Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 1.2e-191 672.9 332 100.0
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 2.8e-183 645.2 328 96.3
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 1.2e-181 639.8 330 95.8
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 2.4e-179 632.1 331 94.3
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.7e-169 599.4 327 89.9
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 1.0e-166 590.1 329 88.8
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 1.0e-161 573.5 329 85.7
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.7e-156 556.2 341 82.4
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 8.3e-156 553.9 328 81.1
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.9e-155 552.7 328 82.0
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 2.4e-155 552.4 341 81.8
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.4e-155 552.4 321 82.6
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.6e-154 549.7 317 83.3
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.6e-154 549.7 326 81.0
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 3.5e-154 548.5 327 81.7
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 6.0e-154 547.7 327 81.7
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 7.8e-154 547.4 322 83.5
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 1.0e-153 547.0 327 81.7
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 2.3e-153 545.8 322 81.7
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 3.0e-153 545.4 322 82.9
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 5.1e-153 544.7 317 83.0
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.5e-152 543.1 327 82.0
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 5.6e-152 541.2 318 82.7
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 9.5e-152 540.4 320 82.2
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.2e-151 540.0 317 83.3
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 1.6e-151 539.7 329 79.9
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 2.8e-151 538.9 321 81.9
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.1e-150 537.0 318 81.1
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 5.2e-150 534.6 330 81.2
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 5.8e-149 531.2 333 78.1
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 1.3e-148 530.0 317 82.0
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.3e-148 530.0 324 80.6
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.3e-148 530.0 327 79.8
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 2.2e-148 529.3 321 80.4
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 2.2e-148 529.3 333 78.1
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 3.8e-148 528.5 318 81.1
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 8.4e-148 527.3 332 78.3
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 1.9e-147 526.2 335 78.2
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.9e-147 526.2 316 81.6
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 2.4e-147 525.8 322 79.8
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 3.2e-147 525.4 317 80.1
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 3.5e-146 521.9 311 81.4
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 4.6e-146 521.5 324 77.8
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.0e-145 520.4 320 78.8
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 1.3e-145 520.0 359 73.5
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 3.9e-145 518.5 317 79.8
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.1e-145 518.1 304 80.9
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.1e-144 516.9 358 73.5
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 1.5e-144 516.5 317 79.5
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 3.3e-144 515.4 324 77.5
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.3e-144 514.2 328 77.1
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 2.1e-143 512.7 301 82.7
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.7e-143 511.5 325 77.5
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 2.4e-142 509.2 304 81.2
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 3.1e-142 508.8 322 75.2
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 1.2e-141 506.9 317 77.3
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 1.2e-141 506.9 327 76.1
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.2e-141 506.9 317 77.3
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.2e-141 506.9 321 77.6
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.5e-141 506.5 317 76.7
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.4e-141 505.4 325 76.3
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 3.4e-141 505.4 321 77.6
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.4e-141 505.4 317 78.9
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.7e-140 503.1 329 75.7
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 2.9e-140 502.3 317 76.3
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 2.9e-140 502.3 327 75.2
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 2.9e-140 502.3 328 75.6
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 3.8e-140 501.9 321 75.4
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 6.4e-140 501.1 327 74.6
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 9.3e-139 497.3 322 75.2
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 3.0e-137 492.3 317 75.4
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.0e-137 492.3 348 71.3
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 2.4e-134 482.6 296 79.1
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 9.0e-134 480.7 317 74.8
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 2.9e-132 475.7 296 78.0
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 4.9e-132 474.9 314 73.6
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.0e-129 467.2 320 72.2
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.0e-129 467.2 277 83.8
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 1.3e-129 466.8 343 68.8
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 1.3e-129 466.8 343 68.8
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 3.0e-129 465.7 296 77.0
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.1e-129 464.9 354 66.9
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 5.1e-129 464.9 365 66.6
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.1e-128 463.8 281 79.4
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.9e-128 463.0 284 80.3
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 7.4e-128 461.1 296 78.7
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 3.7e-127 458.8 344 68.6
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 4.8e-127 458.4 318 72.0
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 4.9e-124 448.4 320 72.2
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.1e-123 447.2 267 79.4
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 2.4e-123 446.0 320 68.1
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.4e-123 446.0 299 73.2
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 7.1e-123 444.5 370 63.2
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 4.6e-122 441.8 324 69.1
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 6.0e-122 441.4 282 77.3
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 6.7e-121 438.0 279 76.0
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 7.6e-117 424.5 372 61.6
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 4.9e-116 421.8 328 66.8
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.9e-112 409.8 264 76.5
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 2.5e-112 409.5 292 68.2
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 6.3e-111 404.8 319 60.8
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 8.2e-111 404.4 307 64.8
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.1e-107 394.0 326 59.8
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.1e-107 394.0 309 65.0
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.4e-107 393.7 232 82.3
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 3.2e-107 392.5 279 70.3
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 3.0e-105 386.0 318 60.1
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 3.4e-101 372.5 318 58.5
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 4.7e-98 362.1 269 68.4
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 2.6e-96 356.3 279 67.7
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 3.8e-92 342.4 232 69.8
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 1.4e-91 340.5 314 53.5
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 3.6e-90 335.9 248 67.3
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 1.3e-87 327.4 230 66.5
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.1e-82 310.1 220 69.5
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 5.0e-76 288.9 225 66.7
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 2.8e-71 273.1 364 43.1
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 1.8e-65 253.8 162 80.9
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.9e-54 217.2 172 64.5
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 5.0e-52 209.1 142 72.5
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 2.8e-50 203.4 330 39.1
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 7.8e-45 185.3 129 69.0
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 8.3e-39 165.2 127 60.6
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 7.1e-38 162.2 282 37.2
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.4e-32 143.3 97 69.1
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 2.5e-19 100.5 82 59.8
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 1.8e-17 94.4 71 64.8
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 2.6e-16 90.5 45 88.9
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.2e-14 83.6 116 48.3


User provided reference genes

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