHO05D004774 2.8e-68 263.1 309 48.2
FvH4_6g24100 Fragaria vesca HOM05D000610 ORTHO05D004774 3.6e-68 262.7 169 73.4
ClCG04G003360 Citrullus lanatus HOM05D000610 ORTHO05D004774 2.4e-64 250.0 169 69.8
Duzib128G1628 Durio zibethinus HOM05D000610 ORTHO05D004774 9.9e-50 201.4 136 73.5
HPP92_019406 Vanilla planifolia HOM05D000610 ORTHO05D004774 8.4e-49 198.4 310 40.6
TAR636G2602 Trochodendron aralioides HOM05D000610 ORTHO05D004774 7.1e-48 195.3 140 70.0
VMungo1383G1299 Vigna mungo HOM05D000610 ORTHO05D004774 4.8e-44 182.6 112 83.0
QL08p004628 Quercus lobata HOM05D002167 ORTHO05D004774 7.9e-39 165.2 112 71.4
Hma1.2p1_0871F.1_g231060 Hydrangea macrophylla HOM05D000610 ORTHO05D004774 6.3e-36 155.6 114 71.9
Actinidia09320 Actinidia chinensis HOM05D000610 ORTHO05D004774 5.3e-27 125.9 89 69.7
ClCG04G003340 Citrullus lanatus HOM05D000610 ORTHO05D004774 1.8e-22 110.9 111 53.2
HPP92_019439 Vanilla planifolia HOM05D000610 ORTHO05D004774 1.0e-14 85.1 65 64.6
Actinidia05480 Actinidia chinensis HOM05D000610 ORTHO05D004774 1.8e-06 57.8 57 50.9


User provided reference genes

Program Settings