Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08098_v3 Cicer arietinum L. HOM05D007158 ORTHO05D007424 1.4e-85 320.1 232 100.0
TPR.G28397 Trifolium pratense HOM05D007158 ORTHO05D007424 4.0e-56 222.2 187 72.7
Psat3g097040 Pisum sativum HOM05D007158 ORTHO05D007424 2.0e-55 219.9 183 68.3
Medtr7g082850 Medicago truncatula HOM05D007158 ORTHO05D007424 2.4e-53 213.0 186 65.1
Glyma.02G090200 Glycine max HOM05D007158 ORTHO05D007424 8.7e-51 204.5 192 63.0
Lalb_Chr10g0091481 Lupinus albus HOM05D007158 ORTHO05D007424 1.2e-47 194.1 194 58.8
Glyma.18G293000 Glycine max HOM05D007158 ORTHO05D007424 2.2e-46 189.9 247 54.7
Phvul.008G009100 Phaseolus vulgaris HOM05D007158 ORTHO05D007424 5.1e-43 178.7 238 47.5
VMungo1383G1080 Vigna mungo HOM05D007158 ORTHO05D007424 6.9e-40 168.3 191 55.0
Lj1g0013464 Lotus japonicus HOM05D007158 ORTHO05D007424 4.5e-39 165.6 189 55.0
Cfa007880 Carpinus fangiana HOM05D007158 ORTHO05D007424 6.7e-35 151.8 186 50.0
CiPaw.04G044500 Carya illinoinensis HOM05D007158 ORTHO05D007424 1.8e-32 143.7 191 49.2
arahy.Tifrunner.gnm1.ann1.5M3IQK Arachis hypogaea HOM05D007158 ORTHO05D007424 2.0e-31 140.2 200 47.0
arahy.Tifrunner.gnm1.ann1.896A9W Arachis hypogaea HOM05D007158 ORTHO05D007424 5.8e-31 138.7 200 46.0
QL02p049322 Quercus lobata HOM05D007158 ORTHO05D007424 6.5e-30 135.2 186 45.2
ClCG07G016450 Citrullus lanatus HOM05D007158 ORTHO05D007424 3.2e-29 132.9 194 42.8
Ciclev10012598m.g Citrus clementina HOM05D007158 ORTHO05D007424 5.5e-29 132.1 185 43.2
Haze_14197 Corylus avellana HOM05D007158 ORTHO05D007424 2.1e-28 130.2 110 63.6
Prupe.3G150100 Prunus persica HOM05D007158 ORTHO05D007424 4.6e-28 129.0 191 44.5
MELO3C010379.2 Cucumis melo HOM05D007158 ORTHO05D007424 1.8e-27 127.1 194 39.7
CsaV3_4G010370 Cucumis sativus L. HOM05D007158 ORTHO05D007424 2.3e-27 126.7 193 45.6
GSVIVG01030945001 Vitis vinifera HOM05D007158 ORTHO05D007424 6.7e-27 125.2 187 44.9
Rhsim08G0084200 Rhododendron simsii HOM05D007158 ORTHO05D007424 1.9e-26 123.6 186 45.2
COL.COLO4_03615 Corchorus olitorius HOM05D007158 ORTHO05D007424 2.5e-26 123.2 192 42.2
PGR004G0702 Punica granatum HOM05D007158 ORTHO05D007424 3.3e-26 122.9 189 43.4
Manes.01G113800 Manihot esculenta HOM05D007158 ORTHO05D007424 4.3e-26 122.5 188 43.1
Migut.H00250 Erythranthe guttata HOM05D007158 ORTHO05D007424 7.4e-26 121.7 190 43.7
Thecc.04G126100 Theobroma cacao HOM05D007158 ORTHO05D007424 1.6e-25 120.6 208 40.4
CDE04G0479 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 6.3e-25 118.6 188 44.1
Eucgr.F02798 Eucalyptus grandis HOM05D007158 ORTHO05D007424 6.3e-25 118.6 195 40.0
Duzib138G0519 Durio zibethinus HOM05D007158 ORTHO05D007424 1.1e-24 117.9 207 38.6
MD09G1258200 Malus domestica HOM05D007158 ORTHO05D007424 3.1e-24 116.3 192 41.7
Potri.004G094500 Populus trichocarpa HOM05D007158 ORTHO05D007424 6.9e-24 115.2 197 45.2
RcHm_v2.0_Chr1g0332591 Rosa chinensis HOM05D007158 ORTHO05D007424 6.9e-24 115.2 188 40.4
TAR629G2388 Trochodendron aralioides HOM05D007158 ORTHO05D007424 1.5e-23 114.0 197 40.6
DCAR_025891 Daucus carota HOM05D007158 ORTHO05D007424 2.6e-23 113.2 200 41.5
Gohir.A11G161300 Gossypium hirsutum HOM05D007158 ORTHO05D007424 5.9e-23 112.1 190 39.5
FvH4_7g05720 Fragaria vesca HOM05D007158 ORTHO05D007424 7.6e-23 111.7 180 39.4
FAN01G1160 Fragaria x ananassa HOM05D007158 ORTHO05D007424 7.6e-23 111.7 180 39.4
Duzib133G0688 Durio zibethinus HOM05D007158 ORTHO05D007424 1.0e-22 111.3 189 40.7
Dinv14854 Davidia involucrata HOM05D007158 ORTHO05D007424 2.2e-22 110.2 184 40.8
Gohir.D11G167600 Gossypium hirsutum HOM05D007158 ORTHO05D007424 2.2e-22 110.2 190 38.9
Gorai.007G178700 Gossypium raimondii HOM05D007158 ORTHO05D007424 2.2e-22 110.2 190 38.9
CAN.G225.14 Capsicum annuum HOM05D007158 ORTHO05D007424 6.5e-22 108.6 192 39.1
vmacro18064 Vaccinium macrocarpon HOM05D007158 ORTHO05D007424 6.5e-22 108.6 196 41.3
Cc07_g08430 Coffea canephora HOM05D007158 ORTHO05D007424 8.5e-22 108.2 197 37.6
Potri.017G121000 Populus trichocarpa HOM05D007158 ORTHO05D007424 8.5e-22 108.2 196 41.8
TWI74G0884 Tripterygium wilfordii HOM05D007158 ORTHO05D007424 8.5e-22 108.2 183 41.5
Actinidia17647 Actinidia chinensis HOM05D007158 ORTHO05D007424 1.1e-21 107.8 133 45.1
Cpa.g.sc170.15 Carica papaya HOM05D007158 ORTHO05D007424 2.5e-21 106.7 210 37.1
Hma1.2p1_0500F.1_g167110 Hydrangea macrophylla HOM05D007158 ORTHO05D007424 3.2e-21 106.3 186 41.9
FAN10G2330 Fragaria x ananassa HOM05D007158 ORTHO05D007424 4.2e-21 105.9 180 38.3
Solyc02g063280.4 Solanum lycopersicum HOM05D007158 ORTHO05D007424 4.2e-21 105.9 204 36.3
CANSAT78G1746 Cannabis sativa HOM05D007158 ORTHO05D007424 5.5e-21 105.5 192 39.1
Lj4A182G65 Lonicera japonica HOM05D007158 ORTHO05D007424 5.5e-21 105.5 147 45.6
Atru.chr1.1578 Acer truncatum HOM05D007158 ORTHO05D007424 1.6e-20 104.0 183 38.8
Sabra17G0103400 Salix brachista HOM05D007158 ORTHO05D007424 2.7e-20 103.2 196 40.3
PGSC0003DMG400010413 Solanum tuberosum HOM05D007158 ORTHO05D007424 4.6e-20 102.4 199 37.7
CDE06G2846 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 6.1e-20 102.1 186 44.1
Sopen02g014350 Solanum pennellii HOM05D007158 ORTHO05D007424 6.1e-20 102.1 202 36.1
HanXRQChr09g0262471 Helianthus annuus HOM05D007158 ORTHO05D007424 1.4e-19 100.9 151 43.0
Nitab4.5_0002644g0050 Nicotiana tabacum HOM05D007158 ORTHO05D007424 2.3e-19 100.1 196 36.7
Nitab4.5_0000036g0590 Nicotiana tabacum HOM05D007158 ORTHO05D007424 3.0e-19 99.8 193 37.8
Aqoxy3G00164 Aquilegia oxysepala HOM05D007158 ORTHO05D007424 3.9e-19 99.4 101 51.5
FAN23G0239 Fragaria x ananassa HOM05D007158 ORTHO05D007424 3.9e-19 99.4 179 38.0
MSTRG.2781 Avicennia marina HOM05D007158 ORTHO05D007424 5.1e-19 99.0 203 34.5
Sc10g0001000 Simmondsia chinensis HOM05D007158 ORTHO05D007424 6.7e-19 98.6 196 36.2
Oeu047435.1 Olea europaea HOM05D007158 ORTHO05D007424 1.9e-18 97.1 211 36.0
FAN03G1259 Fragaria x ananassa HOM05D007158 ORTHO05D007424 4.3e-18 95.9 178 38.2
Lsat_1_v5_gn_4_156301 Lactuca sativa HOM05D007158 ORTHO05D007424 4.3e-18 95.9 199 40.2
Hund13698 Selenicereus undatus HOM05D007158 ORTHO05D007424 5.7e-18 95.5 198 36.4
Rhsim10G0076900 Rhododendron simsii HOM05D007158 ORTHO05D007424 7.4e-18 95.1 168 39.3
Ah.10g037870 Amaranthus hybridus HOM05D007158 ORTHO05D007424 1.7e-17 94.0 113 46.9
HPP92_023114 Vanilla planifolia HOM05D007158 ORTHO05D007424 2.2e-17 93.6 188 39.9
AUR62023262 Chenopodium quinoa HOM05D007158 ORTHO05D007424 2.8e-17 93.2 146 39.0
TAR374G0148 Trochodendron aralioides HOM05D007158 ORTHO05D007424 6.3e-17 92.0 191 38.7
ECA232G0903 Erigeron canadensis HOM05D007158 ORTHO05D007424 8.2e-17 91.7 204 35.3
Peaxi162Scf00343g00058 Petunia axillaris HOM05D007158 ORTHO05D007424 8.2e-17 91.7 199 37.2
FAN04G1654 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.1e-16 91.3 178 37.1
THA.LOC104809979 Tarenaya hassleriana HOM05D007158 ORTHO05D007424 1.1e-16 91.3 198 40.9
Nn4g24036 Nelumbo nucifera HOM05D007158 ORTHO05D007424 3.1e-16 89.7 187 38.0
Os01g0505700 Oryza sativa ssp. japonica HOM05D007158 ORTHO05D007424 5.3e-16 89.0 62 66.1
Sabra04G0063800 Salix brachista HOM05D007158 ORTHO05D007424 6.9e-16 88.6 193 38.3
SGA_v2.0_scaffold202G41480 Striga asiatica HOM05D007158 ORTHO05D007424 9.1e-16 88.2 199 45.7
EL10Ac2g04517 Beta vulgaris HOM05D007158 ORTHO05D007424 2.0e-15 87.0 101 50.5
Sabra17G0100100 Salix brachista HOM05D007158 ORTHO05D007424 2.0e-15 87.0 207 36.7
PSO339G0418 Papaver somniferum HOM05D007158 ORTHO05D007424 2.6e-15 86.7 57 71.9
Sed0005493 Sechium edule HOM05D007158 ORTHO05D007424 2.6e-15 86.7 155 40.0
PSO384G2845 Papaver somniferum HOM05D007158 ORTHO05D007424 5.9e-15 85.5 57 70.2
ATR0743G078 Amborella trichopoda HOM05D007158 ORTHO05D007424 1.7e-14 84.0 178 37.1
Dinv33973 Davidia involucrata HOM05D007158 ORTHO05D007424 8.5e-14 81.6 216 33.8
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-13 80.5 79 48.1
Zm00001eb300940 Zea mays HOM05D007158 ORTHO05D007424 4.2e-13 79.3 201 33.3
Oeu061824.1 Olea europaea HOM05D007158 ORTHO05D007424 6.1e-12 75.5 154 38.3
AagrBONN_evm.TU.Sc2ySwM_117.711 Anthoceros agrestis HOM05D007158 ORTHO05D007424 3.9e-11 72.8 62 54.8
AT1G60640 Arabidopsis thaliana HOM05D007158 ORTHO05D007424 1.1e-10 71.2 186 33.9
SMO119G0024 Selaginella moellendorffii HOM05D007158 ORTHO05D007424 1.5e-10 70.9 74 44.6
Rhsim10G0074300 Rhododendron simsii HOM05D007158 ORTHO05D007424 2.8e-09 66.6 166 33.7
Mapoly0099s0058 Marchantia polymorpha HOM05D007158 ORTHO05D007424 8.2e-09 65.1 49 59.2
CARHR052290 Cardamine hirsuta HOM05D007158 ORTHO05D007424 2.4e-08 63.5 183 40.4
AL2G15950 Arabidopsis lyrata HOM05D011338 ORTHO05D007424 3.1e-08 63.2 181 39.2
BolC1t03688H Brassica oleracea HOM05D011338 ORTHO05D007424 7.0e-08 62.0 169 39.6
BraA01t03075Z Brassica rapa HOM05D011338 ORTHO05D007424 2.0e-07 60.5 184 40.8
Carub.0002s0469 Capsella rubella HOM05D007158 ORTHO05D007424 2.0e-07 60.5 170 40.6
CBR_g32195 Chara braunii HOM05D007158 ORTHO05D007424 3.4e-07 59.7 91 37.4
Pp3c14_9040 Physcomitrium patens HOM05D007158 ORTHO05D007424 3.4e-07 59.7 185 35.1
BcaC09g49385 Brassica carinata HOM05D011338 ORTHO05D007424 5.9e-07 58.9 167 40.7
C01p37190 Brassica napus HOM05D011338 ORTHO05D007424 5.9e-07 58.9 167 40.7
Thhalv10023615m.g Eutrema salsugineum HOM05D011338 ORTHO05D007424 7.7e-07 58.5 183 35.0
C04p25850 Brassica napus HOM05D011338 ORTHO05D007424 1.7e-06 57.4 160 38.8
BolC4t24223H Brassica oleracea HOM05D011338 ORTHO05D007424 1.7e-06 57.4 160 38.8
Sp2g04080 Schrenkiella parvula HOM05D011338 ORTHO05D007424 1.7e-06 57.4 184 40.2
A01p29410 Brassica napus HOM05D011338 ORTHO05D007424 2.9e-06 56.6 181 42.0


User provided reference genes

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