Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 8.3e-146 520.4 271 100.0
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 1.2e-51 207.6 147 75.5
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 5.0e-50 202.2 147 74.1
Ca_20730_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.1e-48 196.8 253 53.0
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 3.4e-46 189.5 118 81.4
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 4.4e-46 189.1 323 44.0
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 5.8e-46 188.7 165 61.2
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 3.7e-45 186.0 116 81.0
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 4.9e-45 185.7 116 78.4
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 7.0e-44 181.8 123 77.2
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 7.0e-44 181.8 123 77.2
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 3.5e-43 179.5 116 75.9
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 1.3e-42 177.6 102 87.3
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 3.3e-41 172.9 132 68.9
Ca_30365_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 5.8e-38 162.2 147 66.7
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 1.6e-35 154.1 118 69.5
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 3.5e-35 152.9 118 67.8
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 6.0e-35 152.1 99 75.8
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 1.3e-34 151.0 119 68.1
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 2.3e-34 150.2 176 52.3
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 5.1e-34 149.1 132 62.1
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 6.6e-34 148.7 113 70.8
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 1.9e-33 147.1 162 52.5
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 7.3e-33 145.2 111 65.8
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 1.2e-32 144.4 133 60.9
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 2.8e-32 143.3 153 51.0
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 4.7e-32 142.5 120 63.3
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 6.2e-32 142.1 104 68.3
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 1.8e-31 140.6 161 48.4
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 2.3e-31 140.2 102 68.6
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 3.1e-31 139.8 143 53.8
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 3.1e-31 139.8 104 69.2
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 3.1e-31 139.8 187 47.6
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 4.0e-31 139.4 107 66.4
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 1.2e-30 137.9 140 54.3
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 2.0e-30 137.1 143 54.5
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 2.6e-30 136.7 121 60.3
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 3.4e-30 136.3 107 64.5
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 4.4e-30 136.0 113 62.8
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 5.8e-30 135.6 121 59.5
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 5.8e-30 135.6 135 54.1
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 7.5e-30 135.2 134 54.5
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 7.5e-30 135.2 114 57.0
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 7.5e-30 135.2 105 63.8
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 1.7e-29 134.0 104 64.4
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.2e-29 133.7 104 63.5
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 2.9e-29 133.3 107 60.7
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 2.9e-29 133.3 170 46.5
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 3.7e-29 132.9 117 59.8
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 3.7e-29 132.9 104 63.5
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 3.7e-29 132.9 113 61.9
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 4.9e-29 132.5 170 46.5
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 6.4e-29 132.1 135 53.3
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 8.3e-29 131.7 121 56.2
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 1.1e-28 131.3 107 64.5
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 1.4e-28 131.0 103 61.2
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 1.9e-28 130.6 101 63.4
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 2.4e-28 130.2 110 59.1
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 2.4e-28 130.2 147 47.6
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 2.4e-28 130.2 104 64.4
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 2.4e-28 130.2 130 55.4
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 3.2e-28 129.8 143 50.3
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 7.1e-28 128.6 107 59.8
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 9.2e-28 128.3 86 73.3
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 2.1e-27 127.1 174 44.8
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 2.1e-27 127.1 102 62.7
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 2.1e-27 127.1 102 62.7
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 2.7e-27 126.7 130 52.3
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 6.0e-27 125.6 98 64.3
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 6.0e-27 125.6 161 44.1
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 7.8e-27 125.2 113 57.5
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 1.0e-26 124.8 173 45.7
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 1.3e-26 124.4 104 60.6
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 1.7e-26 124.0 105 58.1
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 3.0e-26 123.2 111 55.9
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 3.0e-26 123.2 111 55.9
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 3.9e-26 122.9 104 61.5
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 6.6e-26 122.1 135 49.6
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 1.1e-25 121.3 103 60.2
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 1.5e-25 120.9 123 52.0
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 1.2e-24 117.9 104 56.7
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 1.2e-24 117.9 105 60.0
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 4.7e-24 115.9 101 56.4
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 4.7e-24 115.9 86 69.8
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 1.8e-23 114.0 144 43.8
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 2.4e-23 113.6 95 57.9
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 5.2e-23 112.5 82 68.3
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 6.8e-23 112.1 167 44.9
Ca_13718_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 8.9e-23 111.7 70 82.9
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 5.8e-22 109.0 86 61.6
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 5.8e-22 109.0 75 68.0
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 7.6e-22 108.6 77 68.8
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 3.8e-21 106.3 108 54.6
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 6.4e-21 105.5 106 50.9
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 2.4e-20 103.6 69 72.5
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 3.5e-19 99.8 100 51.0
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 3.5e-19 99.8 101 49.5
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 3.5e-19 99.8 101 49.5
SEGI_06354 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 6.0e-19 99.0 72 68.1
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 3.0e-18 96.7 82 63.4
RcHm_v2.0_Chr3g0484121 Rosa chinensis HOM05D005255 ORTHO05D006276 4.7e-16 89.4 63 68.3
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 3.1e-15 86.7 165 35.8
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 6.9e-15 85.5 83 53.0
vmacro09038 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 1.2e-14 84.7 63 63.5
Nitab4.5_0001618g0070 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.0e-14 84.0 78 55.1
CAN.G1237.19 Capsicum annuum HOM05D005255 ORTHO05D006276 2.6e-14 83.6 67 59.7
TAR624G0532 Trochodendron aralioides HOM05D005255 ORTHO05D006276 4.4e-14 82.8 67 58.2
Nitab4.5_0000826g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 5.8e-14 82.4 63 63.5
Sopen04g008710 Solanum pennellii HOM05D005255 ORTHO05D006276 7.6e-14 82.0 78 55.1
PGSC0003DMG400012725 Solanum tuberosum HOM05D005255 ORTHO05D006276 3.8e-13 79.7 78 52.6
MSTRG.6398 Avicennia marina HOM05D005255 ORTHO05D006276 4.9e-13 79.3 155 40.6
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 6.4e-13 79.0 74 54.1
unitig_8.g3497 Utricularia gibba HOM05D005255 ORTHO05D006276 5.4e-12 75.9 74 54.1
SEGI_00937 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 1.3e-10 71.2 83 42.2
BolSC21t60285H Brassica oleracea HOM05D005255 ORTHO05D021741 1.1e-09 68.2 89 39.3
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 4.3e-09 66.2 49 65.3
BcaB04g19772 Brassica carinata HOM05D005255 ORTHO05D021741 2.8e-08 63.5 66 47.0
C03p67440 Brassica napus HOM05D005255 ORTHO05D021741 3.1e-07 60.1 49 55.1
vmacro09036 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 4.0e-07 59.7 36 77.8
FAN14G4897 Fragaria x ananassa HOM05D005255 ORTHO05D006276 6.9e-07 58.9 57 52.6
C03p67420 Brassica napus HOM05D005255 ORTHO05D021741 1.5e-06 57.8 57 47.4
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 2.0e-06 57.4 45 60.0
unitig_8.g3496 Utricularia gibba HOM05D005255 ORTHO05D006276 4.5e-06 56.2 37 75.7
Lsat_1_v5_gn_5_6521 Lactuca sativa HOM05D005255 ORTHO05D006276 5.8e-06 55.8 67 41.8
Lsat_1_v5_gn_8_83120 Lactuca sativa HOM05D005255 ORTHO05D006276 5.8e-06 55.8 67 41.8
MELO3C034260.2 Cucumis melo HOM05D000018 ORTHO05D001766 9.9e-06 55.1 49 57.1


User provided reference genes

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