Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 4.2e-36 154.1 73 100.0
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 9.7e-33 142.9 72 91.7
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 9.7e-33 142.9 72 91.7
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 2.2e-32 141.7 72 90.3
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 3.7e-32 141.0 72 90.3
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 3.7e-32 141.0 72 90.3
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.7e-32 141.0 72 88.9
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 4.8e-32 140.6 72 86.1
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 6.3e-32 140.2 72 88.9
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 8.3e-32 139.8 72 88.9
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 8.3e-32 139.8 72 88.9
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.1e-31 139.4 72 90.3
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.4e-31 139.0 72 88.9
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 1.8e-31 138.7 72 90.3
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.4e-31 138.3 72 86.1
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 3.1e-31 137.9 72 84.7
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 4.1e-31 137.5 72 86.1
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 5.3e-31 137.1 72 84.7
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.3e-31 137.1 72 83.3
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.3e-31 137.1 72 83.3
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 5.3e-31 137.1 72 84.7
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 9.1e-31 136.3 69 89.9
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 9.1e-31 136.3 72 86.1
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 9.1e-31 136.3 72 87.5
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 2.7e-30 134.8 72 83.3
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 2.7e-30 134.8 71 85.9
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 3.5e-30 134.4 72 84.7
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 3.5e-30 134.4 72 84.7
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 3.5e-30 134.4 72 84.7
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 4.5e-30 134.0 71 85.9
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 5.9e-30 133.7 72 83.3
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 5.9e-30 133.7 71 80.3
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 5.9e-30 133.7 72 81.9
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 5.9e-30 133.7 72 83.3
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 5.9e-30 133.7 72 86.1
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 1.0e-29 132.9 72 86.1
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.3e-29 132.5 72 83.3
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 1.3e-29 132.5 71 84.5
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 2.2e-29 131.7 72 84.7
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 2.2e-29 131.7 72 80.6
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 2.2e-29 131.7 72 80.6
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 2.9e-29 131.3 73 78.1
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 2.9e-29 131.3 72 81.9
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 6.5e-29 130.2 72 81.9
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 6.5e-29 130.2 69 88.4
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 8.5e-29 129.8 71 83.1
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 8.5e-29 129.8 72 80.6
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 1.1e-28 129.4 72 77.8
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 1.5e-28 129.0 71 80.3
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 1.5e-28 129.0 72 80.6
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 1.9e-28 128.6 73 80.8
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.5e-28 128.3 72 80.6
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.5e-28 128.3 69 87.0
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 2.5e-28 128.3 73 82.2
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 3.2e-28 127.9 64 85.9
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 5.5e-28 127.1 71 80.3
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 7.2e-28 126.7 66 89.4
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 7.2e-28 126.7 69 84.1
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 9.4e-28 126.3 72 79.2
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 2.1e-27 125.2 73 76.7
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 2.1e-27 125.2 73 74.0
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 2.7e-27 124.8 72 76.4
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 4.7e-27 124.0 71 77.5
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 75.3
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 75.3
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 76.7
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 76.7
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 76.7
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 76.7
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 76.7
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 75.3
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 6.1e-27 123.6 73 75.3
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 8.0e-27 123.2 71 74.6
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 8.0e-27 123.2 73 75.3
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.8e-26 122.1 71 73.2
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 3.0e-26 121.3 71 76.1
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 3.0e-26 121.3 70 78.6
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 4.0e-26 120.9 73 75.3
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.2e-26 120.6 72 70.8
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 6.8e-26 120.2 62 87.1
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 8.8e-26 119.8 73 75.3
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 3.4e-25 117.9 71 73.2
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 5.7e-25 117.1 72 65.3
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 7.5e-25 116.7 71 71.8
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 9.8e-25 116.3 72 68.1
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 9.8e-25 116.3 72 68.1
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 1.3e-24 115.9 71 71.8
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.3e-24 115.9 72 72.2
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.7e-24 115.5 71 70.4
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 2.2e-24 115.2 72 69.4
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.8e-24 114.8 73 72.6
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 2.8e-24 114.8 69 72.5
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 2.8e-24 114.8 69 72.5
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 3.7e-24 114.4 59 86.4
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 6.3e-24 113.6 67 74.6
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 1.1e-23 112.8 66 75.8
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 1.1e-23 112.8 66 75.8
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 1.1e-23 112.8 66 75.8
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 2.4e-23 111.7 61 78.7
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.1e-23 110.9 72 59.7
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 9.1e-23 109.8 72 63.9
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.6e-22 109.0 65 72.3
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 1.6e-22 109.0 65 72.3
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.6e-22 109.0 72 63.9
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.6e-22 109.0 72 63.9
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.7e-22 108.2 72 65.3
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.7e-22 108.2 72 65.3
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.7e-22 108.2 72 65.3
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.5e-22 107.8 72 62.5
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.5e-22 107.8 72 62.5
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 7.7e-22 106.7 72 69.4
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 2.3e-21 105.1 72 62.5
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 5.0e-21 104.0 65 69.2
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 5.0e-21 104.0 69 65.2
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.9e-20 102.1 69 63.8
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 4.2e-20 100.9 62 71.0
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.2e-19 99.4 70 55.7
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.4e-18 95.9 49 83.7
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.8e-18 95.5 63 69.8
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.5e-17 92.4 58 72.4
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.7e-17 90.5 48 81.2
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 2.0e-09 65.5 70 45.7
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.4e-07 59.3 70 41.4
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 1.9e-07 58.9 72 40.3
TAR371G0913 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.0e-06 55.5 25 88.0


User provided reference genes

Program Settings