Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 2.1e-85 318.9 157 100.0
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 4.0e-76 288.1 148 94.6
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 4.5e-75 284.6 148 91.2
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 3.2e-73 278.5 148 90.5
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 3.0e-71 271.9 147 88.4
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 3.3e-70 268.5 147 87.1
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 8.2e-69 263.8 147 85.7
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 1.8e-68 262.7 147 85.7
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 1.2e-67 260.0 147 83.7
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 7.6e-67 257.3 147 84.4
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 1.3e-66 256.5 147 81.0
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 2.9e-66 255.4 147 83.0
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 8.4e-66 253.8 148 80.4
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 8.4e-66 253.8 148 80.4
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 1.4e-65 253.1 148 80.4
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 3.2e-65 251.9 148 80.4
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 4.2e-65 251.5 148 79.1
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.2e-65 251.5 148 79.1
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 5.5e-65 251.1 148 80.4
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 7.1e-65 250.8 148 79.1
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 9.3e-65 250.4 148 79.1
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 1.6e-64 249.6 148 79.7
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 2.1e-64 249.2 148 79.1
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 2.7e-64 248.8 148 78.4
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 3.5e-64 248.4 149 78.5
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 4.6e-64 248.1 149 77.2
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 4.6e-64 248.1 148 78.4
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 4.6e-64 248.1 148 78.4
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 7.9e-64 247.3 148 79.1
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.0e-63 246.9 148 77.7
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 1.0e-63 246.9 148 78.4
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 1.3e-63 246.5 148 78.4
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.8e-63 246.1 148 77.7
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 2.3e-63 245.7 148 79.7
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 3.0e-63 245.4 148 79.1
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 3.9e-63 245.0 148 78.4
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 5.1e-63 244.6 148 78.4
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 5.1e-63 244.6 148 79.1
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 5.1e-63 244.6 148 78.4
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 5.1e-63 244.6 148 78.4
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 8.7e-63 243.8 148 79.1
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 8.7e-63 243.8 148 77.7
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 1.9e-62 242.7 148 77.0
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 2.5e-62 242.3 148 77.0
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 3.3e-62 241.9 148 76.4
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 3.3e-62 241.9 148 77.0
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 4.3e-62 241.5 148 76.4
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 4.3e-62 241.5 148 77.0
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 5.7e-62 241.1 148 77.0
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 5.7e-62 241.1 148 77.0
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 5.7e-62 241.1 148 77.0
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 5.7e-62 241.1 148 77.0
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 5.7e-62 241.1 166 72.9
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 5.7e-62 241.1 147 76.2
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 5.7e-62 241.1 148 77.7
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 9.7e-62 240.4 151 75.5
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 9.7e-62 240.4 148 76.4
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 2.1e-61 239.2 148 77.0
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 2.8e-61 238.8 148 77.0
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 3.7e-61 238.4 148 75.7
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 3.7e-61 238.4 148 76.4
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 4.8e-61 238.0 149 75.2
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 4.8e-61 238.0 148 75.0
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 6.3e-61 237.7 148 75.7
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 8.2e-61 237.3 148 76.4
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 8.2e-61 237.3 148 77.0
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 1.8e-60 236.1 149 73.8
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 1.8e-60 236.1 147 76.2
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 1.8e-60 236.1 148 75.0
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 2.4e-60 235.7 148 74.3
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 6.9e-60 234.2 147 76.9
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 6.9e-60 234.2 147 75.5
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 9.0e-60 233.8 147 76.2
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 1.2e-59 233.4 147 76.2
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 2.6e-59 232.3 165 68.5
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 1.3e-58 229.9 148 75.0
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 6.5e-58 227.6 147 71.4
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 6.5e-58 227.6 147 72.8
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 1.4e-57 226.5 187 63.1
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 2.5e-57 225.7 143 74.8
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 2.5e-57 225.7 148 71.6
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 5.5e-57 224.6 147 70.1
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.6e-56 223.0 148 70.9
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 3.3e-54 215.3 147 68.7
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 5.7e-54 214.5 147 68.7
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.6e-53 213.0 176 61.4
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 1.4e-49 199.9 153 66.7
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.7e-48 195.7 123 74.8
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 1.0e-47 193.7 148 65.5
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.3e-42 176.8 113 73.5
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 3.8e-42 175.3 147 59.9
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 6.5e-42 174.5 147 59.9
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 8.8e-39 164.1 150 53.3
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 3.7e-37 158.7 151 55.0
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 1.8e-36 156.4 151 53.0
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 2.4e-36 156.0 91 75.8
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 1.2e-35 153.7 147 56.5
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 3.5e-35 152.1 87 81.6
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 1.0e-34 150.6 150 50.0
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 2.9e-34 149.1 147 51.7
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 3.8e-34 148.7 105 66.7
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.1e-33 147.1 91 72.5
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 6.7e-31 137.9 91 68.1
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 9.7e-30 134.0 88 70.5
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 1.3e-29 133.7 150 44.0
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 2.2e-29 132.9 148 51.4
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 2.2e-29 132.9 88 68.2
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 1.8e-28 129.8 85 72.9
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 3.1e-28 129.0 147 50.3
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 4.7e-24 115.2 126 48.4
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 8.0e-24 114.4 99 59.6
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 8.8e-23 110.9 152 42.1
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 6.8e-07 58.2 59 44.1


User provided reference genes

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