Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08097_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 6.9e-63 243.8 124 100.0
TPR.G16541 Trifolium pratense HOM05D004062 ORTHO05D004417 1.8e-47 192.6 129 78.3
Medtr7g082760 Medicago truncatula HOM05D004062 ORTHO05D004417 1.5e-46 189.5 128 78.9
Psat3g097240 Pisum sativum HOM05D004062 ORTHO05D004417 7.7e-46 187.2 127 77.2
Glyma.02G089500 Glycine max HOM05D004062 ORTHO05D004417 1.0e-34 150.2 138 63.8
VMungo1383G2158 Vigna mungo HOM05D004062 ORTHO05D004417 8.8e-34 147.1 137 62.0
Glyma.18G293500 Glycine max HOM05D004062 ORTHO05D004417 9.7e-33 143.7 136 61.8
Phvul.008G008800 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 1.2e-30 136.7 135 59.3
Lj1g0017758 Lotus japonicus HOM05D004062 ORTHO05D004417 1.9e-28 129.4 143 59.4
arahy.Tifrunner.gnm1.ann1.95RUG0 Arachis hypogaea HOM05D004062 ORTHO05D004417 5.5e-28 127.9 133 60.9
arahy.Tifrunner.gnm1.ann1.EB5M6E Arachis hypogaea HOM05D004062 ORTHO05D004417 5.5e-28 127.9 133 60.9
Psat3g097280 Pisum sativum HOM05D004062 ORTHO05D004417 2.3e-26 122.5 132 55.3
Lalb_Chr04g0257671 Lupinus albus HOM05D004062 ORTHO05D004417 4.0e-26 121.7 131 54.2
Glyma.18G293600 Glycine max HOM05D004062 ORTHO05D004417 1.1e-23 113.6 139 55.4
Lj1g0013725 Lotus japonicus HOM05D004062 ORTHO05D004417 1.2e-22 110.2 123 53.7
arahy.Tifrunner.gnm1.ann1.56V7KA Arachis hypogaea HOM05D004062 ORTHO05D004417 2.0e-22 109.4 143 51.7
arahy.Tifrunner.gnm1.ann1.RE711V Arachis hypogaea HOM05D004062 ORTHO05D004417 2.0e-22 109.4 143 51.7
Glyma.02G089400 Glycine max HOM05D004062 ORTHO05D004417 2.7e-22 109.0 137 49.6
Medtr7g082700 Medicago truncatula HOM05D004062 ORTHO05D004417 2.7e-22 109.0 128 53.9
Medtr7g082730 Medicago truncatula HOM05D004062 ORTHO05D004417 4.5e-22 108.2 126 54.8
Medtr7g082740 Medicago truncatula HOM05D004062 ORTHO05D004417 5.9e-22 107.8 129 54.3
Lalb_Chr17g0335981 Lupinus albus HOM05D004062 ORTHO05D004417 7.7e-22 107.5 137 50.4
Medtr7g082750 Medicago truncatula HOM05D004062 ORTHO05D004417 2.9e-21 105.5 131 50.4
Lj1g0027246 Lotus japonicus HOM05D004062 ORTHO05D004417 1.5e-20 103.2 140 47.9
Psat3g097360 Pisum sativum HOM05D004062 ORTHO05D004417 1.9e-20 102.8 127 54.3
Ca_08095_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 5.5e-20 101.3 127 52.8
VMungo1383G0607 Vigna mungo HOM05D004062 ORTHO05D004417 2.1e-19 99.4 136 47.8
TPR.G11392 Trifolium pratense HOM05D004062 ORTHO05D004417 1.8e-18 96.3 117 50.4
Ca_08096_v3 Cicer arietinum L. HOM05D004062 ORTHO05D004417 3.0e-18 95.5 127 48.8
Phvul.008G008700 Phaseolus vulgaris HOM05D004062 ORTHO05D004417 4.4e-17 91.7 136 46.3
Lj1g0018189 Lotus japonicus HOM05D004062 ORTHO05D004417 9.8e-17 90.5 134 47.0
Dinv33967 Davidia involucrata HOM05D004062 ORTHO05D004417 4.1e-15 85.1 130 45.4
Thecc.04G128000 Theobroma cacao HOM05D004062 ORTHO05D004417 7.0e-15 84.3 119 43.7
Dinv34790 Davidia involucrata HOM05D002710 ORTHO05D002905 4.5e-14 81.6 118 44.9
TPR.G16550 Trifolium pratense HOM05D004062 ORTHO05D004417 5.9e-14 81.3 128 44.5
TPR.G16561 Trifolium pratense HOM05D004062 ORTHO05D004417 5.9e-14 81.3 129 45.7
Haze_14190 Corylus avellana HOM05D004062 ORTHO05D004417 2.9e-13 79.0 129 45.7
Duzib138G0221 Durio zibethinus HOM05D004062 ORTHO05D004417 3.8e-13 78.6 121 43.0
Psat3g097320 Pisum sativum HOM05D004062 ORTHO05D004417 5.0e-13 78.2 121 46.3
QL02p050215 Quercus lobata HOM05D004062 ORTHO05D004417 6.5e-13 77.8 131 42.0
CiPaw.03G065300 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.5e-12 76.6 135 38.5
CiPaw.04G044300 Carya illinoinensis HOM05D004062 ORTHO05D004417 1.9e-12 76.3 132 42.4
MBI16_g14296_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 3.2e-12 75.5 116 41.4
TAR629G2241 Trochodendron aralioides HOM05D004062 ORTHO05D004417 3.2e-12 75.5 119 41.2
Lsat_1_v5_gn_3_82781 Lactuca sativa HOM05D004062 ORTHO05D004417 4.2e-12 75.1 115 40.9
COL.COLO4_09380 Corchorus olitorius HOM05D004062 ORTHO05D004417 9.4e-12 73.9 120 42.5
Hma1.2p1_0500F.1_g167200 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 1.6e-11 73.2 120 44.2
MBI16_g14298_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 1.6e-11 73.2 109 40.4
Nn3g17968 Nelumbo nucifera HOM05D004062 ORTHO05D004417 1.6e-11 73.2 118 41.5
Gohir.D11G172800 Gossypium hirsutum HOM05D004062 ORTHO05D004417 2.1e-11 72.8 113 41.6
Gorai.007G185100 Gossypium raimondii HOM05D004062 ORTHO05D004417 2.7e-11 72.4 124 40.3
Gohir.D11G172400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 3.6e-11 72.0 113 41.6
MBI16_g14297_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 4.7e-11 71.6 116 40.5
Sabra17G0098800 Salix brachista HOM05D004062 ORTHO05D004417 4.7e-11 71.6 120 42.5
PGSC0003DMG400016976 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.7e-11 71.6 115 42.6
PGSC0003DMG400030667 Solanum tuberosum HOM05D004062 ORTHO05D004417 4.7e-11 71.6 115 42.6
PGR004G1762 Punica granatum HOM05D004062 ORTHO05D004417 1.4e-10 70.1 119 37.0
Sabra04G0064400 Salix brachista HOM05D004062 ORTHO05D004417 2.3e-10 69.3 117 43.6
SalBow5G1592 Salvia bowleyana HOM05D004062 ORTHO05D004417 2.3e-10 69.3 115 40.9
Migut.H00242 Erythranthe guttata HOM05D004062 ORTHO05D004417 3.0e-10 68.9 129 36.4
Nn4g23971 Nelumbo nucifera HOM05D004062 ORTHO05D004417 3.0e-10 68.9 120 40.0
DCAR_010706 Daucus carota HOM05D004062 ORTHO05D004417 4.0e-10 68.6 125 36.8
Gohir.A11G166400 Gossypium hirsutum HOM05D004062 ORTHO05D004417 4.0e-10 68.6 122 40.2
Potri.004G095150 Populus trichocarpa HOM05D004062 ORTHO05D004417 5.2e-10 68.2 121 43.0
Potri.004G095200 Populus trichocarpa HOM05D004062 ORTHO05D004417 5.2e-10 68.2 121 43.0
Oeu012583.1 Olea europaea HOM05D004062 ORTHO05D004417 1.2e-09 67.0 117 42.7
CSS0019285 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 1.5e-09 66.6 120 39.2
CSS0038275 Camellia sinensis var. sinensis HOM05D004062 ORTHO05D004417 2.0e-09 66.2 120 39.2
MBI18_g04358_MAGBIO Magnolia biondii HOM05D004062 ORTHO05D004417 2.0e-09 66.2 116 37.9
Potri.017G119800 Populus trichocarpa HOM05D004062 ORTHO05D004417 2.6e-09 65.9 121 39.7
Atru.chr1.1607 Acer truncatum HOM05D004062 ORTHO05D004417 3.4e-09 65.5 130 41.5
Eucgr.F02795 Eucalyptus grandis HOM05D004062 ORTHO05D004417 3.4e-09 65.5 125 37.6
Aqoxy3G03996 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 9.8e-09 63.9 124 41.9
Manes.02G072000 Manihot esculenta HOM05D004062 ORTHO05D004417 9.8e-09 63.9 120 42.5
Oeu041981.1 Olea europaea HOM05D004062 ORTHO05D004417 9.8e-09 63.9 114 37.7
SGA_v2.0_scaffold202G41473 Striga asiatica HOM05D004062 ORTHO05D004417 1.7e-08 63.2 114 39.5
MSTRG.23597 Avicennia marina HOM05D004062 ORTHO05D004417 2.2e-08 62.8 117 43.6
DCAR_010707 Daucus carota HOM05D004062 ORTHO05D004417 2.2e-08 62.8 128 38.3
Oeu030797.1 Olea europaea HOM05D004062 ORTHO05D004417 2.2e-08 62.8 110 39.1
Oeu030798.1 Olea europaea HOM05D004062 ORTHO05D004417 2.2e-08 62.8 110 39.1
Cc07_g08490 Coffea canephora HOM05D004062 ORTHO05D004417 2.8e-08 62.4 119 35.3
Oeu047438.1 Olea europaea HOM05D004062 ORTHO05D004417 2.8e-08 62.4 114 40.4
SalBow3G0055 Salvia bowleyana HOM05D004062 ORTHO05D004417 2.8e-08 62.4 89 40.4
DCAR_010708 Daucus carota HOM05D004062 ORTHO05D004417 3.7e-08 62.0 99 42.4
Aqoxy3G03994 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 4.9e-08 61.6 124 37.1
Manes.01G113100 Manihot esculenta HOM05D004062 ORTHO05D004417 6.3e-08 61.2 115 42.6
CANSAT78G1768 Cannabis sativa HOM05D004062 ORTHO05D004417 8.3e-08 60.8 138 34.1
Ciclev10013071m.g Citrus clementina HOM05D004062 ORTHO05D004417 1.4e-07 60.1 116 38.8
DCAR_010711 Daucus carota HOM05D004062 ORTHO05D004417 1.4e-07 60.1 132 37.1
Actinidia15903 Actinidia chinensis HOM05D002710 ORTHO05D002905 3.1e-07 58.9 121 38.0
Potri.010G119200 Populus trichocarpa HOM05D004062 ORTHO05D004417 3.1e-07 58.9 131 32.8
Aqoxy3G03995 Aquilegia oxysepala HOM05D004062 ORTHO05D004417 4.1e-07 58.5 122 38.5
Ciclev10013668m.g Citrus clementina HOM05D004062 ORTHO05D004417 5.4e-07 58.2 122 39.3
DCAR_010710 Daucus carota HOM05D004062 ORTHO05D004417 5.4e-07 58.2 88 40.9
TAR622G0216 Trochodendron aralioides HOM05D004062 ORTHO05D004417 5.4e-07 58.2 118 36.4
Rhsim08G0083900 Rhododendron simsii HOM05D004062 ORTHO05D004417 9.2e-07 57.4 123 39.0
Dinv16146 Davidia involucrata HOM05D004062 ORTHO05D004417 1.6e-06 56.6 107 31.8
Medtr3g100640 Medicago truncatula HOM05D004062 ORTHO05D004417 1.6e-06 56.6 67 49.3
Rhsim09G0103200 Rhododendron simsii HOM05D004062 ORTHO05D004417 1.6e-06 56.6 111 35.1
Sabra10G0089600 Salix brachista HOM05D004062 ORTHO05D004417 1.6e-06 56.6 114 36.0
Ciclev10017837m.g Citrus clementina HOM05D004062 ORTHO05D004417 3.5e-06 55.5 127 31.5
Ciclev10018020m.g Citrus clementina HOM05D004062 ORTHO05D004417 3.5e-06 55.5 125 32.0
Hma1.2p1_0767F.1_g215470 Hydrangea macrophylla HOM05D004062 ORTHO05D004417 3.5e-06 55.5 114 32.5
Ciclev10018255m.g Citrus clementina HOM05D004062 ORTHO05D004417 5.9e-06 54.7 121 35.5
Cpa.g.sc314.3 Carica papaya HOM05D004062 ORTHO05D004417 7.7e-06 54.3 119 35.3


User provided reference genes

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