Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 2.8e-106 388.7 197 100.0
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 1.0e-97 360.1 197 91.9
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 7.5e-96 354.0 197 90.9
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 9.2e-94 347.1 197 88.8
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 1.1e-89 333.6 197 82.2
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 4.6e-85 318.2 198 80.3
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 1.0e-84 317.0 197 80.2
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 1.7e-84 316.2 197 79.2
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 2.3e-81 305.8 197 77.2
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 1.9e-70 269.6 196 70.4
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 7.1e-70 267.7 196 69.9
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 1.3e-66 256.9 194 65.5
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 2.9e-63 245.7 195 64.6
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 4.9e-63 245.0 197 63.5
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 6.4e-63 244.6 197 63.5
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 6.4e-63 244.6 197 62.9
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 3.2e-62 242.3 197 62.9
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.2e-62 242.3 197 65.0
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 5.4e-62 241.5 197 63.5
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 9.3e-62 240.7 197 61.9
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 3.0e-60 235.7 197 60.4
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 5.1e-60 235.0 197 61.4
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 1.5e-59 233.4 197 61.4
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 1.9e-59 233.0 196 61.7
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 4.3e-59 231.9 196 61.2
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 7.3e-59 231.1 200 60.0
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 2.8e-58 229.2 197 61.4
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 3.6e-58 228.8 201 60.7
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 6.2e-58 228.0 196 60.7
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 6.2e-58 228.0 196 60.7
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 3.4e-56 222.2 197 58.9
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 7.6e-56 221.1 172 62.2
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 2.2e-55 219.5 195 58.5
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 2.2e-55 219.5 195 55.9
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 6.4e-55 218.0 195 57.9
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 8.4e-55 217.6 197 60.9
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 1.9e-54 216.5 197 56.3
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 1.9e-54 216.5 194 55.7
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 3.2e-54 215.7 197 59.9
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 1.2e-53 213.8 197 55.3
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 1.6e-53 213.4 195 56.9
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 3.5e-53 212.2 203 57.1
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 3.5e-53 212.2 197 59.9
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 4.6e-53 211.8 195 57.4
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 6.0e-53 211.5 197 59.4
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 6.0e-53 211.5 196 55.1
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 1.8e-52 209.9 197 58.9
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 3.0e-52 209.1 193 57.5
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 5.1e-52 208.4 198 54.5
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 1.9e-51 206.5 197 55.8
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.5e-51 206.1 203 57.6
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 3.3e-51 205.7 195 55.4
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 4.3e-51 205.3 196 56.1
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 4.3e-51 205.3 196 56.1
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 9.6e-51 204.1 195 55.9
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 2.1e-50 203.0 195 54.9
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 2.8e-50 202.6 194 55.7
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 3.7e-50 202.2 197 55.3
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 4.8e-50 201.8 195 54.9
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 1.4e-49 200.3 194 55.7
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 1.4e-49 200.3 194 55.7
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 1.4e-49 200.3 195 54.9
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 1.4e-49 200.3 200 55.0
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.8e-49 199.9 198 52.5
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 4.0e-49 198.7 197 51.8
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 6.9e-49 198.0 207 55.6
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 9.0e-49 197.6 193 54.4
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 1.2e-48 197.2 201 55.7
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 1.2e-48 197.2 195 54.9
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 2.6e-48 196.1 211 51.2
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 3.4e-48 195.7 197 48.7
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 3.4e-48 195.7 200 53.0
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 4.5e-48 195.3 197 52.8
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 1.0e-47 194.1 197 52.3
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 2.2e-47 193.0 193 53.9
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 6.5e-47 191.4 196 50.5
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 4.2e-46 188.7 197 50.8
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 3.5e-45 185.7 222 48.6
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 6.0e-45 184.9 223 48.4
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 6.0e-45 184.9 197 52.8
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 1.0e-44 184.1 196 51.5
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 2.3e-44 183.0 142 62.0
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 1.1e-43 180.6 197 48.7
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 1.9e-43 179.9 153 62.1
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 3.3e-43 179.1 210 52.4
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 1.3e-42 177.2 197 49.2
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 8.2e-42 174.5 194 49.5
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.8e-41 173.3 202 50.5
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 5.5e-38 161.8 196 49.5
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 3.5e-37 159.1 198 44.4
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 2.5e-35 152.9 195 51.8
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 2.8e-34 149.4 283 37.8
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 6.3e-34 148.3 168 47.0
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 8.2e-34 147.9 194 43.8
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 6.9e-33 144.8 224 43.8
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 2.6e-32 142.9 173 49.1
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 2.6e-32 142.9 195 41.5
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 4.5e-32 142.1 197 42.1
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 5.9e-32 141.7 166 48.8
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 7.7e-32 141.4 87 70.1
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 1.0e-31 141.0 171 50.3
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 1.1e-30 137.5 216 43.5
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 7.9e-29 131.3 252 37.3
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.0e-28 131.0 73 75.3
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 3.0e-28 129.4 75 72.0
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 7.4e-27 124.8 196 39.8
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 2.2e-26 123.2 153 49.7
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 4.8e-26 122.1 138 47.8
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 1.1e-25 120.9 274 33.2
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 1.1e-25 120.9 83 65.1
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 1.8e-25 120.2 274 32.1
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 4.1e-25 119.0 197 36.0
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 5.3e-25 118.6 148 48.0
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 5.9e-24 115.2 194 34.5
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 1.6e-21 107.1 203 35.5
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 2.0e-19 100.1 195 36.4
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 3.3e-19 99.4 195 33.8
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 3.7e-18 95.9 95 55.8
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 2.2e-15 86.7 106 49.1
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 3.6e-13 79.3 103 48.5
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.1e-09 67.8 167 31.1
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 1.6e-08 63.9 45 73.3
BcaC05g24595 Brassica carinata HOM05D006082 ORTHO05D007616 3.8e-07 59.3 81 49.4
CAN.G34.12 Capsicum annuum HOM05D006082 ORTHO05D007616 3.8e-07 59.3 93 41.9
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 5.5e-06 55.5 80 46.2


User provided reference genes

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