Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 3.4e-275 951.0 481 100.0
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 4.5e-134 482.3 573 50.8
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 8.0e-99 365.2 636 41.5
Lalb_Chr01g0017411 Lupinus albus HOM05D007911 ORTHO05D009536 4.4e-89 332.8 627 39.6
Medtr2g012890 Medicago truncatula HOM05D007911 ORTHO05D009536 6.5e-85 318.9 604 40.2
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 3.0e-82 310.1 648 37.2
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 5.7e-81 305.8 653 36.3
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 4.9e-80 302.8 1024 28.6
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 1.2e-78 298.1 648 36.3
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 2.7e-78 297.0 645 35.8
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 1.9e-68 264.2 834 30.9
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 1.9e-60 237.7 214 60.7
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 1.8e-58 231.1 834 28.7
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 1.4e-47 194.9 148 66.2
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 9.3e-39 165.6 235 41.7
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 3.5e-38 163.7 217 41.9
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 1.3e-37 161.8 111 72.1
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 3.0e-37 160.6 230 42.2
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 3.9e-37 160.2 251 41.8
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 6.6e-37 159.5 254 39.0
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 8.7e-37 159.1 219 44.3
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.5e-36 158.3 369 31.7
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 2.5e-36 157.5 217 41.0
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 2.5e-36 157.5 206 45.6
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 1.3e-35 155.2 215 43.3
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 4.8e-35 153.3 425 28.7
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.4e-34 151.8 423 29.8
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 2.4e-34 151.0 134 56.7
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 2.4e-34 151.0 222 41.0
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 9.9e-33 145.6 107 67.3
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 1.7e-32 144.8 391 30.4
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 4.9e-32 143.3 126 55.6
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 1.9e-31 141.4 136 51.5
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 3.5e-30 137.1 148 48.0
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 7.9e-30 136.0 199 42.7
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 1.9e-28 131.3 213 41.8
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 5.6e-28 129.8 141 47.5
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 9.6e-28 129.0 585 26.5
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 1.6e-27 128.3 224 38.4
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 2.8e-27 127.5 199 39.2
Lalb_Chr25g0287301 Lupinus albus HOM05D007911 ORTHO05D009536 4.8e-27 126.7 187 45.5
FAN09G4584 Fragaria x ananassa HOM05D020102 ORTHO05D009536 5.3e-26 123.2 131 43.5
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 3.4e-25 120.6 223 35.9
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 4.5e-25 120.2 146 41.8
FvH4_6g24470 Fragaria vesca HOM05D020102 ORTHO05D009536 4.5e-25 120.2 131 43.5
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 1.7e-24 118.2 132 49.2
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 2.9e-24 117.5 206 37.4
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 2.9e-24 117.5 342 29.8
FAN14G4000 Fragaria x ananassa HOM05D020102 ORTHO05D009536 3.8e-24 117.1 131 42.0
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 3.2e-23 114.0 139 43.9
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 7.1e-23 112.8 497 27.4
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 7.9e-22 109.4 184 39.7
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 1.0e-21 109.0 139 46.0
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 8.7e-21 105.9 185 37.3
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 1.1e-20 105.5 358 27.9
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 2.5e-20 104.4 602 25.9
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 7.4e-20 102.8 110 47.3
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 1.3e-19 102.1 184 35.9
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 2.8e-19 100.9 133 44.4
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 2.4e-18 97.8 133 42.1
arahy.Tifrunner.gnm1.ann1.808QWK Arachis hypogaea HOM05D007911 ORTHO05D009536 6.9e-18 96.3 69 68.1
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 1.5e-17 95.1 98 50.0
PSO339G2888 Papaver somniferum HOM05D007911 ORTHO05D009536 2.6e-17 94.4 124 40.3
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 1.3e-16 92.0 156 38.5
FAN05G5247 Fragaria x ananassa HOM05D020102 ORTHO05D009536 2.2e-16 91.3 97 41.2
SGA_v2.0_scaffold69G23124 Striga asiatica HOM05D007911 ORTHO05D009536 6.5e-16 89.7 172 34.3
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 8.4e-16 89.4 156 36.5
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 8.4e-16 89.4 459 26.8
Sed0016742 Sechium edule HOM05D007911 ORTHO05D009536 7.1e-15 86.3 105 40.0
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 9.3e-15 85.9 140 40.0
PSO384G4398 Papaver somniferum HOM05D007911 ORTHO05D009536 9.3e-15 85.9 124 39.5
EL10Ac3g07134 Beta vulgaris HOM05D021336 ORTHO05D009536 1.2e-14 85.5 241 29.9
Aqoxy1G00297 Aquilegia oxysepala HOM05D007911 ORTHO05D009536 2.7e-14 84.3 170 36.5
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 1.0e-13 82.4 143 35.0
SGA_v2.0_scaffold105G30375 Striga asiatica HOM05D007911 ORTHO05D009536 1.3e-13 82.0 113 39.8
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 2.3e-13 81.3 128 36.7
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 6.7e-13 79.7 142 34.5
AUR62026093 Chenopodium quinoa HOM05D021336 ORTHO05D009536 2.5e-12 77.8 188 31.4
Hund24682 Selenicereus undatus HOM05D007911 ORTHO05D009536 9.6e-12 75.9 122 36.9
Hund19135 Selenicereus undatus HOM05D021336 ORTHO05D009536 1.1e-10 72.4 144 34.7
Sc13g0001600 Simmondsia chinensis HOM05D007911 ORTHO05D009536 1.8e-10 71.6 117 38.5
AUR62024506 Chenopodium quinoa HOM05D021336 ORTHO05D009536 4.1e-10 70.5 176 30.1
CsaV3_4G027600 Cucumis sativus L. HOM05D007911 ORTHO05D009536 5.3e-10 70.1 171 33.9
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 3.8e-08 63.9 192 31.8
HanXRQChr08g0234551 Helianthus annuus HOM05D007911 ORTHO05D009536 5.0e-08 63.5 101 38.6
Nitab4.5_0000677g0260 Nicotiana tabacum HOM05D029882 ORTHO05D009536 1.4e-07 62.0 105 37.1
Ah.04g151450 Amaranthus hybridus HOM05D021336 ORTHO05D009536 2.5e-07 61.2 179 28.5
ECA247G2582 Erigeron canadensis HOM05D007911 ORTHO05D009536 3.2e-07 60.8 106 34.9


User provided reference genes

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