Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 2.2e-137 492.3 249 100.0
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 4.0e-102 375.2 264 78.8
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 2.3e-94 349.4 270 71.9
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 9.2e-83 310.8 267 68.5
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 5.4e-59 231.9 299 50.2
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 1.2e-58 230.7 294 48.6
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 4.6e-58 228.8 273 54.6
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 5.1e-57 225.3 288 50.7
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 2.5e-56 223.0 269 52.8
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 3.3e-56 222.6 282 51.4
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 5.6e-56 221.9 281 50.9
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 9.6e-56 221.1 292 52.1
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 1.3e-55 220.7 301 47.2
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 1.3e-55 220.7 292 50.7
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 2.8e-55 219.5 288 49.7
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 9.0e-54 214.5 299 47.8
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 5.8e-53 211.8 274 50.7
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 7.6e-53 211.5 304 47.0
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 7.6e-53 211.5 288 47.2
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 2.2e-52 209.9 308 43.5
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 2.9e-52 209.5 252 49.6
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 1.9e-51 206.8 286 48.6
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 2.4e-51 206.5 254 52.0
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 3.2e-51 206.1 288 46.5
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 5.5e-51 205.3 249 50.6
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 9.3e-51 204.5 287 46.3
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 1.6e-50 203.8 295 47.5
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 6.0e-50 201.8 296 48.0
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 6.0e-50 201.8 307 43.3
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 6.0e-50 201.8 307 43.3
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 7.9e-50 201.4 286 45.8
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 3.0e-49 199.5 264 47.7
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 6.7e-49 198.4 306 43.1
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 8.7e-49 198.0 304 43.8
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 1.1e-48 197.6 295 46.8
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 2.5e-48 196.4 308 42.9
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 5.6e-48 195.3 303 48.5
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 2.1e-47 193.4 246 47.6
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 1.4e-46 190.7 301 43.9
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 1.4e-46 190.7 296 43.9
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 3.1e-46 189.5 297 41.8
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 1.5e-45 187.2 263 45.2
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 2.0e-45 186.8 299 42.8
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 2.6e-45 186.4 307 42.0
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 1.3e-44 184.1 280 46.1
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 1.3e-44 184.1 265 46.4
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 3.8e-44 182.6 311 42.8
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 3.8e-44 182.6 265 46.0
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 4.9e-44 182.2 275 41.8
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 4.9e-44 182.2 286 43.0
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 4.9e-44 182.2 286 40.6
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 1.9e-43 180.3 285 41.8
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 2.5e-43 179.9 296 42.9
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 2.5e-43 179.9 294 42.5
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.6e-42 177.2 299 41.5
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 2.7e-42 176.4 296 41.6
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 2.7e-42 176.4 296 41.2
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 3.5e-42 176.0 285 38.6
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 1.3e-41 174.1 293 43.7
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 1.8e-41 173.7 275 38.5
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.3e-41 173.3 275 46.5
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 5.1e-41 172.2 305 39.0
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 6.7e-41 171.8 254 44.9
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 6.7e-41 171.8 305 40.0
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 4.3e-40 169.1 294 40.1
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 4.3e-40 169.1 296 43.2
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 5.7e-40 168.7 301 41.2
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 5.7e-40 168.7 295 41.4
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 7.4e-40 168.3 302 38.4
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 7.4e-40 168.3 299 39.8
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 3.7e-39 166.0 288 41.0
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 4.8e-39 165.6 296 40.2
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.4e-38 164.1 273 41.0
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 4.1e-38 162.5 277 39.0
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 4.1e-38 162.5 280 39.6
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 2.0e-37 160.2 297 41.4
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 4.5e-37 159.1 316 37.0
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 7.6e-37 158.3 264 43.9
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 2.9e-36 156.4 289 36.7
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.4e-35 154.1 270 45.6
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 2.5e-35 153.3 251 41.8
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 9.4e-35 151.4 283 37.5
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 2.1e-34 150.2 277 35.4
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 1.8e-33 147.1 301 36.2
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 2.3e-33 146.7 260 42.7
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 5.1e-33 145.6 259 40.5
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 6.7e-33 145.2 279 37.3
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 8.8e-33 144.8 283 37.8
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 1.1e-32 144.4 244 43.4
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 1.5e-32 144.1 279 38.0
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 4.3e-32 142.5 302 37.1
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 4.3e-32 142.5 319 38.2
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 9.7e-32 141.4 286 39.2
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 2.2e-31 140.2 270 36.7
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 2.2e-31 140.2 278 38.8
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 2.2e-31 140.2 297 37.0
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 2.2e-31 140.2 297 36.7
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 2.2e-31 140.2 294 39.1
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 6.3e-31 138.7 278 38.1
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 1.1e-30 137.9 278 38.1
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 1.1e-30 137.9 278 38.1
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 1.1e-30 137.9 278 38.1
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 1.8e-30 137.1 269 38.3
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 5.3e-30 135.6 283 38.5
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 6.9e-30 135.2 277 36.8
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.5e-29 134.0 286 39.9
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 2.0e-29 133.7 273 36.3
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 2.6e-29 133.3 278 37.4
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 3.4e-29 132.9 278 37.4
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 4.5e-29 132.5 297 36.4
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 5.9e-29 132.1 297 35.7
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 5.9e-29 132.1 213 41.3
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 7.7e-29 131.7 278 38.5
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 1.3e-28 131.0 276 36.2
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.3e-28 131.0 258 35.3
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 1.7e-28 130.6 282 37.9
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 1.7e-28 130.6 159 48.4
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 2.5e-27 126.7 278 36.0
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 4.2e-27 125.9 281 37.0
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 4.2e-27 125.9 274 35.4
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 7.2e-27 125.2 278 36.0
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 7.2e-27 125.2 288 38.9
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 7.2e-27 125.2 291 34.4
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 9.4e-27 124.8 250 38.0
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 9.4e-27 124.8 268 35.8
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 1.2e-26 124.4 234 37.6
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.2e-26 124.4 276 35.1
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 1.6e-26 124.0 277 36.5
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 2.7e-26 123.2 292 35.6
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 2.7e-26 123.2 284 34.5
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 4.7e-26 122.5 285 34.4
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 6.1e-26 122.1 267 34.5
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 7.9e-26 121.7 289 33.9
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 7.9e-26 121.7 282 35.1
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 1.0e-25 121.3 269 34.2
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.0e-25 121.3 258 36.8
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 1.4e-25 120.9 94 60.6
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 1.4e-25 120.9 294 35.4
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 2.3e-25 120.2 290 35.9
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 3.0e-25 119.8 268 35.4
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 3.9e-25 119.4 258 38.4
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 8.8e-25 118.2 257 36.2
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 2.0e-24 117.1 269 35.7
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 2.6e-24 116.7 266 35.7
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.6e-24 116.7 244 34.4
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 4.4e-24 115.9 270 34.8
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 7.4e-24 115.2 277 31.4
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 1.3e-23 114.4 257 37.7
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 4.8e-23 112.5 280 33.9
arahy.Tifrunner.gnm1.ann1.85Z4HY Arachis hypogaea HOM05D003715 ORTHO05D003958 6.3e-23 112.1 268 35.4
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 4.1e-22 109.4 261 33.3
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 5.3e-22 109.0 258 33.7
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.2e-21 107.8 259 32.0
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 2.0e-21 107.1 279 33.0
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 2.0e-21 107.1 234 39.3
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 3.4e-21 106.3 91 50.5
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 7.7e-21 105.1 259 32.4
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 1.3e-20 104.4 202 38.6
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 1.3e-20 104.4 178 38.2
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 1.7e-20 104.0 265 33.6
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 1.7e-20 104.0 265 33.6
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 1.7e-20 104.0 238 36.6
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 2.2e-20 103.6 264 31.1
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 6.5e-20 102.1 275 33.1
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 8.5e-20 101.7 221 34.8
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 8.5e-20 101.7 278 32.4
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 8.5e-20 101.7 75 66.7
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 1.4e-19 100.9 268 33.2
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 3.2e-19 99.8 241 38.6
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 1.8e-17 94.0 229 29.3
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 5.2e-17 92.4 227 33.5
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 5.7e-16 89.0 261 32.6
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 7.4e-16 88.6 271 31.0
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 1.7e-15 87.4 185 38.9
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 1.1e-14 84.7 93 44.1
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 1.8e-14 84.0 241 30.3
HPP92_014229 Vanilla planifolia HOM05D035551 ORTHO05D003958 4.1e-14 82.8 255 28.6
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.2e-13 81.3 251 32.7
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 5.0e-12 75.9 142 31.7
TAR633G2325 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.5e-11 74.3 152 35.5
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 3.2e-11 73.2 92 43.5
unitig_0.g211 Utricularia gibba HOM05D003715 ORTHO05D003958 7.2e-11 72.0 157 33.8
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 1.6e-10 70.9 132 31.8
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 1.7e-07 60.8 113 33.6
Zm00001eb160900 Zea mays HOM05D015210 ORTHO05D003958 2.4e-06 57.0 70 42.9
Zm00001eb160940 Zea mays HOM05D015210 ORTHO05D003958 5.3e-06 55.8 70 42.9


User provided reference genes

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