Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08423_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 2.4e-273 944.9 476 100.0
Medtr7g090680 Medicago truncatula HOM05D005255 ORTHO05D006276 5.3e-228 794.3 560 74.5
TPR.G32740 Trifolium pratense HOM05D005255 ORTHO05D006276 3.7e-213 745.0 603 68.0
Psat3g075800 Pisum sativum HOM05D005255 ORTHO05D006276 6.7e-207 724.2 548 71.4
Lj1g0022872 Lotus japonicus HOM05D005255 ORTHO05D006276 5.9e-195 684.5 565 66.4
Glyma.03G132200 Glycine max HOM05D005255 ORTHO05D006276 5.0e-194 681.4 564 66.7
Glyma.19G134000 Glycine max HOM05D005255 ORTHO05D006276 1.5e-187 659.8 554 66.1
arahy.Tifrunner.gnm1.ann1.5V2BX3 Arachis hypogaea HOM05D005255 ORTHO05D006276 1.0e-183 647.1 566 62.7
arahy.Tifrunner.gnm1.ann1.FQMP84 Arachis hypogaea HOM05D005255 ORTHO05D006276 2.6e-182 642.5 566 62.5
Lalb_Chr25g0287041 Lupinus albus HOM05D005255 ORTHO05D006276 1.8e-180 636.3 567 62.4
Phvul.001G128100 Phaseolus vulgaris HOM05D005255 ORTHO05D006276 6.3e-173 611.3 560 61.2
VMungo1383G2357 Vigna mungo HOM05D005255 ORTHO05D006276 5.3e-172 608.2 560 60.7
VMungo1383G1524 Vigna mungo HOM05D005255 ORTHO05D006276 1.5e-150 537.0 568 55.1
QL07p004453 Quercus lobata HOM05D005255 ORTHO05D006276 5.9e-147 525.0 581 51.5
CiPaw.09G042700 Carya illinoinensis HOM05D005255 ORTHO05D006276 1.7e-146 523.5 580 52.6
Haze_19754 Corylus avellana HOM05D005255 ORTHO05D006276 3.9e-146 522.3 580 52.4
Prupe.7G049600 Prunus persica HOM05D005255 ORTHO05D006276 1.5e-142 510.4 583 51.3
Cfa016749 Carpinus fangiana HOM05D005255 ORTHO05D006276 3.4e-142 509.2 580 51.7
Atru.chr1.1248 Acer truncatum HOM05D005255 ORTHO05D006276 9.2e-140 501.1 572 50.3
Manes.09G016500 Manihot esculenta HOM05D005255 ORTHO05D006276 9.2e-140 501.1 582 49.3
Manes.09G016721 Manihot esculenta HOM05D005255 ORTHO05D006276 4.6e-139 498.8 581 49.7
Duzib093G1389 Durio zibethinus HOM05D005255 ORTHO05D006276 8.6e-138 494.6 517 54.7
Rhsim04G0108300 Rhododendron simsii HOM05D005255 ORTHO05D006276 3.3e-137 492.7 557 50.6
GSVIVG01033557001 Vitis vinifera HOM05D005255 ORTHO05D006276 4.3e-137 492.3 558 52.2
ClCG04G003970 Citrullus lanatus HOM05D005255 ORTHO05D006276 2.1e-136 490.0 575 48.7
Thecc.05G144600 Theobroma cacao HOM05D005255 ORTHO05D006276 3.6e-136 489.2 528 52.5
RcHm_v2.0_Chr3g0484561 Rosa chinensis HOM05D005255 ORTHO05D006276 4.7e-136 488.8 514 54.7
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 4.7e-136 488.8 587 49.7
Lj1C1121T6 Lonicera japonica HOM05D005255 ORTHO05D006276 8.1e-136 488.0 555 50.5
CSS0035930 Camellia sinensis var. sinensis HOM05D005255 ORTHO05D006276 6.8e-135 485.0 583 48.7
Eucgr.A02293 Eucalyptus grandis HOM05D005255 ORTHO05D006276 8.9e-135 484.6 577 48.9
CANSAT80G0695 Cannabis sativa HOM05D005255 ORTHO05D006276 5.8e-134 481.9 586 47.6
COL.COLO4_21290 Corchorus olitorius HOM05D005255 ORTHO05D006276 5.8e-134 481.9 512 52.7
Lj1A1118T28 Lonicera japonica HOM05D005255 ORTHO05D006276 7.5e-134 481.5 555 50.1
TWI74G1492 Tripterygium wilfordii HOM05D005255 ORTHO05D006276 2.2e-133 479.9 560 49.3
Potri.006G045100 Populus trichocarpa HOM05D005255 ORTHO05D006276 2.9e-133 479.6 575 49.0
Sed0023795 Sechium edule HOM05D005255 ORTHO05D006276 3.7e-133 479.2 578 46.9
Actinidia38145 Actinidia chinensis HOM05D005255 ORTHO05D006276 4.9e-133 478.8 584 48.8
CANSAT80G1558 Cannabis sativa HOM05D005255 ORTHO05D006276 6.4e-133 478.4 586 47.4
Peaxi162Scf00130g01019 Petunia axillaris HOM05D005255 ORTHO05D006276 5.1e-130 468.8 547 48.3
Migut.J01697 Erythranthe guttata HOM05D005255 ORTHO05D006276 3.3e-129 466.1 550 50.2
CAN.G1237.20 Capsicum annuum HOM05D005255 ORTHO05D006276 9.5e-129 464.5 550 47.6
PSO339G5261 Papaver somniferum HOM05D005255 ORTHO05D006276 1.6e-128 463.8 589 45.8
Cc06_g18410 Coffea canephora HOM05D005255 ORTHO05D006276 2.8e-128 463.0 580 45.9
Ciclev10006800m.g Citrus clementina HOM05D005255 ORTHO05D006276 6.2e-128 461.8 498 52.8
Dinv30292 Davidia involucrata HOM05D005255 ORTHO05D006276 1.1e-127 461.1 584 48.8
HanXRQChr06g0176811 Helianthus annuus HOM05D005255 ORTHO05D006276 1.4e-127 460.7 494 50.6
ECA236G0023 Erigeron canadensis HOM05D005255 ORTHO05D006276 2.3e-127 459.9 532 48.1
SalBow6G4730 Salvia bowleyana HOM05D005255 ORTHO05D006276 2.3e-127 459.9 556 47.7
Lsat_1_v5_gn_8_83080 Lactuca sativa HOM05D005255 ORTHO05D006276 4.4e-126 455.7 517 49.9
Sopen04g008740 Solanum pennellii HOM05D005255 ORTHO05D006276 4.4e-126 455.7 548 47.8
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 7.6e-126 454.9 575 48.0
Solyc04g017650.4 Solanum lycopersicum HOM05D005255 ORTHO05D006276 9.9e-126 454.5 551 48.5
AUR62030394 Chenopodium quinoa HOM05D005255 ORTHO05D006276 2.9e-125 453.0 533 48.6
AT2G41450 Arabidopsis thaliana HOM05D005255 ORTHO05D006276 1.1e-124 451.1 527 48.0
Nn7g36447 Nelumbo nucifera HOM05D005255 ORTHO05D006276 5.4e-124 448.7 601 45.1
A05p02290 Brassica napus HOM05D005255 ORTHO05D006276 2.1e-123 446.8 493 48.5
BraA05t19224Z Brassica rapa HOM05D005255 ORTHO05D006276 1.7e-122 443.7 493 48.3
Ah.13g076740 Amaranthus hybridus HOM05D005255 ORTHO05D006276 6.6e-122 441.8 513 47.4
Thhalv10016390m.g Eutrema salsugineum HOM05D005255 ORTHO05D006276 1.1e-121 441.0 543 46.6
Aqoxy2G00272 Aquilegia oxysepala HOM05D005255 ORTHO05D006276 1.5e-121 440.7 621 43.8
PGR031G1801 Punica granatum HOM05D005255 ORTHO05D006276 2.5e-121 439.9 578 43.4
Aa31LG1G23460 Aethionema arabicum HOM05D005255 ORTHO05D006276 3.3e-121 439.5 526 45.8
CARHR136560 Cardamine hirsuta HOM05D005255 ORTHO05D006276 2.1e-120 436.8 531 47.6
EL10Ac3g07169 Beta vulgaris HOM05D005255 ORTHO05D006276 2.8e-120 436.4 537 46.6
THA.LOC104817056 Tarenaya hassleriana HOM05D005255 ORTHO05D006276 6.2e-120 435.3 560 47.0
Hund24659 Selenicereus undatus HOM05D005255 ORTHO05D006276 8.1e-120 434.9 548 44.7
C04p02730 Brassica napus HOM05D005255 ORTHO05D006276 1.4e-119 434.1 495 48.1
BolC4t21913H Brassica oleracea HOM05D005255 ORTHO05D006276 1.4e-119 434.1 495 48.1
DCAR_020535 Daucus carota HOM05D005255 ORTHO05D006276 1.4e-119 434.1 554 45.3
Carub.0004s2374 Capsella rubella HOM05D005255 ORTHO05D006276 1.8e-119 433.7 528 46.2
AUR62026140 Chenopodium quinoa HOM05D005255 ORTHO05D006276 3.1e-119 433.0 564 45.7
BcaC02g12783 Brassica carinata HOM05D005255 ORTHO05D006276 4.0e-119 432.6 500 47.6
MELO3C014208.2 Cucumis melo HOM05D005255 ORTHO05D006276 4.0e-119 432.6 574 44.6
Nitab4.5_0005195g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 1.2e-118 431.0 551 46.8
CDE08G0636 Ceratophyllum demersum HOM05D005255 ORTHO05D006276 2.0e-118 430.3 526 46.0
AL4G39520 Arabidopsis lyrata HOM05D005255 ORTHO05D006276 1.3e-117 427.6 530 45.8
Sp4g23710 Schrenkiella parvula HOM05D005255 ORTHO05D006276 1.7e-117 427.2 545 45.9
Zm00001eb286800 Zea mays HOM05D005255 ORTHO05D006276 6.6e-114 415.2 509 45.2
TAR623G1148 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.5e-113 414.1 544 45.8
SGA_v2.0_scaffold105G30345 Striga asiatica HOM05D005255 ORTHO05D006276 4.8e-112 409.1 570 44.4
MBI19_g17528_MAGBIO Magnolia biondii HOM05D005255 ORTHO05D006276 8.1e-112 408.3 646 40.2
Os05g0376600 Oryza sativa ssp. japonica HOM05D005255 ORTHO05D006276 8.4e-109 398.3 530 43.6
Nitab4.5_0011420g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 9.3e-108 394.8 612 40.4
Ca_20730_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.4e-103 380.9 340 65.0
ATR0721G141 Amborella trichopoda HOM05D005255 ORTHO05D006276 1.5e-102 377.5 689 36.9
HPP92_003251 Vanilla planifolia HOM05D005255 ORTHO05D006276 3.5e-99 366.3 483 42.4
TAR624G0617 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.0e-93 348.2 521 41.7
Cpa.g.sc120.15 Carica papaya HOM05D005255 ORTHO05D006276 1.5e-89 334.3 527 41.0
FvH4_6g24820 Fragaria vesca HOM05D005255 ORTHO05D006276 1.4e-84 317.8 385 48.8
Ca_13718_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.2e-83 314.7 186 87.6
TAR623G1440 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.8e-82 310.8 473 41.2
Ca_30365_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 1.5e-73 281.2 219 71.7
RcHm_v2.0_Chr3g0484121 Rosa chinensis HOM05D005255 ORTHO05D006276 5.0e-69 266.2 183 71.0
CAN.G1237.18 Capsicum annuum HOM05D005255 ORTHO05D006276 8.5e-69 265.4 442 38.0
AagrBONN_evm.TU.Sc2ySwM_228.5074 Anthoceros agrestis HOM05D005255 ORTHO05D006276 1.1e-68 265.0 781 28.0
PGSC0003DMG400012725 Solanum tuberosum HOM05D005255 ORTHO05D006276 3.9e-66 256.5 183 66.1
Sc13g0001470 Simmondsia chinensis HOM05D005255 ORTHO05D006276 4.4e-65 253.1 298 49.7
MSTRG.6398 Avicennia marina HOM05D005255 ORTHO05D006276 5.3e-63 246.1 176 68.8
CsaV3_4G021950 Cucumis sativus L. HOM05D005255 ORTHO05D006276 2.6e-62 243.8 155 72.9
FAN14G1086 Fragaria x ananassa HOM05D005255 ORTHO05D006276 2.6e-62 243.8 297 49.8
Pp3c8_2040 Physcomitrium patens HOM05D005255 ORTHO05D006276 3.2e-60 236.9 731 27.2
unitig_8.g3497 Utricularia gibba HOM05D005255 ORTHO05D006276 6.7e-58 229.2 207 57.0
Nitab4.5_0000826g0020 Nicotiana tabacum HOM05D005255 ORTHO05D006276 3.7e-56 223.4 183 61.7
vmacro09038 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 1.5e-49 201.4 145 64.8
Pp3c4_1630 Physcomitrium patens HOM05D005255 ORTHO05D006276 7.5e-49 199.1 845 24.1
Pp3c4_1631 Physcomitrium patens HOM05D005255 ORTHO05D006276 7.5e-49 199.1 845 24.1
SEGI_00937 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 1.3e-48 198.4 177 53.1
Ca_08424_v3 Cicer arietinum L. HOM05D005255 ORTHO05D006276 3.5e-46 190.3 323 44.0
Mapoly0085s0026 Marchantia polymorpha HOM05D005255 ORTHO05D006276 8.0e-43 179.1 200 44.5
PGSC0003DMG400012726 Solanum tuberosum HOM05D005255 ORTHO05D006276 1.5e-41 174.9 155 55.5
HPP92_003249 Vanilla planifolia HOM05D005255 ORTHO05D006276 2.8e-40 170.6 300 36.7
Nitab4.5_0001618g0070 Nicotiana tabacum HOM05D005255 ORTHO05D006276 2.7e-38 164.1 124 65.3
Sopen04g008710 Solanum pennellii HOM05D005255 ORTHO05D006276 2.3e-37 161.0 124 65.3
SMO364G0001 Selaginella moellendorffii HOM05D005255 ORTHO05D006276 2.5e-36 157.5 455 28.8
RcHm_v2.0_Chr3g0484111 Rosa chinensis HOM05D005255 ORTHO05D006276 1.5e-33 148.3 137 59.9
FAN02G3622 Fragaria x ananassa HOM05D005255 ORTHO05D006276 3.4e-33 147.1 327 36.7
MSTRG.6397 Avicennia marina HOM05D005255 ORTHO05D006276 1.0e-29 135.6 220 41.4
TAR628G1157 Trochodendron aralioides HOM05D005255 ORTHO05D006276 2.5e-28 131.0 81 70.4
FAN14G4897 Fragaria x ananassa HOM05D005255 ORTHO05D006276 1.6e-27 128.3 137 49.6
SEGI_13590 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.8e-26 122.9 94 56.4
unitig_8.g3496 Utricularia gibba HOM05D005255 ORTHO05D006276 1.5e-25 121.7 262 37.0
vmacro09036 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 1.5e-25 121.7 80 68.8
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 3.7e-24 117.1 65 80.0
RcHm_v2.0_Chr1g0374991 Rosa chinensis HOM05D005255 ORTHO05D006276 4.9e-24 116.7 69 76.8
SEGI_39771 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 2.0e-22 111.3 96 53.1
Lsat_1_v5_gn_8_83120 Lactuca sativa HOM05D005255 ORTHO05D006276 3.5e-22 110.5 178 36.5
Nitab4.5_0000826g0030 Nicotiana tabacum HOM05D005255 ORTHO05D006276 7.3e-20 102.8 60 73.3
vmacro09037 Vaccinium macrocarpon HOM05D005255 ORTHO05D006276 3.6e-19 100.5 261 34.9
Lsat_1_v5_gn_5_6521 Lactuca sativa HOM05D005255 ORTHO05D006276 1.1e-18 99.0 92 51.1
SEGI_06354 Sequoiadendron giganteum HOM05D005255 ORTHO05D006276 5.2e-18 96.7 69 69.6
CBR_g18722 Chara braunii HOM05D002556 ORTHO05D003153 8.3e-16 89.4 179 30.2
SEGI_33554 Sequoiadendron giganteum HOM05D002556 ORTHO05D003153 5.4e-15 86.7 185 29.7
TAR624G0532 Trochodendron aralioides HOM05D005255 ORTHO05D006276 1.6e-14 85.1 65 61.5
CAN.G1237.19 Capsicum annuum HOM05D005255 ORTHO05D006276 2.1e-14 84.7 63 65.1
CsaV3_7G028290 Cucumis sativus L. HOM05D002556 ORTHO05D003153 4.6e-14 83.6 181 28.7
MELO3C015893.2 Cucumis melo HOM05D002556 ORTHO05D003153 1.7e-13 81.6 181 28.2
Eucgr.L01602 Eucalyptus grandis HOM05D002556 ORTHO05D003153 3.0e-13 80.9 182 26.9
Actinidia23440 Actinidia chinensis HOM05D002556 ORTHO05D003153 5.1e-13 80.1 182 28.0
ClCG09G006520 Citrullus lanatus HOM05D002556 ORTHO05D003153 1.9e-12 78.2 187 28.9
MSTRG.24773 Avicennia marina HOM05D002556 ORTHO05D003153 1.6e-11 75.1 182 26.4
PSO447G0225 Papaver somniferum HOM05D002556 ORTHO05D003153 2.1e-11 74.7 218 26.1
Migut.N00129 Erythranthe guttata HOM05D002556 ORTHO05D003153 4.7e-11 73.6 190 25.8
arahy.Tifrunner.gnm1.ann1.CR3TYE Arachis hypogaea HOM05D002556 ORTHO05D003153 8.1e-11 72.8 180 26.1
PSO210G2558 Papaver somniferum HOM05D002556 ORTHO05D003153 8.1e-11 72.8 182 26.4
SMO119G0101 Selaginella moellendorffii HOM05D002556 ORTHO05D003153 8.1e-11 72.8 175 26.9
arahy.Tifrunner.gnm1.ann1.I12U39 Arachis hypogaea HOM05D002556 ORTHO05D003153 1.1e-10 72.4 180 26.1
HanXRQChr13g0410841 Helianthus annuus HOM05D002556 ORTHO05D003153 1.4e-10 72.0 184 27.7
Hma1.2p1_0209F.1_g089150 Hydrangea macrophylla HOM05D002556 ORTHO05D003153 1.4e-10 72.0 187 26.2
Pp3c12_23820 Physcomitrium patens HOM05D005255 ORTHO05D006276 1.8e-10 71.6 135 34.1
CAN.G1006.25 Capsicum annuum HOM05D002556 ORTHO05D003153 2.4e-10 71.2 177 26.0
Duzib212G1036 Durio zibethinus HOM05D002556 ORTHO05D003153 3.1e-10 70.9 182 27.5
SalBow5G3083 Salvia bowleyana HOM05D002556 ORTHO05D003153 3.1e-10 70.9 185 26.5
SalBow5G3428 Salvia bowleyana HOM05D002556 ORTHO05D003153 3.1e-10 70.9 185 26.5
CsaV3_6G005660 Cucumis sativus L. HOM05D002556 ORTHO05D003153 1.2e-09 68.9 189 25.4
Gohir.A02G045500 Gossypium hirsutum HOM05D002556 ORTHO05D003153 1.2e-09 68.9 188 27.7
Gorai.005G056800 Gossypium raimondii HOM05D002556 ORTHO05D003153 1.2e-09 68.9 188 27.7
Potri.014G135520 Populus trichocarpa HOM05D002556 ORTHO05D003153 1.2e-09 68.9 187 25.7
Rhsim01G0279800 Rhododendron simsii HOM05D002556 ORTHO05D003153 1.2e-09 68.9 197 23.9
Hund20629 Selenicereus undatus HOM05D002556 ORTHO05D003153 1.5e-09 68.6 182 25.8
AUR62042844 Chenopodium quinoa HOM05D002556 ORTHO05D003153 9.9e-09 65.9 178 23.6
AUR62040727 Chenopodium quinoa HOM05D002556 ORTHO05D003153 9.2e-07 59.3 206 21.4
Sed0003402 Sechium edule HOM05D002556 ORTHO05D003153 9.2e-07 59.3 122 27.9


User provided reference genes

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