Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07962_v3 Cicer arietinum L. HOM05D004825 ORTHO05D005415 3.5e-83 311.6 161 100.0
TPR.G29414 Trifolium pratense HOM05D004825 ORTHO05D005415 1.6e-51 206.5 156 70.5
Lj1g0016449 Lotus japonicus HOM05D004825 ORTHO05D005415 1.9e-49 199.5 155 69.0
Medtr7g079500 Medicago truncatula HOM05D004825 ORTHO05D005415 5.3e-47 191.4 155 68.4
Glyma.18G240200 Glycine max HOM05D004825 ORTHO05D005415 1.4e-44 183.3 158 62.7
Phvul.008G056000 Phaseolus vulgaris HOM05D004825 ORTHO05D005415 3.0e-42 175.6 159 61.6
VMungo1383G1726 Vigna mungo HOM05D004825 ORTHO05D005415 8.7e-42 174.1 158 61.4
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea HOM05D004825 ORTHO05D005415 1.3e-32 143.7 165 54.5
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea HOM05D004825 ORTHO05D005415 2.8e-32 142.5 165 54.5
Lalb_Chr19g0126781 Lupinus albus HOM05D004825 ORTHO05D005415 1.5e-25 120.2 171 45.6
Manes.09G172300 Manihot esculenta HOM05D004825 ORTHO05D005415 7.2e-20 101.3 175 45.1
Manes.09G184100 Manihot esculenta HOM05D004825 ORTHO05D005415 9.4e-20 100.9 175 45.1
Haze_04525 Corylus avellana HOM05D004825 ORTHO05D005415 3.9e-18 95.5 172 42.4
Cfa006284 Carpinus fangiana HOM05D004825 ORTHO05D005415 2.0e-17 93.2 172 41.9
Atru.chr12.2135 Acer truncatum HOM05D004825 ORTHO05D005415 4.4e-17 92.0 155 40.6
CiPaw.07G074800 Carya illinoinensis HOM05D004825 ORTHO05D005415 2.2e-16 89.7 170 41.8
TWI59G0982 Tripterygium wilfordii HOM05D004825 ORTHO05D005415 6.9e-15 84.7 166 45.2
Actinidia06813 Actinidia chinensis HOM05D004825 ORTHO05D005415 1.0e-13 80.9 160 39.4
Dinv09864 Davidia involucrata HOM05D004825 ORTHO05D005415 1.0e-13 80.9 112 44.6
MD12G1258300 Malus domestica HOM05D004825 ORTHO05D005415 1.7e-13 80.1 166 39.8
Duzib128G0048 Durio zibethinus HOM05D004825 ORTHO05D005415 3.8e-13 79.0 155 37.4
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla HOM05D004825 ORTHO05D005415 3.8e-13 79.0 176 35.2
FAN05G3281 Fragaria x ananassa HOM05D004825 ORTHO05D005415 6.5e-13 78.2 169 39.1
Gohir.A09G053832 Gossypium hirsutum HOM05D004825 ORTHO05D005415 8.5e-13 77.8 155 37.4
PGR119G0192 Punica granatum HOM05D004825 ORTHO05D005415 8.5e-13 77.8 171 38.0
Gohir.D09G053068 Gossypium hirsutum HOM05D004825 ORTHO05D005415 1.1e-12 77.4 155 37.4
Gorai.006G054700 Gossypium raimondii HOM05D004825 ORTHO05D005415 1.1e-12 77.4 155 37.4
Solyc11g018720.1 Solanum lycopersicum HOM05D004825 ORTHO05D005415 1.9e-12 76.6 125 42.4
Sopen11g009760 Solanum pennellii HOM05D004825 ORTHO05D005415 1.9e-12 76.6 125 42.4
Cc09_g03390 Coffea canephora HOM05D004825 ORTHO05D005415 2.5e-12 76.3 164 37.8
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 3.2e-12 75.9 66 54.5
BcaB01g01166 Brassica carinata HOM05D004825 ORTHO05D005415 3.2e-12 75.9 163 40.5
Carub.0005s1010 Capsella rubella HOM05D004825 ORTHO05D005415 3.2e-12 75.9 164 39.6
DCAR_003341 Daucus carota HOM05D004825 ORTHO05D005415 3.2e-12 75.9 90 44.4
Sabra13G0069900 Salix brachista HOM05D004825 ORTHO05D005415 3.2e-12 75.9 161 37.3
Nitab4.5_0000167g0010 Nicotiana tabacum HOM05D004825 ORTHO05D005415 4.2e-12 75.5 101 41.6
THA.LOC104814783 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 4.2e-12 75.5 163 38.0
TAR374G0592 Trochodendron aralioides HOM05D004825 ORTHO05D005415 4.2e-12 75.5 177 35.0
FAN14G5305 Fragaria x ananassa HOM05D004825 ORTHO05D005415 5.5e-12 75.1 171 37.4
QL02p047782 Quercus lobata HOM05D004825 ORTHO05D005415 5.5e-12 75.1 165 37.6
MBI11_g43072_MAGBIO Magnolia biondii HOM05D004825 ORTHO05D005415 9.4e-12 74.3 174 36.8
Nitab4.5_0004158g0060 Nicotiana tabacum HOM05D004825 ORTHO05D005415 9.4e-12 74.3 122 37.7
Cpa.g.sc18.187 Carica papaya HOM05D004825 ORTHO05D005415 1.6e-11 73.6 179 38.0
Nn3g16227 Nelumbo nucifera HOM05D004825 ORTHO05D005415 1.6e-11 73.6 107 43.9
Eucgr.B01387 Eucalyptus grandis HOM05D004825 ORTHO05D005415 2.1e-11 73.2 164 34.8
Ah.06g195620 Amaranthus hybridus HOM05D004825 ORTHO05D005415 2.7e-11 72.8 163 36.8
AUR62006702 Chenopodium quinoa HOM05D004825 ORTHO05D005415 2.7e-11 72.8 163 37.4
Ciclev10007912m.g Citrus clementina HOM05D004825 ORTHO05D005415 2.7e-11 72.8 165 37.0
AUR62000357 Chenopodium quinoa HOM05D004825 ORTHO05D005415 3.6e-11 72.4 61 55.7
AL5G22530 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 4.7e-11 72.0 163 38.0
PGR119G2407 Punica granatum HOM05D004825 ORTHO05D005415 4.7e-11 72.0 161 33.5
PGSC0003DMG402000916 Solanum tuberosum HOM05D004825 ORTHO05D005415 6.1e-11 71.6 126 38.1
MSTRG.10886 Avicennia marina HOM05D004825 ORTHO05D005415 1.0e-10 70.9 150 36.0
FAN09G1822 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.0e-10 70.9 105 41.9
Sopen11g007800 Solanum pennellii HOM05D004825 ORTHO05D005415 1.0e-10 70.9 122 36.9
Thecc.05G205800 Theobroma cacao HOM05D004825 ORTHO05D005415 1.0e-10 70.9 157 36.3
CAN.G1086.4 Capsicum annuum HOM05D004825 ORTHO05D005415 1.4e-10 70.5 126 34.1
Prupe.6G359000 Prunus persica HOM05D004825 ORTHO05D005415 1.4e-10 70.5 162 36.4
CsaV3_2G010380 Cucumis sativus L. HOM05D004825 ORTHO05D005415 1.8e-10 70.1 174 33.9
GSVIVG01019145001 Vitis vinifera HOM05D004825 ORTHO05D005415 1.8e-10 70.1 174 36.2
Potri.013G087950 Populus trichocarpa HOM05D004825 ORTHO05D005415 3.0e-10 69.3 165 36.4
SGA_v2.0_scaffold122G33281 Striga asiatica HOM05D004825 ORTHO05D005415 3.0e-10 69.3 60 58.3
A06p22020 Brassica napus HOM05D004825 ORTHO05D005415 6.7e-10 68.2 160 38.1
CARHR104500 Cardamine hirsuta HOM05D004825 ORTHO05D005415 6.7e-10 68.2 165 36.4
FAN02G3908 Fragaria x ananassa HOM05D004825 ORTHO05D005415 6.7e-10 68.2 131 37.4
MELO3C008585.2 Cucumis melo HOM05D004825 ORTHO05D005415 8.8e-10 67.8 171 34.5
Thhalv10010266m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 8.8e-10 67.8 173 36.4
Sc06g0005090 Simmondsia chinensis HOM05D004825 ORTHO05D005415 8.8e-10 67.8 163 34.4
AT3G44370 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 1.5e-09 67.0 63 49.2
ClCG11G007440 Citrullus lanatus HOM05D004825 ORTHO05D005415 1.5e-09 67.0 179 33.5
RcHm_v2.0_Chr3g0448251 Rosa chinensis HOM05D004825 ORTHO05D005415 1.5e-09 67.0 70 45.7
Hund07323 Selenicereus undatus HOM05D004825 ORTHO05D005415 2.6e-09 66.2 160 34.4
BcaC01g02045 Brassica carinata HOM05D004825 ORTHO05D005415 4.4e-09 65.5 160 36.2
C03p69210 Brassica napus HOM05D004825 ORTHO05D005415 4.4e-09 65.5 160 36.2
BolC3t19174H Brassica oleracea HOM05D004825 ORTHO05D005415 4.4e-09 65.5 160 36.2
BraA06t25290Z Brassica rapa HOM05D004825 ORTHO05D005415 4.4e-09 65.5 160 37.5
COL.COLO4_07809 Corchorus olitorius HOM05D004825 ORTHO05D005415 4.4e-09 65.5 64 43.8
Sed0020944 Sechium edule HOM05D004825 ORTHO05D005415 5.7e-09 65.1 172 33.7
Lsat_1_v5_gn_8_2080 Lactuca sativa HOM05D004825 ORTHO05D005415 7.4e-09 64.7 67 46.3
Sp5g16820 Schrenkiella parvula HOM05D004825 ORTHO05D005415 7.4e-09 64.7 167 37.7
BcaB05g24081 Brassica carinata HOM05D004825 ORTHO05D005415 1.3e-08 63.9 61 45.9
HanXRQChr01g0025761 Helianthus annuus HOM05D004825 ORTHO05D005415 1.3e-08 63.9 107 36.4
Carub.0002s1042 Capsella rubella HOM05D004825 ORTHO05D005415 1.7e-08 63.5 60 48.3
Migut.I01185 Erythranthe guttata HOM05D004825 ORTHO05D005415 2.2e-08 63.2 157 33.8
BcaC03g14673 Brassica carinata HOM05D004825 ORTHO05D005415 2.8e-08 62.8 156 34.0
RcHm_v2.0_Chr3g0448211 Rosa chinensis HOM05D004825 ORTHO05D005415 2.8e-08 62.8 170 34.7
BolC2t08253H Brassica oleracea HOM05D004825 ORTHO05D005415 3.7e-08 62.4 152 34.2
Thhalv10022463m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 4.8e-08 62.0 125 36.0
Aa31LG2G2270 Aethionema arabicum HOM05D004825 ORTHO05D005415 1.1e-07 60.8 139 38.1
AL2G19720 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 1.1e-07 60.8 60 46.7
A02p13010 Brassica napus HOM05D004825 ORTHO05D005415 1.1e-07 60.8 146 33.6
CANSAT54G0263 Cannabis sativa HOM05D004825 ORTHO05D005415 1.1e-07 60.8 168 33.3
Os06g0171600 Oryza sativa ssp. japonica HOM05D004825 ORTHO05D005415 1.1e-07 60.8 71 46.5
MD12G1258500 Malus domestica HOM05D004825 ORTHO05D005415 1.4e-07 60.5 147 34.7
Aqoxy1G01799 Aquilegia oxysepala HOM05D004825 ORTHO05D005415 1.8e-07 60.1 168 31.5
HPP92_007971 Vanilla planifolia HOM05D004825 ORTHO05D005415 2.4e-07 59.7 56 48.2
EL10Ac4g09418 Beta vulgaris HOM05D004825 ORTHO05D005415 3.1e-07 59.3 161 32.3
BraA02t06357Z Brassica rapa HOM05D004825 ORTHO05D005415 3.1e-07 59.3 146 33.6
DCAR_026472 Daucus carota HOM05D004825 ORTHO05D005415 3.1e-07 59.3 56 46.4
AT1G65080 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 4.1e-07 58.9 151 38.4
PSO478G4613 Papaver somniferum HOM05D004825 ORTHO05D005415 5.3e-07 58.5 173 34.1
C02p21130 Brassica napus HOM05D004825 ORTHO05D005415 7.0e-07 58.2 150 33.3
ATR0582G066 Amborella trichopoda HOM05D004825 ORTHO05D005415 9.1e-07 57.8 76 42.1
CDE02G0647 Ceratophyllum demersum HOM05D004825 ORTHO05D005415 1.6e-06 57.0 104 33.7
SalBow6G0845 Salvia bowleyana HOM05D004825 ORTHO05D005415 1.6e-06 57.0 56 51.8
THA.LOC104805710 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 2.6e-06 56.2 146 32.2


User provided reference genes

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