Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 4.4e-101 371.3 190 100.0
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 1.3e-100 369.8 190 99.5
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 2.8e-100 368.6 190 98.9
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 6.3e-100 367.5 190 98.9
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 8.3e-100 367.1 190 98.4
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 1.1e-99 366.7 190 97.9
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 2.4e-99 365.5 190 97.9
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 3.1e-99 365.2 190 97.9
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 5.4e-99 364.4 192 97.9
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 1.6e-98 362.8 190 97.9
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 1.0e-97 360.1 190 96.8
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 2.7e-90 335.5 186 90.9
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 1.0e-89 333.6 186 89.8
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 1.1e-88 330.1 193 89.6
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 3.6e-87 325.1 193 88.1
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 5.2e-86 321.2 185 90.3
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 8.9e-86 320.5 193 87.0
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 8.9e-86 320.5 193 87.0
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 8.9e-86 320.5 192 87.0
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 1.5e-85 319.7 193 86.0
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 2.0e-85 319.3 193 86.5
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 5.8e-85 317.8 192 85.9
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 1.3e-84 316.6 187 88.2
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 1.7e-84 316.2 189 86.8
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 2.9e-84 315.5 185 88.1
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 2.9e-84 315.5 197 83.2
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 4.9e-84 314.7 192 85.4
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 6.4e-84 314.3 193 85.0
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 2.4e-83 312.4 194 87.1
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 5.4e-83 311.2 195 84.6
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 7.0e-83 310.8 189 86.8
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 1.2e-82 310.1 195 84.1
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 1.2e-82 310.1 174 89.7
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.6e-82 309.7 195 84.1
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 1.6e-82 309.7 195 84.1
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 2.0e-82 309.3 188 86.2
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 2.0e-82 309.3 189 84.7
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 2.0e-82 309.3 189 85.2
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 2.0e-82 309.3 195 85.1
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 3.5e-82 308.5 188 86.2
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 3.5e-82 308.5 189 84.7
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 6.0e-82 307.8 187 86.1
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 6.0e-82 307.8 195 83.6
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 7.8e-82 307.4 189 83.6
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 1.0e-81 307.0 191 83.2
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 1.3e-81 306.6 190 84.2
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.3e-81 306.6 190 84.2
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 3.0e-81 305.4 190 83.7
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 3.0e-81 305.4 189 84.1
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 5.0e-81 304.7 190 83.2
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 6.6e-81 304.3 189 83.1
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 8.6e-81 303.9 190 83.7
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 8.6e-81 303.9 188 85.6
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 1.1e-80 303.5 190 83.2
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 1.1e-80 303.5 189 85.2
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 1.9e-80 302.8 190 83.2
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 2.5e-80 302.4 187 85.0
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 2.5e-80 302.4 190 82.6
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 2.5e-80 302.4 190 82.1
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 3.3e-80 302.0 190 83.2
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 4.3e-80 301.6 190 82.6
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 4.3e-80 301.6 190 82.6
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 1.6e-79 299.7 193 82.4
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 1.6e-79 299.7 193 82.4
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 3.6e-79 298.5 193 81.9
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 1.1e-78 297.0 187 84.0
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 4.0e-78 295.0 186 80.6
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 5.2e-78 294.7 189 83.1
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 5.2e-78 294.7 192 79.7
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 1.7e-76 289.7 189 82.0
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 1.7e-76 289.7 192 81.8
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 1.7e-76 289.7 192 81.8
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 2.2e-76 289.3 189 82.0
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 2.2e-76 289.3 189 82.0
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 2.2e-76 289.3 189 82.0
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 3.7e-76 288.5 193 79.8
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 6.4e-76 287.7 188 81.4
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 2.4e-75 285.8 190 80.5
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 2.4e-75 285.8 191 79.6
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 2.4e-75 285.8 191 81.2
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 3.2e-75 285.4 191 81.2
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 4.1e-75 285.0 191 79.6
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 5.4e-75 284.6 187 78.6
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 7.1e-75 284.3 186 80.1
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 2.1e-74 282.7 187 78.6
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 3.0e-73 278.9 189 78.8
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 3.9e-73 278.5 187 78.6
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 8.6e-73 277.3 179 78.2
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 1.5e-72 276.6 186 79.0
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 2.5e-72 275.8 186 78.0
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 9.5e-72 273.9 195 77.9
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 2.1e-71 272.7 186 76.3
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 1.4e-70 270.0 192 75.0
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 4.0e-70 268.5 202 69.8
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 5.2e-70 268.1 189 76.2
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 7.6e-69 264.2 183 76.0
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 3.7e-68 261.9 183 74.3
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 1.6e-66 256.5 179 75.4
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 1.3e-65 253.4 174 78.7
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 3.3e-64 248.8 187 71.7
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 1.2e-63 246.9 190 68.9
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 1.2e-63 246.9 200 65.5
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 1.6e-63 246.5 184 70.1
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 3.6e-63 245.4 183 70.5
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 1.4e-62 243.4 202 63.4
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 1.7e-60 236.5 210 60.5
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 1.9e-59 233.0 181 66.9
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 9.3e-59 230.7 183 61.7
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 1.0e-57 227.3 129 90.7
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 3.6e-55 218.8 189 67.7
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 6.2e-55 218.0 135 84.4
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 8.1e-55 217.6 136 86.0
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 3.1e-54 215.7 188 64.9
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 4.3e-48 195.3 167 65.9
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 2.1e-47 193.0 189 61.4
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 8.4e-44 181.0 120 83.3
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 5.1e-41 171.8 116 80.2
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.9e-40 169.9 191 55.0
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 2.5e-40 169.5 132 71.2
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 2.2e-36 156.4 101 77.2
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 2.7e-34 149.4 164 43.9
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 8.7e-33 144.4 136 64.7
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 1.6e-31 140.2 97 75.3
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 3.1e-30 136.0 90 77.8
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 1.7e-28 130.2 106 67.0
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 3.5e-26 122.5 71 93.0
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 8.2e-23 111.3 82 74.4
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 3.0e-17 92.8 170 31.2
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 7.4e-16 88.2 45 86.7
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.3e-15 87.4 77 67.5
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 3.4e-13 79.3 160 31.9
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 7.9e-10 68.2 43 74.4
SGA_v2.0_scaffold105G30513 Striga asiatica HOM05D000825 ORTHO05D002486 1.8e-06 57.0 78 57.7
SGA_v2.0_scaffold131G34402 Striga asiatica HOM05D005910 ORTHO05D007088 4.1e-06 55.8 52 69.2


User provided reference genes

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