Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08233_v3 Cicer arietinum L. HOM05D001131 ORTHO05D000972 1.8e-84 315.8 159 100.0
Medtr7g084690 Medicago truncatula HOM05D001131 ORTHO05D000972 4.9e-53 211.5 147 72.8
Psat3g092840 Pisum sativum HOM05D001131 ORTHO05D000972 7.8e-51 204.1 162 68.5
TPR.G31655 Trifolium pratense HOM05D001131 ORTHO05D000972 1.1e-49 200.3 158 66.5
TPR.G31661 Trifolium pratense HOM05D001131 ORTHO05D000972 2.5e-49 199.1 158 67.1
TPR.G31665 Trifolium pratense HOM05D001131 ORTHO05D000972 8.9e-47 190.7 153 66.0
TPR.G31652 Trifolium pratense HOM05D001131 ORTHO05D000972 2.2e-45 186.0 153 64.7
Lj1g0026347 Lotus japonicus HOM05D001131 ORTHO05D000972 3.0e-42 175.6 143 65.0
VMungo0464G2064 Vigna mungo HOM05D001131 ORTHO05D000972 3.4e-38 162.2 144 58.3
Lalb_Chr24g0402971 Lupinus albus HOM05D001131 ORTHO05D000972 4.4e-38 161.8 151 55.6
Potri.014G139900 Populus trichocarpa HOM05D001131 ORTHO05D000972 1.1e-36 157.1 146 59.6
VMungo1383G1930 Vigna mungo HOM05D001131 ORTHO05D000972 2.4e-36 156.0 156 57.1
Thecc.04G051500 Theobroma cacao HOM05D001131 ORTHO05D000972 5.4e-36 154.8 153 56.2
Glyma.16G045300 Glycine max HOM05D001131 ORTHO05D000972 2.1e-35 152.9 151 58.3
Phvul.004G067900 Phaseolus vulgaris HOM05D001131 ORTHO05D000972 4.6e-35 151.8 145 56.6
Ciclev10016745m.g Citrus clementina HOM05D001131 ORTHO05D000972 6.0e-35 151.4 154 54.5
Phvul.001G098600 Phaseolus vulgaris HOM05D001131 ORTHO05D000972 1.3e-34 150.2 151 57.6
Glyma.19G106400 Glycine max HOM05D001131 ORTHO05D000972 1.7e-34 149.8 151 56.3
QL02p068251 Quercus lobata HOM05D001131 ORTHO05D000972 6.6e-34 147.9 157 56.7
GSVIVG01032948001 Vitis vinifera HOM05D001131 ORTHO05D000972 2.1e-32 142.9 145 53.1
Glyma.02G068100 Glycine max HOM05D001131 ORTHO05D000972 3.1e-31 139.0 155 51.0
Manes.11G073300 Manihot esculenta HOM05D001131 ORTHO05D000972 2.6e-30 136.0 148 52.0
Glyma.16G149600 Glycine max HOM05D001131 ORTHO05D000972 7.1e-28 127.9 149 48.3
arahy.Tifrunner.gnm1.ann1.I6Q85W Arachis hypogaea HOM05D001131 ORTHO05D000972 9.2e-28 127.5 156 51.3
COL.COLO4_13403 Corchorus olitorius HOM05D001131 ORTHO05D000972 2.7e-27 125.9 161 47.2
TAR371G0961 Trochodendron aralioides HOM05D001131 ORTHO05D000972 4.6e-27 125.2 146 48.6
Aqoxy3G01772 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 6.0e-27 124.8 158 46.2
Cfa007137 Carpinus fangiana HOM05D001131 ORTHO05D000972 1.7e-26 123.2 161 47.8
Manes.04G096900 Manihot esculenta HOM05D001131 ORTHO05D000972 2.3e-26 122.9 144 50.7
TWI81G1099 Tripterygium wilfordii HOM05D001131 ORTHO05D000972 1.1e-25 120.6 148 47.3
Atru.chr6.2730 Acer truncatum HOM05D001131 ORTHO05D000972 1.9e-25 119.8 157 49.0
MBI11_g23198_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 9.6e-25 117.5 148 47.3
PGR142G2262 Punica granatum HOM05D001131 ORTHO05D000972 3.1e-23 112.5 161 49.7
Eucgr.I01569 Eucalyptus grandis HOM05D001131 ORTHO05D000972 6.8e-23 111.3 154 48.7
EL10Ac6g13907 Beta vulgaris HOM05D001131 ORTHO05D000972 1.7e-21 106.7 146 47.3
MBI07_g42010_MAGBIO Magnolia biondii HOM05D001131 ORTHO05D000972 4.9e-21 105.1 142 43.7
Aqoxy5G02997 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 6.4e-21 104.8 153 42.5
Ah.02g128740 Amaranthus hybridus HOM05D001131 ORTHO05D000972 7.1e-20 101.3 143 42.0
PSO017G4821 Papaver somniferum HOM05D001131 ORTHO05D000972 1.6e-19 100.1 151 43.0
ClCG05G012470 Citrullus lanatus HOM05D001131 ORTHO05D000972 2.1e-19 99.8 161 42.9
PSO478G1201 Papaver somniferum HOM05D001131 ORTHO05D000972 2.1e-19 99.8 148 41.2
Lalb_Chr21g0316991 Lupinus albus HOM05D001131 ORTHO05D000972 1.0e-18 97.4 118 45.8
TAR629G3365 Trochodendron aralioides HOM05D001131 ORTHO05D000972 6.6e-18 94.7 156 40.4
SEGI_15713 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 1.8e-15 86.7 145 41.4
AUR62032534 Chenopodium quinoa HOM05D001131 ORTHO05D000972 5.3e-15 85.1 89 47.2
MELO3C014759.2 Cucumis melo HOM05D001131 ORTHO05D000972 2.6e-14 82.8 152 38.8
Nn4g22074 Nelumbo nucifera HOM05D001131 ORTHO05D000972 2.6e-14 82.8 77 57.1
Haze_14986 Corylus avellana HOM05D001131 ORTHO05D000972 7.6e-14 81.3 151 40.4
Eucgr.G01914 Eucalyptus grandis HOM05D001131 ORTHO05D000972 9.9e-14 80.9 145 39.3
Eucgr.L01395 Eucalyptus grandis HOM05D001131 ORTHO05D000972 1.3e-13 80.5 144 38.2
Sed0010143 Sechium edule HOM05D001131 ORTHO05D000972 1.7e-13 80.1 149 39.6
Sed0004223 Sechium edule HOM05D001131 ORTHO05D000972 2.2e-13 79.7 147 40.8
Eucgr.L01394 Eucalyptus grandis HOM05D001131 ORTHO05D000972 1.1e-12 77.4 144 37.5
Eucgr.G01913 Eucalyptus grandis HOM05D001131 ORTHO05D000972 1.9e-12 76.6 141 39.7
CDE05G1753 Ceratophyllum demersum HOM05D001131 ORTHO05D000972 3.2e-12 75.9 153 34.0
Eucgr.G01915 Eucalyptus grandis HOM05D001131 ORTHO05D000972 4.6e-11 72.0 146 37.7
Lj2g0003081 Lotus japonicus HOM05D001131 ORTHO05D000972 3.3e-09 65.9 103 43.7
HPP92_013554 Vanilla planifolia HOM05D001131 ORTHO05D000972 3.3e-09 65.9 150 33.3
CDE05G0443 Ceratophyllum demersum HOM05D001131 ORTHO05D000972 1.3e-08 63.9 83 44.6
CsaV3_3G020060 Cucumis sativus L. HOM05D001131 ORTHO05D000972 3.6e-08 62.4 140 34.3
TWI12G1427 Tripterygium wilfordii HOM05D001131 ORTHO05D000972 6.2e-08 61.6 134 32.8
FAN23G1180 Fragaria x ananassa HOM05D001131 ORTHO05D000972 5.3e-07 58.5 141 31.9
ATR0705G095 Amborella trichopoda HOM05D001131 ORTHO05D000972 9.0e-07 57.8 141 33.3
Carub.0001s4108 Capsella rubella HOM05D001131 ORTHO05D000972 9.0e-07 57.8 145 29.0
FAN26G3052 Fragaria x ananassa HOM05D001131 ORTHO05D000972 9.0e-07 57.8 141 31.9
Haze_15838 Corylus avellana HOM05D001131 ORTHO05D000972 1.5e-06 57.0 138 29.0
Os01g0930500 Oryza sativa ssp. japonica HOM05D001131 ORTHO05D000972 1.5e-06 57.0 156 37.8
BcaC08g43969 Brassica carinata HOM05D001131 ORTHO05D000972 2.0e-06 56.6 142 28.9
C06p13680 Brassica napus HOM05D001131 ORTHO05D000972 2.0e-06 56.6 142 28.9
BolC6t36540H Brassica oleracea HOM05D001131 ORTHO05D000972 2.0e-06 56.6 142 28.9
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 2.0e-06 56.6 144 32.6
Cfa003656 Carpinus fangiana HOM05D001131 ORTHO05D000972 2.6e-06 56.2 134 28.4
BcaC01g01307 Brassica carinata HOM05D001131 ORTHO05D000972 4.5e-06 55.5 142 30.3
C03p90440 Brassica napus HOM05D001131 ORTHO05D000972 4.5e-06 55.5 142 30.3
BolC3t21365H Brassica oleracea HOM05D001131 ORTHO05D000972 4.5e-06 55.5 142 31.0
THA.LOC104810538 Tarenaya hassleriana HOM05D001131 ORTHO05D000972 4.5e-06 55.5 141 29.1
A05p19120 Brassica napus HOM05D001131 ORTHO05D000972 7.6e-06 54.7 142 28.2
BraA05t20815Z Brassica rapa HOM05D001131 ORTHO05D000972 7.6e-06 54.7 142 28.2
FAN28G1130 Fragaria x ananassa HOM05D001131 ORTHO05D000972 7.6e-06 54.7 148 31.1
Lalb_Chr05g0223161 Lupinus albus HOM05D001131 ORTHO05D000972 9.9e-06 54.3 139 28.8


User provided reference genes

Program Settings