Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08272_v3 Cicer arietinum L. HOM05D004778 ORTHO05D005679 2.0e-20 101.7 60 100.0
Medtr7g085780 Medicago truncatula HOM05D004778 ORTHO05D005679 5.6e-18 93.6 60 90.0
TPR.G5922 Trifolium pratense HOM05D004778 ORTHO05D005679 1.2e-15 85.9 60 85.0
Lj1g0005970 Lotus japonicus HOM05D004778 ORTHO05D005679 2.2e-14 81.6 60 78.3
Lalb_Chr22g0359101 Lupinus albus HOM05D004778 ORTHO05D005679 2.9e-14 81.3 60 78.3
Glyma.16G040400 Glycine max HOM05D004778 ORTHO05D005679 6.0e-12 73.6 60 71.7
Phvul.004G080600 Phaseolus vulgaris HOM05D004778 ORTHO05D005679 3.0e-11 71.2 60 75.0
Glyma.02G072400 Glycine max HOM05D004778 ORTHO05D005679 5.1e-11 70.5 60 76.7
Glyma.16G153600 Glycine max HOM05D004778 ORTHO05D005679 6.6e-11 70.1 60 76.7
Medtr6g029260 Medicago truncatula HOM05D004778 ORTHO05D005679 6.6e-11 70.1 60 68.3
TPR.G27230 Trifolium pratense HOM05D004778 ORTHO05D005679 7.3e-10 66.6 60 63.3
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.6e-09 65.5 61 68.9
VMungo0464G1949 Vigna mungo HOM05D004778 ORTHO05D005679 2.1e-09 65.1 60 70.0
Phvul.001G111400 Phaseolus vulgaris HOM05D004778 ORTHO05D005679 4.7e-09 63.9 60 66.7
PGSC0003DMG400008381 Solanum tuberosum HOM05D004778 ORTHO05D005679 1.4e-08 62.4 62 66.1
TAR633G1575 Trochodendron aralioides HOM05D004778 ORTHO05D005679 1.4e-08 62.4 61 68.9
Hma1.2p1_0152F.1_g067660 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 5.2e-08 60.5 61 67.2
Hma1.2p1_0589F.1_g184910 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 5.2e-08 60.5 61 67.2
MD03G1004000 Malus domestica HOM05D004778 ORTHO05D005679 8.9e-08 59.7 62 64.5
Duzib106G0337 Durio zibethinus HOM05D004778 ORTHO05D005679 1.5e-07 58.9 61 63.9
Duzib128G0115 Durio zibethinus HOM05D004778 ORTHO05D005679 2.0e-07 58.5 61 63.9
Gohir.D11G246400 Gossypium hirsutum HOM05D004778 ORTHO05D005679 2.0e-07 58.5 61 62.3
Duzib106G1560 Durio zibethinus HOM05D004778 ORTHO05D005679 2.6e-07 58.2 61 63.9
Rhsim13G0232700 Rhododendron simsii HOM05D004778 ORTHO05D005679 2.6e-07 58.2 62 62.9
Sabra19G0043900 Salix brachista HOM05D004778 ORTHO05D005679 2.6e-07 58.2 61 62.3
Sabra19G0047200 Salix brachista HOM05D004778 ORTHO05D005679 2.6e-07 58.2 61 62.3
Aqoxy1G00473 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 3.4e-07 57.8 61 62.3
AL8G32300 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 4.4e-07 57.4 62 59.7
Lalb_Chr20g0116241 Lupinus albus HOM05D004778 ORTHO05D005679 4.4e-07 57.4 60 60.0
Thecc.05G250100 Theobroma cacao HOM05D004778 ORTHO05D005679 4.4e-07 57.4 61 63.9
Manes.09G140700 Manihot esculenta HOM05D004778 ORTHO05D005679 5.8e-07 57.0 61 63.9
Gohir.A13G099600 Gossypium hirsutum HOM05D004778 ORTHO05D005679 7.6e-07 56.6 61 62.3
Manes.08G144900 Manihot esculenta HOM05D004778 ORTHO05D005679 9.9e-07 56.2 59 62.7
Potri.013G057500 Populus trichocarpa HOM05D004778 ORTHO05D005679 9.9e-07 56.2 59 64.4
Nn2g15855 Nelumbo nucifera HOM05D004778 ORTHO05D005679 1.3e-06 55.8 61 62.3
TWI32G0653 Tripterygium wilfordii HOM05D004778 ORTHO05D005679 1.3e-06 55.8 61 62.3
Aa31LG3G12430 Aethionema arabicum HOM05D004778 ORTHO05D005679 1.7e-06 55.5 62 59.7
Cpa.g.sc119.43 Carica papaya HOM05D004778 ORTHO05D005679 1.7e-06 55.5 61 63.9
Prupe.6G003500 Prunus persica HOM05D004778 ORTHO05D005679 1.7e-06 55.5 62 59.7
TAR623G1546 Trochodendron aralioides HOM05D004778 ORTHO05D005679 1.7e-06 55.5 61 60.7
Lalb_Chr24g0403101 Lupinus albus HOM05D004778 ORTHO05D005679 2.2e-06 55.1 60 58.3
Solyc10g078580.1 Solanum lycopersicum HOM05D004778 ORTHO05D005679 2.2e-06 55.1 62 59.7
Carub.0008s1702 Capsella rubella HOM05D004778 ORTHO05D005679 2.9e-06 54.7 62 58.1
AT5G56540 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 3.7e-06 54.3 62 56.5
BcaC03g14215 Brassica carinata HOM05D004778 ORTHO05D005679 3.7e-06 54.3 62 54.8
C02p15150 Brassica napus HOM05D004778 ORTHO05D005679 3.7e-06 54.3 62 54.8
BolC2t07632H Brassica oleracea HOM05D004778 ORTHO05D005679 3.7e-06 54.3 62 54.8
PGR142G3834 Punica granatum HOM05D004778 ORTHO05D005679 4.9e-06 53.9 61 59.0
PGSC0003DMG400032211 Solanum tuberosum HOM05D004778 ORTHO05D005679 4.9e-06 53.9 63 55.6
TPR.G9135 Trifolium pratense HOM05D004778 ORTHO05D005679 4.9e-06 53.9 52 63.5
Sp6g18330 Schrenkiella parvula HOM05D004778 ORTHO05D005679 6.4e-06 53.5 62 56.5
BcaNung06233 Brassica carinata HOM05D004778 ORTHO05D005679 8.4e-06 53.1 63 57.1
BolC5t34103H Brassica oleracea HOM05D004778 ORTHO05D005679 8.4e-06 53.1 63 57.1


User provided reference genes

Program Settings