Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 3.1e-88 328.6 183 100.0
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 1.7e-46 189.9 189 59.8
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 6.6e-46 188.0 199 62.3
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 1.2e-42 177.2 194 62.4
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 1.2e-42 177.2 189 58.2
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 1.5e-42 176.8 183 63.9
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 2.0e-42 176.4 193 58.5
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 2.2e-41 172.9 179 57.5
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 2.9e-41 172.6 179 57.0
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 2.1e-39 166.4 187 57.8
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 1.7e-38 163.3 200 55.0
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 5.1e-38 161.8 182 58.2
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 7.3e-37 157.9 182 57.1
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 4.8e-36 155.2 181 55.2
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 8.1e-36 154.5 181 54.1
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 2.4e-35 152.9 183 54.6
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 2.4e-35 152.9 191 55.0
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 2.4e-35 152.9 181 55.2
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 6.9e-35 151.4 186 54.3
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 1.2e-34 150.6 184 52.7
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 1.2e-34 150.6 184 52.7
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 4.5e-34 148.7 181 54.7
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 5.8e-34 148.3 183 54.6
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 2.9e-33 146.0 177 53.7
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 3.8e-33 145.6 177 55.4
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 1.9e-32 143.3 181 54.1
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 2.4e-32 142.9 182 57.7
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 4.2e-32 142.1 184 52.7
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 9.3e-32 141.0 181 57.5
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 9.3e-32 141.0 183 52.5
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 1.2e-31 140.6 182 51.1
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 2.7e-31 139.4 185 53.0
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 7.9e-31 137.9 182 51.6
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 1.8e-30 136.7 192 49.5
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 3.0e-30 136.0 187 52.9
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 3.9e-30 135.6 206 46.6
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 5.1e-30 135.2 182 49.5
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 6.7e-30 134.8 182 51.1
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 1.1e-29 134.0 206 46.6
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 2.5e-29 132.9 190 51.6
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 4.3e-29 132.1 196 49.5
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 7.4e-29 131.3 186 47.3
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 7.4e-29 131.3 177 53.1
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 9.6e-29 131.0 172 48.8
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 9.6e-29 131.0 190 51.1
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 3.7e-28 129.0 172 48.8
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 4.8e-28 128.6 191 46.6
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 6.2e-28 128.3 187 49.2
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.1e-27 127.5 172 48.3
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 1.4e-27 127.1 159 49.7
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 2.4e-27 126.3 182 52.2
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 2.4e-27 126.3 182 45.6
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 6.9e-27 124.8 192 48.4
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 6.9e-27 124.8 197 48.2
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 6.9e-27 124.8 184 47.8
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 9.0e-27 124.4 195 48.7
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 1.2e-26 124.0 191 48.7
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 2.0e-26 123.2 183 46.4
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.6e-26 122.9 198 48.0
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 3.4e-26 122.5 198 47.0
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 3.4e-26 122.5 198 47.0
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 2.2e-25 119.8 181 48.1
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 2.9e-25 119.4 184 46.7
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 1.4e-24 117.1 200 45.5
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 1.4e-24 117.1 187 46.5
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 1.9e-24 116.7 171 50.3
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 2.4e-24 116.3 183 47.5
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 2.4e-24 116.3 190 50.0
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 7.1e-24 114.8 184 42.4
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 1.2e-23 114.0 182 47.3
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.6e-23 113.6 195 44.6
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 2.1e-23 113.2 183 46.4
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.7e-23 112.8 169 46.7
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 2.7e-23 112.8 195 45.6
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 7.9e-23 111.3 169 46.7
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 7.9e-23 111.3 122 58.2
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.3e-22 110.5 182 44.5
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 6.7e-22 108.2 207 38.2
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 6.7e-22 108.2 184 42.9
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 1.9e-21 106.7 208 38.5
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 2.5e-21 106.3 157 46.5
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 2.5e-21 106.3 195 39.0
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 3.3e-21 105.9 178 41.6
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 1.6e-20 103.6 165 43.6
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 2.1e-20 103.2 167 42.5
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 3.7e-20 102.4 163 43.6
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 6.2e-20 101.7 189 41.3
Psat1g081000 Pisum sativum HOM05D004795 ORTHO05D005518 8.2e-20 101.3 233 40.3
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 2.4e-19 99.8 126 51.6
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 3.1e-19 99.4 146 50.7
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 5.3e-19 98.6 187 42.2
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 5.3e-19 98.6 209 39.2
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 6.9e-19 98.2 141 47.5
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 6.9e-19 98.2 141 46.8
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 9.0e-19 97.8 130 52.3
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 9.0e-19 97.8 189 40.7
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 1.5e-18 97.1 180 41.1
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 2.6e-18 96.3 202 38.1
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 5.8e-18 95.1 161 42.2
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 1.0e-17 94.4 189 38.6
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 4.9e-17 92.0 206 36.9
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 6.5e-17 91.7 213 37.1
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 8.4e-17 91.3 186 38.7
Gohir.A12G054400 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.4e-16 90.5 141 45.4
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 1.9e-16 90.1 183 39.9
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 4.2e-16 89.0 161 40.4
Gorai.001G202200 Gossypium raimondii HOM05D004795 ORTHO05D005518 7.1e-16 88.2 123 47.2
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 9.3e-16 87.8 207 33.8
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 9.3e-16 87.8 207 33.8
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 9.3e-16 87.8 207 33.8
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 9.3e-16 87.8 207 33.8
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 9.3e-16 87.8 203 36.0
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 1.6e-15 87.0 212 36.3
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 1.6e-15 87.0 180 39.4
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 2.1e-15 86.7 207 35.7
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 3.5e-15 85.9 123 52.8
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 4.6e-15 85.5 188 36.7
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 4.6e-15 85.5 187 36.4
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.0e-14 84.3 237 33.3
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.3e-14 84.0 124 48.4
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 2.3e-14 83.2 196 42.9
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 2.3e-14 83.2 177 37.9
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.3e-14 83.2 241 32.8
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 3.0e-14 82.8 231 33.8
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 3.0e-14 82.8 177 37.3
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 3.9e-14 82.4 201 34.8
Potri.004G098200 Populus trichocarpa HOM05D004795 ORTHO05D005518 5.1e-14 82.0 77 58.4
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 1.1e-13 80.9 182 35.7
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.1e-13 80.9 124 47.6
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 3.3e-13 79.3 113 48.7
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 4.3e-13 79.0 154 35.7
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 4.3e-13 79.0 197 36.5
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 5.7e-13 78.6 181 35.4
ATR0752G028 Amborella trichopoda HOM05D004795 ORTHO05D005518 9.7e-13 77.8 172 39.0
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 9.7e-13 77.8 190 35.3
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.8e-12 76.3 137 41.6
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 8.2e-12 74.7 185 34.1
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 1.1e-11 74.3 165 33.3
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 5.3e-11 72.0 103 45.6
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 1.2e-10 70.9 172 34.9
Thecc.07G096700 Theobroma cacao HOM05D004795 ORTHO05D002259 2.6e-10 69.7 111 45.9
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 2.2e-09 66.6 176 36.4
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 2.9e-09 66.2 182 31.3
SalBow7G1622 Salvia bowleyana HOM05D004795 ORTHO05D005518 7.2e-08 61.6 119 42.9
SalBow7G4115 Salvia bowleyana HOM05D004795 ORTHO05D005518 7.2e-08 61.6 119 42.9
Ca_04370_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 2.7e-07 59.7 55 69.1
SalBow5G0757 Salvia bowleyana HOM05D004795 ORTHO05D005518 6.1e-07 58.5 105 46.7
unitig_748.g8746 Utricularia gibba HOM05D004795 ORTHO05D005518 1.4e-06 57.4 122 36.9
Gohir.A07G174000 Gossypium hirsutum HOM05D004795 ORTHO05D005518 8.8e-06 54.7 83 42.2


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