Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 0.0e+00 1449.1 719 100.0
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 0.0e+00 1270.0 719 87.1
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 0.0e+00 1250.3 719 86.5
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 0.0e+00 1149.8 719 78.9
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 0.0e+00 1146.0 716 78.5
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 0.0e+00 1133.6 719 77.7
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 0.0e+00 1132.1 716 78.4
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 0.0e+00 1094.7 717 77.0
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 8.1e-273 943.7 532 86.8
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 2.7e-268 928.7 771 64.3
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 6.6e-267 924.1 777 63.6
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 9.1e-224 780.8 745 54.9
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 1.5e-221 773.5 717 56.2
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 6.1e-220 768.1 741 54.7
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 2.4e-216 756.1 719 55.6
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 3.2e-213 745.7 717 54.8
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 1.8e-211 740.0 718 54.9
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 4.0e-211 738.8 724 54.1
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 1.3e-209 733.8 714 53.6
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 6.3e-209 731.5 718 54.9
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 1.8e-208 729.9 716 55.0
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 2.4e-208 729.6 718 53.1
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 2.4e-208 729.6 719 54.7
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 3.1e-208 729.2 719 54.1
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 9.1e-208 727.6 721 52.7
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 2.7e-207 726.1 716 54.3
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.0e-206 724.2 722 53.9
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.3e-206 723.8 721 53.7
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 3.8e-206 722.2 722 52.8
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 3.8e-206 722.2 725 53.7
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 3.2e-205 719.2 714 52.8
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 4.2e-205 718.8 718 54.0
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 3.4e-202 709.1 718 52.9
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 2.0e-199 699.9 657 55.9
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 4.4e-194 682.2 724 50.8
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 9.8e-194 681.0 721 50.5
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 1.3e-193 680.6 717 51.3
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 4.1e-192 675.6 697 52.5
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 1.2e-191 674.1 725 50.9
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 7.8e-191 671.4 715 50.5
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 2.3e-190 669.8 717 50.2
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 2.9e-190 669.5 659 52.2
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 1.1e-189 667.5 716 50.4
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 4.4e-186 655.6 533 61.9
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.0e-183 646.7 532 61.7
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 2.7e-183 646.4 724 48.5
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 2.7e-183 646.4 720 49.0
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 6.0e-183 645.2 722 49.4
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 4.7e-180 635.6 538 60.2
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 1.4e-179 634.0 716 48.0
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 1.8e-179 633.6 719 47.8
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 8.9e-179 631.3 717 48.4
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 4.9e-177 625.5 725 46.5
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 9.2e-176 621.3 724 46.5
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 2.1e-175 620.2 719 47.4
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 3.5e-175 619.4 718 47.6
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 4.6e-175 619.0 368 84.2
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 6.0e-175 618.6 724 46.5
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 1.7e-174 617.1 715 47.7
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 1.7e-174 617.1 718 47.8
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 1.7e-174 617.1 718 47.8
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 3.0e-174 616.3 715 48.1
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 4.3e-173 612.5 717 47.1
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 4.3e-173 612.5 728 47.0
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 4.3e-173 612.5 720 47.4
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 1.8e-171 607.1 720 46.5
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 3.1e-171 606.3 724 45.6
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 4.0e-171 605.9 719 46.0
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 4.0e-171 605.9 653 49.8
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 2.6e-170 603.2 736 46.1
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 1.1e-168 597.8 656 49.2
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 1.7e-166 590.5 693 47.2
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 1.1e-163 581.3 740 45.5
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 6.8e-163 578.6 775 42.3
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 8.9e-163 578.2 680 46.9
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 2.0e-162 577.0 654 47.7
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 5.8e-162 575.5 654 47.7
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 1.1e-160 571.2 723 47.0
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 3.2e-160 569.7 681 47.0
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 3.5e-159 566.2 736 43.9
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 2.5e-157 560.1 546 54.2
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 4.3e-157 559.3 681 47.3
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 9.0e-155 551.6 656 47.1
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 9.0e-155 551.6 747 43.0
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 1.5e-154 550.8 723 43.8
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 1.7e-153 547.4 531 53.9
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 2.2e-153 547.0 532 53.6
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 5.4e-152 542.3 533 53.7
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 7.1e-152 542.0 540 53.3
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 6.6e-150 535.4 540 51.5
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 1.9e-149 533.9 545 51.7
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 5.6e-149 532.3 688 43.9
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 3.8e-145 519.6 562 49.6
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 1.2e-143 514.6 685 44.1
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 6.7e-142 508.8 743 40.2
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 1.6e-135 487.6 696 42.0
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.8e-132 476.9 507 51.9
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 3.0e-126 456.8 679 42.0
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 3.0e-126 456.8 735 38.5
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 2.1e-111 407.5 444 49.3
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.0e-110 405.2 725 34.8
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 3.1e-107 393.7 571 41.9
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.7e-105 387.9 459 47.1
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 2.2e-100 370.9 506 44.3
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.1e-99 368.6 647 37.7
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 3.5e-98 363.6 293 64.2
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 6.5e-97 359.4 716 34.8
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 2.6e-77 294.3 740 31.8
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 1.1e-72 278.9 740 30.3
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 1.5e-69 268.5 230 62.6
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 4.1e-67 260.4 672 32.1
Glyma.19G133702 Glycine max HOM05D005891 ORTHO05D007214 7.0e-67 259.6 263 54.4
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.7e-58 231.1 237 56.1
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 3.0e-57 227.6 202 57.4
MD07G1151500 Malus domestica HOM05D005891 ORTHO05D007214 7.8e-50 203.0 229 52.8
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 1.7e-49 201.8 515 29.1
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 9.6e-48 196.1 209 49.8
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 1.6e-47 195.3 148 68.2
QL07p005099 Quercus lobata HOM05D005891 ORTHO05D007214 2.1e-39 168.3 141 66.0
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 9.0e-38 162.9 254 38.6
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 1.8e-33 148.7 216 42.6
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 2.2e-28 131.7 147 46.3
Cfa022822 Carpinus fangiana HOM05D005891 ORTHO05D007214 1.6e-23 115.5 283 32.2
CSS0027694 Camellia sinensis var. sinensis HOM05D005891 ORTHO05D007214 4.0e-22 110.9 105 50.5
Actinidia39189 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.2e-18 99.4 117 43.6
FAN02G2483 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.5e-16 91.7 90 44.4
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 3.1e-14 84.7 258 28.7
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 3.1e-14 84.7 258 28.7
Actinidia39187 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.6e-10 72.4 67 44.8
Cpa.g.sc66.72 Carica papaya HOM05D005891 ORTHO05D007214 1.6e-10 72.4 70 55.7
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 5.7e-08 63.9 92 40.2


User provided reference genes

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