Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 1.9e-60 235.7 126 100.0
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 1.6e-54 216.1 128 90.6
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 1.3e-53 213.0 128 88.3
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 1.4e-50 203.0 126 85.7
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 4.4e-49 198.0 126 81.7
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 9.8e-49 196.8 126 80.2
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 4.9e-48 194.5 131 80.9
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 9.2e-47 190.3 124 79.8
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 3.5e-46 188.3 124 79.0
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 5.6e-44 181.0 128 76.6
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 7.3e-44 180.6 127 76.4
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 2.3e-37 159.1 143 59.4
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 3.0e-37 158.7 143 60.8
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 6.6e-37 157.5 137 62.8
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 8.6e-37 157.1 143 60.1
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 8.6e-37 157.1 150 58.7
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 8.6e-37 157.1 148 58.8
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 1.1e-36 156.8 134 64.2
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 1.9e-36 156.0 139 60.4
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 1.9e-36 156.0 139 60.4
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 2.5e-36 155.6 150 58.0
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 3.3e-36 155.2 143 59.4
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 4.3e-36 154.8 152 57.9
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 5.6e-36 154.5 145 60.7
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 7.3e-36 154.1 134 61.2
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 7.3e-36 154.1 133 63.9
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 7.3e-36 154.1 143 60.1
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 9.5e-36 153.7 134 62.7
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 9.5e-36 153.7 162 55.6
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 9.5e-36 153.7 133 60.9
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 9.5e-36 153.7 133 60.9
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 9.5e-36 153.7 131 62.6
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 9.5e-36 153.7 132 64.4
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 9.5e-36 153.7 133 61.7
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 1.6e-35 152.9 134 61.2
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.6e-35 152.9 132 62.1
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 2.1e-35 152.5 131 61.8
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 2.8e-35 152.1 140 58.6
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 2.8e-35 152.1 134 60.4
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 2.8e-35 152.1 138 61.6
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 2.8e-35 152.1 145 55.9
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 3.6e-35 151.8 147 57.1
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 3.6e-35 151.8 149 57.7
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 4.7e-35 151.4 131 61.8
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.1e-34 150.2 128 65.6
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 1.1e-34 150.2 137 62.0
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 1.1e-34 150.2 125 64.0
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 1.4e-34 149.8 147 57.8
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.8e-34 149.4 132 62.9
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 1.8e-34 149.4 142 57.7
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.8e-34 149.4 145 55.9
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 2.3e-34 149.1 143 57.3
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.3e-34 149.1 133 60.2
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 4.0e-34 148.3 116 67.2
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 4.0e-34 148.3 138 60.9
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 4.0e-34 148.3 141 61.7
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 4.0e-34 148.3 147 58.5
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 5.2e-34 147.9 162 56.2
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 5.2e-34 147.9 145 55.2
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 5.2e-34 147.9 145 55.2
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 5.2e-34 147.9 145 58.6
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 6.8e-34 147.5 147 59.9
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.2e-33 146.7 133 59.4
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 1.5e-33 146.4 125 60.8
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 2.6e-33 145.6 131 58.8
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.6e-33 145.6 139 56.8
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.6e-33 145.6 139 56.8
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 3.4e-33 145.2 130 59.2
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 4.4e-33 144.8 142 57.7
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 5.8e-33 144.4 115 66.1
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 5.8e-33 144.4 151 55.6
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 5.8e-33 144.4 128 59.4
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 7.6e-33 144.1 115 67.0
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 9.9e-33 143.7 126 64.3
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 1.3e-32 143.3 143 57.3
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.7e-32 142.9 136 60.3
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 2.9e-32 142.1 145 57.9
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 2.9e-32 142.1 145 57.9
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 3.7e-32 141.7 125 59.2
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 6.4e-32 141.0 148 54.7
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 8.4e-32 140.6 142 59.9
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 8.4e-32 140.6 133 57.9
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 1.1e-31 140.2 125 58.4
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 1.1e-31 140.2 151 53.0
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 3.2e-31 138.7 136 59.6
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 4.1e-31 138.3 150 56.7
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 7.1e-31 137.5 132 60.6
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 7.1e-31 137.5 120 59.2
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 7.1e-31 137.5 149 53.7
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 7.1e-31 137.5 149 55.7
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 9.2e-31 137.1 149 52.3
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 4.6e-30 134.8 122 57.4
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 1.3e-29 133.3 143 55.2
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 1.7e-29 132.9 126 54.8
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 3.0e-29 132.1 133 57.9
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 3.0e-29 132.1 134 54.5
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 3.9e-29 131.7 142 54.2
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 5.1e-29 131.3 145 53.8
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 8.6e-29 130.6 138 51.4
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 8.6e-29 130.6 128 54.7
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 1.9e-28 129.4 117 57.3
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 1.9e-28 129.4 117 57.3
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 1.9e-28 129.4 117 57.3
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 1.9e-28 129.4 117 57.3
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 3.6e-27 125.2 122 55.7
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 4.7e-27 124.8 144 51.4
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 6.2e-27 124.4 117 57.3
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 1.1e-26 123.6 139 49.6
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 6.8e-26 120.9 136 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 1.7e-24 116.3 129 54.3
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 4.9e-24 114.8 139 51.8
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 4.2e-23 111.7 134 47.8
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 7.8e-22 107.5 116 50.0
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.0e-21 107.1 154 45.5
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.3e-21 106.7 105 55.2
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 8.7e-21 104.0 106 56.6
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.9e-20 102.8 121 47.1
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 8.1e-19 97.4 116 51.7
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 3.1e-18 95.5 144 45.1
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 2.2e-16 89.4 119 45.4
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 1.1e-15 87.0 110 46.4
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 3.2e-15 85.5 129 43.4
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 7.1e-15 84.3 60 68.3
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 1.2e-14 83.6 60 68.3
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 7.9e-14 80.9 81 54.3
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 5.6e-12 74.7 120 39.2
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.8e-10 69.7 101 41.6
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.2e-09 67.0 60 56.7
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 1.6e-06 56.6 44 63.6
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 3.5e-06 55.5 111 33.3
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 6.0e-06 54.7 61 47.5


User provided reference genes

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