Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 4.8e-126 454.5 233 100.0
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 3.8e-107 391.7 233 82.4
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 5.4e-101 371.3 234 80.8
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 8.3e-94 347.4 233 76.0
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 1.2e-92 343.6 233 76.4
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 1.5e-90 336.7 234 72.2
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 1.9e-90 336.3 237 75.1
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 4.3e-90 335.1 233 73.0
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 1.6e-89 333.2 233 70.0
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 6.2e-89 331.3 233 72.1
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 3.1e-88 328.9 233 72.5
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 2.6e-87 325.9 234 70.1
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 4.4e-87 325.1 234 70.9
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 2.0e-79 299.7 234 65.8
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 3.2e-77 292.4 233 65.7
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 7.1e-77 291.2 234 63.7
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 6.0e-76 288.1 232 62.9
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 1.0e-75 287.3 236 65.3
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 1.0e-75 287.3 230 66.1
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 1.0e-75 287.3 232 62.9
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 2.3e-75 286.2 230 63.9
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 1.9e-74 283.1 237 62.4
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 2.5e-74 282.7 228 61.0
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 1.1e-72 277.3 230 60.9
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.8e-72 276.6 230 64.3
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 2.4e-72 276.2 231 61.9
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 3.1e-72 275.8 231 61.9
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 3.1e-72 275.8 231 61.9
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 3.1e-72 275.8 234 59.8
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 4.0e-72 275.4 227 62.6
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 6.9e-72 274.6 232 62.5
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 8.9e-72 274.2 231 61.5
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 8.9e-72 274.2 231 61.0
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 1.2e-71 273.9 228 61.0
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.2e-71 273.9 233 58.4
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 2.6e-71 272.7 231 61.0
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 4.4e-71 271.9 236 60.2
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 5.8e-71 271.6 198 66.7
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 7.6e-71 271.2 234 58.1
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 9.9e-71 270.8 231 63.6
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 1.3e-70 270.4 198 66.2
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 2.9e-70 269.2 233 60.5
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 2.9e-70 269.2 231 60.6
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 2.9e-70 269.2 198 66.2
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 1.4e-69 266.9 231 59.7
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 2.4e-69 266.2 234 61.1
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 3.2e-69 265.8 232 59.1
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 4.2e-69 265.4 227 59.9
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.2e-68 263.8 197 67.0
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 1.2e-68 263.8 229 59.8
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 1.6e-68 263.5 229 59.8
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 2.7e-68 262.7 192 66.1
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 3.5e-68 262.3 233 55.8
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 3.5e-68 262.3 234 61.1
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 4.6e-68 261.9 199 66.3
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 1.3e-67 260.4 228 59.2
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 2.3e-67 259.6 189 67.2
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 5.1e-67 258.5 233 55.4
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 6.6e-67 258.1 216 60.6
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 8.7e-67 257.7 230 57.4
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 1.1e-66 257.3 230 56.5
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 1.9e-66 256.5 231 56.3
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 5.6e-66 255.0 231 55.8
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 4.8e-65 251.9 227 55.9
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 6.2e-65 251.5 192 64.6
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 4.0e-64 248.8 228 58.8
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 5.3e-64 248.4 192 63.0
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 5.3e-64 248.4 231 55.8
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 1.2e-63 247.3 230 54.3
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 1.5e-63 246.9 198 63.6
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 9.9e-63 244.2 230 53.9
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 2.2e-62 243.0 234 54.3
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 4.9e-62 241.9 193 64.8
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 6.4e-62 241.5 227 55.5
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 1.1e-61 240.7 229 52.4
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 1.9e-61 240.0 229 52.0
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 2.4e-61 239.6 193 60.1
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 3.2e-61 239.2 194 57.7
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 4.2e-61 238.8 195 59.0
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 9.3e-61 237.7 228 55.7
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 9.3e-61 237.7 194 56.7
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 1.6e-60 236.9 181 61.3
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 2.1e-60 236.5 193 58.0
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 6.0e-60 235.0 194 55.7
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 6.0e-60 235.0 253 53.0
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 6.0e-60 235.0 229 52.0
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 7.9e-60 234.6 193 57.5
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 7.9e-60 234.6 193 57.5
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 7.9e-60 234.6 229 51.5
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 1.0e-59 234.2 230 57.4
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 1.0e-59 234.2 188 58.5
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 1.8e-59 233.4 194 57.7
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 1.8e-59 233.4 245 52.2
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 3.0e-59 232.6 194 55.7
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 6.7e-59 231.5 203 55.7
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 6.7e-59 231.5 245 51.8
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 1.1e-58 230.7 188 57.4
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.5e-58 230.3 245 51.8
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.5e-58 230.3 230 50.9
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.9e-58 229.9 199 60.8
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 4.3e-58 228.8 244 50.8
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 7.4e-58 228.0 215 55.8
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 7.4e-58 228.0 176 66.5
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 9.6e-58 227.6 194 55.2
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 2.1e-57 226.5 200 57.0
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 3.7e-57 225.7 263 49.4
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 4.8e-57 225.3 195 55.9
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 6.2e-57 224.9 229 55.5
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 8.1e-57 224.6 218 52.8
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 1.4e-56 223.8 229 54.6
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 2.4e-56 223.0 229 52.8
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 7.6e-55 218.0 259 45.6
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 6.4e-54 214.9 196 52.6
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 4.6e-52 208.8 187 56.7
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.6e-49 200.3 180 56.7
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 2.1e-49 199.9 142 66.2
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 3.1e-48 196.1 180 55.0
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 2.0e-47 193.4 196 50.5
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 2.6e-47 193.0 167 56.3
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 1.2e-44 184.1 171 52.0
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 2.7e-44 183.0 149 61.7
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 6.0e-44 181.8 231 47.2
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 6.7e-43 178.3 123 69.9
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 7.4e-42 174.9 230 43.5
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 1.2e-39 167.5 235 43.4
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 2.9e-38 162.9 198 45.5
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 5.1e-35 152.1 154 49.4
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 3.3e-34 149.4 200 41.5
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 1.7e-33 147.1 134 52.2
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 4.1e-32 142.5 223 39.0
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 1.6e-28 130.6 236 36.9
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 6.1e-28 128.6 183 41.5
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 1.4e-27 127.5 184 40.8
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 2.0e-26 123.6 206 36.9
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 1.5e-23 114.0 143 43.4
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 6.5e-22 108.6 115 47.0
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 2.5e-21 106.7 76 68.4
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 1.1e-18 97.8 88 56.8
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 3.1e-16 89.7 95 48.4
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 7.2e-13 78.6 77 46.8
Cre02.g086750 Chlamydomonas reinhardtii HOM05D004951 ORTHO05D005840 2.4e-08 63.5 182 24.2
FAN27G0705 Fragaria x ananassa HOM05D004951 ORTHO05D005840 9.1e-08 61.6 93 41.9
CBR_g74690 Chara braunii HOM05D004951 ORTHO05D005840 1.6e-07 60.8 159 30.8
MELO3C003766.2 Cucumis melo HOM05D004951 ORTHO05D005840 1.7e-06 57.4 35 77.1


User provided reference genes

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