Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08431_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 6.6e-31 136.7 69 100.0
Ca_14651_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 1.9e-30 135.2 69 98.6
Medtr7g091060 Medicago truncatula HOM05D007605 ORTHO05D009572 5.2e-28 127.1 69 91.3
TPR.G18242 Trifolium pratense HOM05D007605 ORTHO05D009572 5.8e-27 123.6 70 91.4
Psat3g074320 Pisum sativum HOM05D007605 ORTHO05D009572 4.9e-26 120.6 69 87.0
Glyma.18G297600 Glycine max HOM05D007605 ORTHO05D009572 1.4e-25 119.0 69 84.1
VMungo1383G0010 Vigna mungo HOM05D003647 ORTHO05D004182 4.1e-25 117.5 67 83.6
Lj6g0016727 Lotus japonicus HOM05D007605 ORTHO05D009572 1.2e-24 115.9 69 81.2
Glyma.08G364500 Glycine max HOM05D007605 ORTHO05D009572 1.6e-24 115.5 69 81.2
Lj1g0002800 Lotus japonicus HOM05D007605 ORTHO05D009572 1.6e-24 115.5 69 81.2
Lj6g0006319 Lotus japonicus HOM05D007605 ORTHO05D009572 1.6e-24 115.5 69 81.2
Lj1g0021920 Lotus japonicus HOM05D007605 ORTHO05D009572 6.0e-24 113.6 69 79.7
RcHm_v2.0_Chr7g0232231 Rosa chinensis HOM05D007605 ORTHO05D009572 5.1e-23 110.5 69 78.3
Haze_00851 Corylus avellana HOM05D007605 ORTHO05D009572 8.6e-23 109.8 69 78.3
Cfa015674 Carpinus fangiana HOM05D007605 ORTHO05D009572 1.1e-22 109.4 69 78.3
RcHm_v2.0_Chr4g0405791 Rosa chinensis HOM05D007605 ORTHO05D009572 1.1e-22 109.4 69 76.8
FAN05G3507 Fragaria x ananassa HOM05D007605 ORTHO05D009572 1.9e-22 108.6 69 76.8
Glyma.19G073500 Glycine max HOM05D007605 ORTHO05D009572 2.5e-22 108.2 69 76.8
FAN05G0946 Fragaria x ananassa HOM05D007605 ORTHO05D009572 5.6e-22 107.1 68 75.0
FAN14G0446 Fragaria x ananassa HOM05D007605 ORTHO05D009572 5.6e-22 107.1 69 75.4
CANSAT01G0287 Cannabis sativa HOM05D007605 ORTHO05D009572 9.6e-22 106.3 69 72.5
Prupe.4G204500 Prunus persica HOM05D007605 ORTHO05D009572 1.2e-21 105.9 69 73.9
arahy.Tifrunner.gnm1.ann1.FBG7WK Arachis hypogaea HOM05D007605 ORTHO05D009572 1.6e-21 105.5 70 75.7
FvH4_6g21131 Fragaria vesca HOM05D007605 ORTHO05D009572 2.1e-21 105.1 67 74.6
MD03G1210800 Malus domestica HOM05D007605 ORTHO05D009572 2.1e-21 105.1 69 75.4
Phvul.008G005000 Phaseolus vulgaris HOM05D007605 ORTHO05D009572 3.6e-21 104.4 69 72.5
arahy.Tifrunner.gnm1.ann1.MPL0H7 Arachis hypogaea HOM05D007605 ORTHO05D009572 6.2e-21 103.6 68 75.0
Migut.N03059 Erythranthe guttata HOM05D007605 ORTHO05D009572 1.4e-20 102.4 69 71.0
Lalb_Chr04g0257371 Lupinus albus HOM05D007605 ORTHO05D009572 1.8e-20 102.1 56 85.7
MD11G1225700 Malus domestica HOM05D007605 ORTHO05D009572 2.4e-20 101.7 69 72.5
Nn1g09550 Nelumbo nucifera HOM05D007605 ORTHO05D009572 2.4e-20 101.7 67 74.6
MELO3C011854.2 Cucumis melo HOM05D007605 ORTHO05D009572 5.2e-20 100.5 61 78.7
Rhsim09G0008600 Rhododendron simsii HOM05D007605 ORTHO05D009572 5.2e-20 100.5 69 73.9
Thecc.04G164300 Theobroma cacao HOM05D007605 ORTHO05D009572 5.2e-20 100.5 69 75.4
Glyma.19G030600 Glycine max HOM05D007605 ORTHO05D009572 6.9e-20 100.1 69 72.5
SGA_v2.0_scaffold25G11005 Striga asiatica HOM05D000384 ORTHO05D009572 6.9e-20 100.1 69 68.1
Sed0018718 Sechium edule HOM05D007605 ORTHO05D009572 8.9e-20 99.8 62 75.8
Potri.019G096700 Populus trichocarpa HOM05D007605 ORTHO05D009572 1.5e-19 99.0 64 73.4
TWI63G1406 Tripterygium wilfordii HOM05D007605 ORTHO05D009572 1.5e-19 99.0 67 73.1
Potri.019G096500 Populus trichocarpa HOM05D007605 ORTHO05D009572 2.0e-19 98.6 62 74.2
DCAR_030842 Daucus carota HOM05D007605 ORTHO05D009572 2.6e-19 98.2 64 71.9
Atru.chr4.1455 Acer truncatum HOM05D007605 ORTHO05D009572 3.4e-19 97.8 59 78.0
SalBow6G4154 Salvia bowleyana HOM05D007605 ORTHO05D009572 3.4e-19 97.8 69 68.1
Sc13g0006890 Simmondsia chinensis HOM05D007605 ORTHO05D009572 3.4e-19 97.8 63 76.2
CiPaw.01G168900 Carya illinoinensis HOM05D007605 ORTHO05D009572 4.4e-19 97.4 56 82.1
Sabra19G0108500 Salix brachista HOM05D000005 ORTHO05D000012 5.8e-19 97.1 64 71.9
PGR142G0642 Punica granatum HOM05D007605 ORTHO05D009572 7.6e-19 96.7 64 71.9
Cpa.g.sc9.378 Carica papaya HOM05D007605 ORTHO05D009572 9.9e-19 96.3 69 69.6
Duzib212G0337 Durio zibethinus HOM05D007605 ORTHO05D009572 1.7e-18 95.5 69 71.0
PGSC0003DMG400016297 Solanum tuberosum HOM05D007605 ORTHO05D009572 2.2e-18 95.1 67 68.7
Sopen06g018580 Solanum pennellii HOM05D007605 ORTHO05D009572 2.9e-18 94.7 67 67.2
Carub.0004s2631 Capsella rubella HOM05D007605 ORTHO05D009572 3.8e-18 94.4 69 69.6
Nitab4.5_0004700g0030 Nicotiana tabacum HOM05D001130 ORTHO05D001052 4.9e-18 94.0 67 67.2
Peaxi162Scf00579g00018 Petunia axillaris HOM05D007605 ORTHO05D009572 4.9e-18 94.0 67 67.2
CSS0027032 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 6.4e-18 93.6 56 80.4
CSS0028313 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 6.4e-18 93.6 56 80.4
Sabra13G0106700 Salix brachista HOM05D007605 ORTHO05D009572 6.4e-18 93.6 64 68.8
Eucgr.H04449 Eucalyptus grandis HOM05D007605 ORTHO05D009572 8.4e-18 93.2 60 78.3
AL4G42650 Arabidopsis lyrata HOM05D007605 ORTHO05D009572 1.1e-17 92.8 69 69.6
COL.COLO4_38114 Corchorus olitorius HOM05D007605 ORTHO05D009572 1.1e-17 92.8 55 81.8
Nitab4.5_0007474g0060 Nicotiana tabacum HOM05D007605 ORTHO05D009572 1.1e-17 92.8 67 65.7
Atru.chr12.2308 Acer truncatum HOM05D007605 ORTHO05D009572 1.4e-17 92.4 59 74.6
Gohir.A10G144600 Gossypium hirsutum HOM05D007605 ORTHO05D009572 1.4e-17 92.4 52 84.6
Manes.05G136900 Manihot esculenta HOM05D007605 ORTHO05D009572 1.4e-17 92.4 59 71.2
Manes.08G010900 Manihot esculenta HOM05D007605 ORTHO05D009572 1.4e-17 92.4 59 71.2
AT2G43780 Arabidopsis thaliana HOM05D007605 ORTHO05D009572 1.9e-17 92.0 69 68.1
THA.LOC104802329 Tarenaya hassleriana HOM05D007605 ORTHO05D009572 1.9e-17 92.0 69 66.7
Ah.07g202920 Amaranthus hybridus HOM05D007605 ORTHO05D009572 3.2e-17 91.3 55 80.0
EL10Ac3g06103 Beta vulgaris HOM05D007605 ORTHO05D009572 3.2e-17 91.3 63 73.0
Ciclev10023247m.g Citrus clementina HOM05D007605 ORTHO05D009572 4.2e-17 90.9 59 69.5
CARHR138960 Cardamine hirsuta HOM05D007605 ORTHO05D009572 7.1e-17 90.1 69 66.7
AUR62002411 Chenopodium quinoa HOM05D007605 ORTHO05D009572 7.1e-17 90.1 60 75.0
Aqoxy4G02871 Aquilegia oxysepala HOM05D007605 ORTHO05D009572 1.2e-16 89.4 59 69.5
PSO573G0041 Papaver somniferum HOM05D007605 ORTHO05D009572 1.2e-16 89.4 59 72.9
Sp4g25850 Schrenkiella parvula HOM05D007605 ORTHO05D009572 2.7e-16 88.2 69 65.2
Os05g0103800 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 3.5e-16 87.8 58 72.4
ECA248G2718 Erigeron canadensis HOM05D007605 ORTHO05D009572 4.6e-16 87.4 55 78.2
MBI07_g11492_MAGBIO Magnolia biondii HOM05D007605 ORTHO05D009572 4.6e-16 87.4 59 74.6
Thhalv10001711m.g Eutrema salsugineum HOM05D007605 ORTHO05D009572 6.0e-16 87.0 69 66.7
Aa31LG1G25490 Aethionema arabicum HOM05D005323 ORTHO05D006820 7.8e-16 86.7 55 76.4
Os12g0611700 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 1.3e-15 85.9 58 70.7
Gohir.D10G122400 Gossypium hirsutum HOM05D007605 ORTHO05D009572 1.7e-15 85.5 53 81.1
Gorai.011G134700 Gossypium raimondii HOM05D007605 ORTHO05D009572 1.7e-15 85.5 53 81.1
BcaB05g23281 Brassica carinata HOM05D007605 ORTHO05D009572 2.3e-15 85.1 69 60.9
BcaC01g05214 Brassica carinata HOM05D007605 ORTHO05D009572 3.0e-15 84.7 69 63.8
C03p29150 Brassica napus HOM05D007605 ORTHO05D009572 3.0e-15 84.7 69 63.8
BolC3t15267H Brassica oleracea HOM05D007605 ORTHO05D009572 3.0e-15 84.7 69 63.8
ClCG11G013540 Citrullus lanatus HOM05D007605 ORTHO05D009572 3.0e-15 84.7 52 76.9
ATR0743G065 Amborella trichopoda HOM05D007605 ORTHO05D009572 3.9e-15 84.3 61 67.2
BcaB01g03362 Brassica carinata HOM05D007605 ORTHO05D009572 3.9e-15 84.3 69 63.8
Lsat_1_v5_gn_1_21060 Lactuca sativa HOM05D007605 ORTHO05D009572 5.1e-15 84.0 50 76.0
A03p24460 Brassica napus HOM05D007605 ORTHO05D009572 6.6e-15 83.6 69 63.8
A05p03980 Brassica napus HOM05D005323 ORTHO05D006820 6.6e-15 83.6 61 70.5
Glyma.17G205632 Glycine max HOM05D007605 ORTHO05D009572 1.5e-14 82.4 45 84.4
BraA03t11655Z Brassica rapa HOM05D007605 ORTHO05D009572 1.9e-14 82.0 69 62.3
BraA05t19386Z Brassica rapa HOM05D005323 ORTHO05D006820 2.5e-14 81.6 61 68.9
BcaC02g12364 Brassica carinata HOM05D005323 ORTHO05D006820 3.3e-14 81.3 55 70.9
C04p04730 Brassica napus HOM05D005323 ORTHO05D006820 3.3e-14 81.3 55 70.9
BolC4t22103H Brassica oleracea HOM05D005323 ORTHO05D006820 3.3e-14 81.3 55 70.9
BcaB02g08902 Brassica carinata HOM05D005323 ORTHO05D006820 5.6e-14 80.5 58 67.2
QL10p056550 Quercus lobata HOM05D007605 ORTHO05D009572 3.6e-13 77.8 63 63.5
CsaV3_5G030160 Cucumis sativus L. HOM05D007605 ORTHO05D009572 6.2e-13 77.0 48 75.0
GSVIVG01038176001 Vitis vinifera HOM05D007605 ORTHO05D009572 1.4e-12 75.9 54 68.5
vmacro23387 Vaccinium macrocarpon HOM05D007605 ORTHO05D009572 3.1e-12 74.7 47 76.6
Lsat_1_v5_gn_1_74540 Lactuca sativa HOM05D007605 ORTHO05D009572 5.3e-12 73.9 48 68.8
Lj6C218G0 Lonicera japonica HOM05D000384 ORTHO05D000468 9.0e-12 73.2 43 76.7
Mapoly0044s0040 Marchantia polymorpha HOM05D007605 ORTHO05D009572 4.9e-10 67.4 57 59.6
BcaC05g29066 Brassica carinata HOM05D007605 ORTHO05D009572 6.0e-08 60.5 46 60.9
Pp3c9_12740 Physcomitrium patens HOM05D007605 ORTHO05D009572 3.0e-07 58.2 57 52.6


User provided reference genes

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