Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07952_v3 Cicer arietinum L. HOM05D020876 ORTHO05D034584 2.2e-185 652.1 319 100.0
Lj4g0003656 Lotus japonicus HOM05D000003 ORTHO05D000007 2.1e-18 97.4 307 25.7
Lj2g0018095 Lotus japonicus HOM05D000003 ORTHO05D034584 1.5e-16 91.3 222 27.5
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.7e-15 86.3 337 24.3
Lj6g0017573 Lotus japonicus HOM05D000003 ORTHO05D000004 4.0e-14 83.2 207 26.1
Medtr4g017870 Medicago truncatula HOM05D020876 ORTHO05D034584 2.6e-13 80.5 85 45.9
LjContig00357g0004525 Lotus japonicus HOM05D000003 ORTHO05D000022 2.2e-12 77.4 333 23.7
Prupe.6G118100 Prunus persica HOM05D000003 ORTHO05D000022 3.7e-12 76.6 334 25.7
Prupe.6G201000 Prunus persica HOM05D000003 ORTHO05D000022 3.7e-12 76.6 334 25.7
Prupe.4G161900 Prunus persica HOM05D000003 ORTHO05D000022 6.4e-12 75.9 334 25.7
FvH4_3g30492 Fragaria vesca HOM05D000003 ORTHO05D000022 1.4e-11 74.7 305 24.3
Manes.06G020101 Manihot esculenta HOM05D000003 ORTHO05D000004 4.1e-11 73.2 309 21.7
TWI38G0333 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-10 71.2 339 23.0
Manes.07G103102 Manihot esculenta HOM05D000003 ORTHO05D000004 2.7e-10 70.5 311 25.4
Medtr4g094528 Medicago truncatula HOM05D020876 ORTHO05D000004 4.6e-10 69.7 84 39.3
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-09 67.4 339 23.9
QL93p2025_0060 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-09 67.4 236 25.8
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 2.3e-09 67.4 331 23.0
Atru.chr4.29 Acer truncatum HOM05D000003 ORTHO05D000022 3.9e-09 66.6 343 21.6
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.9e-09 66.6 316 24.7
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 5.1e-09 66.2 335 21.2
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 5.1e-09 66.2 334 22.5
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 6.6e-09 65.9 266 27.4
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.1e-08 65.1 326 24.2
RcHm_v2.0_Chr2g0144631 Rosa chinensis HOM05D000003 ORTHO05D000022 1.1e-08 65.1 305 22.3
Manes.13G092620 Manihot esculenta HOM05D000003 ORTHO05D000004 3.3e-08 63.5 95 28.4
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-08 62.8 343 23.6
THA.LOC104799794 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 5.6e-08 62.8 90 32.2
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 7.3e-08 62.4 336 22.6
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 7.3e-08 62.4 293 22.2
Medtr1g107515 Medicago truncatula HOM05D020876 ORTHO05D011148 1.6e-07 61.2 66 40.9
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-07 59.7 347 23.6
Prupe.5G085900 Prunus persica HOM05D000003 ORTHO05D000022 6.2e-07 59.3 324 25.6
Atru.chr4.1146 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-06 58.5 301 23.9
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 1.4e-06 58.2 292 23.6
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.4e-06 58.2 296 24.0
CANSAT01G1021 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 57.4 94 36.2
Lj3g0015119 Lotus japonicus HOM05D000003 ORTHO05D000022 2.4e-06 57.4 183 26.2
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 3.1e-06 57.0 317 22.7
Medtr2g082490 Medicago truncatula HOM05D020876 ORTHO05D262163 5.2e-06 56.2 67 40.3
Atru.chr7.713 Acer truncatum HOM05D000003 ORTHO05D000004 8.9e-06 55.5 325 22.5
PGR031G0166 Punica granatum HOM05D000155 ORTHO05D000022 8.9e-06 55.5 333 23.7


User provided reference genes

Program Settings