Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.2e-160 569.7 281 100.0
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 2.6e-142 508.8 281 89.0
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 3.8e-141 505.0 281 89.0
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 1.7e-138 496.1 281 85.8
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 2.3e-138 495.7 281 86.1
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 8.7e-138 493.8 281 85.4
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 1.1e-137 493.4 281 85.1
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.9e-137 492.7 281 84.7
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 3.1e-135 485.3 281 84.0
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 2.9e-133 478.8 281 85.4
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 2.7e-131 472.2 279 80.3
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 6.0e-131 471.1 281 80.1
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 6.0e-131 471.1 281 80.8
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 6.7e-130 467.6 281 79.4
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 8.7e-130 467.2 281 81.5
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 1.5e-129 466.5 280 79.3
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 1.9e-129 466.1 281 80.1
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 2.5e-129 465.7 281 79.4
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 3.3e-129 465.3 281 78.6
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 5.6e-129 464.5 281 79.0
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 9.6e-129 463.8 281 79.0
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 1.3e-128 463.4 281 79.0
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 1.6e-128 463.0 282 79.4
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 6.2e-128 461.1 281 77.9
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 1.1e-127 460.3 281 78.3
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 1.1e-127 460.3 281 76.9
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 1.1e-127 460.3 281 77.9
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 1.4e-127 459.9 281 77.6
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 1.4e-127 459.9 283 78.1
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.4e-127 459.9 283 78.4
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 1.8e-127 459.5 281 78.6
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 2.4e-127 459.1 281 77.9
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 2.4e-127 459.1 283 78.4
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 3.1e-127 458.8 280 78.6
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 3.1e-127 458.8 275 79.3
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 3.1e-127 458.8 281 77.9
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 6.9e-127 457.6 286 78.0
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.9e-127 457.6 281 76.9
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 6.9e-127 457.6 282 77.7
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 9.0e-127 457.2 281 76.9
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 9.0e-127 457.2 281 77.2
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.0e-127 457.2 281 77.2
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 1.2e-126 456.8 281 76.5
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 1.2e-126 456.8 281 77.9
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 1.2e-126 456.8 281 77.2
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 2.6e-126 455.7 281 77.2
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 2.6e-126 455.7 281 76.5
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 2.6e-126 455.7 281 77.6
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 3.4e-126 455.3 281 77.9
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 4.5e-126 454.9 281 77.6
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 5.8e-126 454.5 281 76.5
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 7.6e-126 454.1 281 78.3
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 9.9e-126 453.8 281 77.2
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 1.3e-125 453.4 279 77.8
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 1.3e-125 453.4 281 77.2
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 1.3e-125 453.4 281 76.9
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.7e-125 453.0 281 76.2
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 2.2e-125 452.6 281 76.5
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 2.2e-125 452.6 281 75.1
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 2.9e-125 452.2 278 76.6
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 3.8e-125 451.8 281 76.5
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 3.8e-125 451.8 282 77.3
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 4.9e-125 451.4 282 77.3
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 4.9e-125 451.4 281 76.5
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.9e-125 451.4 287 75.3
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 4.9e-125 451.4 281 75.4
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 4.9e-125 451.4 281 76.5
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 6.4e-125 451.1 281 77.2
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 8.4e-125 450.7 282 77.3
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.4e-125 450.7 287 75.3
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.4e-125 450.7 287 75.6
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 1.1e-124 450.3 282 75.9
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 1.1e-124 450.3 277 79.8
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 2.4e-124 449.1 243 88.9
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 2.4e-124 449.1 282 77.0
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 3.2e-124 448.7 281 75.8
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 3.2e-124 448.7 283 76.3
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 3.2e-124 448.7 281 77.2
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 3.2e-124 448.7 281 76.5
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 5.5e-124 448.0 281 75.4
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 5.5e-124 448.0 281 76.9
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 5.5e-124 448.0 281 76.9
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 2.1e-123 446.0 279 77.1
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 2.1e-123 446.0 280 76.8
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 2.7e-123 445.7 281 75.1
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 3.5e-123 445.3 281 76.2
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 1.3e-122 443.4 318 70.8
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 3.9e-122 441.8 280 74.6
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 6.7e-122 441.0 298 73.2
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 6.7e-122 441.0 281 75.4
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 8.7e-122 440.7 281 73.7
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.5e-121 439.9 281 74.4
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 5.6e-121 438.0 281 75.4
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 3.7e-120 435.3 279 76.3
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 3.1e-119 432.2 281 73.7
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 6.9e-119 431.0 273 74.4
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 5.8e-118 427.9 281 71.9
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 5.8e-118 427.9 281 73.3
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 8.4e-117 424.1 243 83.5
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 1.4e-116 423.3 281 72.6
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 4.2e-116 421.8 281 72.2
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 4.2e-116 421.8 281 73.7
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 1.2e-115 420.2 281 73.3
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 1.2e-115 420.2 281 73.3
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 1.2e-115 420.2 280 69.6
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 2.1e-115 419.5 281 72.2
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 4.6e-115 418.3 287 72.8
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 4.6e-115 418.3 281 73.0
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 1.0e-114 417.2 281 70.5
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 3.0e-114 415.6 281 69.8
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 6.7e-114 414.5 281 71.9
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.3e-112 410.2 261 78.2
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 2.1e-112 409.5 249 80.7
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 8.2e-112 407.5 280 67.1
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 1.1e-111 407.1 281 70.1
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.1e-111 405.6 281 70.5
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 9.0e-111 404.1 281 71.2
RcHm_v2.0_Chr1g0356101 Rosa chinensis HOM05D003837 ORTHO05D004751 2.6e-110 402.5 281 69.4
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 1.7e-109 399.8 278 68.3
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 2.2e-109 399.4 281 68.0
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 6.5e-109 397.9 281 69.4
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 8.5e-109 397.5 281 70.8
FAN06G0309 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.1e-108 397.1 281 69.0
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 2.5e-108 396.0 247 75.7
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 7.2e-108 394.4 282 65.6
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 1.2e-107 393.7 279 66.3
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 3.0e-106 389.0 281 67.3
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 1.5e-105 386.7 282 66.0
HanXRQChr04g0121171 Helianthus annuus HOM05D003837 ORTHO05D004751 1.5e-105 386.7 281 66.2
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.9e-105 386.3 288 64.6
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 2.5e-105 386.0 283 66.4
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.4e-105 384.4 288 64.9
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.3e-104 383.6 282 66.0
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 2.2e-104 382.9 281 65.8
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 2.8e-104 382.5 283 64.3
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.8e-104 382.5 283 64.3
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 3.7e-104 382.1 237 77.6
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.7e-104 382.1 282 65.6
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.8e-104 381.7 288 64.6
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.1e-103 380.6 283 64.0
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 4.2e-100 368.6 282 63.5
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 7.2e-100 367.9 282 61.7
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 1.0e-98 364.0 282 63.1
RcHm_v2.0_Chr1g0356051 Rosa chinensis HOM05D003837 ORTHO05D004751 7.4e-97 357.8 283 62.5
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 3.7e-96 355.5 217 81.1
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 5.3e-95 351.7 261 63.2
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 9.1e-95 350.9 283 60.1
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.7e-93 346.7 223 75.3
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 2.7e-91 339.3 209 79.4
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 6.7e-90 334.7 307 55.0
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 4.1e-87 325.5 199 78.9
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.0e-85 318.5 201 74.1
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 1.3e-77 293.9 281 53.4
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 5.2e-58 228.8 201 57.2
FvH4_7g14570 Fragaria vesca HOM05D003837 ORTHO05D004751 3.4e-57 226.1 143 73.4
FAN10G2382 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.4e-55 219.9 142 72.5
Cre06.g278117 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 1.6e-54 217.2 284 41.9
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 7.8e-54 214.9 181 60.2
RcHm_v2.0_Chr1g0356441 Rosa chinensis HOM05D003837 ORTHO05D004751 6.6e-53 211.8 188 60.1
Glyma.09G258400 Glycine max HOM05D003837 ORTHO05D004751 8.6e-53 211.5 139 74.1
MCO05G263 Micromonas commoda HOM05D003837 ORTHO05D004751 8.3e-48 194.9 279 38.4
SGA_v2.0_scaffold95G28830 Striga asiatica HOM05D003837 ORTHO05D004751 8.3e-40 168.3 281 38.1
Cre13.g578900 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 1.1e-36 157.9 290 34.1
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 1.6e-35 154.1 95 72.6
FvH4_7g14571 Fragaria vesca HOM05D003837 ORTHO05D004751 2.9e-32 143.3 100 71.0
Glyma.04G165300 Glycine max HOM05D003837 ORTHO05D004751 1.1e-31 141.4 109 66.1
MD09G1245300 Malus domestica HOM05D003837 ORTHO05D004751 2.7e-30 136.7 77 79.2
MD09G1245400 Malus domestica HOM05D003837 ORTHO05D004751 2.7e-30 136.7 94 71.3
arahy.Tifrunner.gnm1.ann1.DBMD67 Arachis hypogaea HOM05D003837 ORTHO05D004751 2.2e-24 117.1 68 79.4
Ciclev10006592m.g Citrus clementina HOM05D003837 ORTHO05D033091 3.0e-21 106.7 67 64.2
RcHm_v2.0_Chr1g0356021 Rosa chinensis HOM05D003837 ORTHO05D004751 1.6e-19 100.9 108 48.1
Actinidia37295 Actinidia chinensis HOM05D003837 ORTHO05D004751 3.6e-19 99.8 69 66.7
Ciclev10013186m.g Citrus clementina HOM05D003837 ORTHO05D004751 4.9e-16 89.4 70 57.1
A06p08350 Brassica napus HOM05D003837 ORTHO05D099682 2.7e-14 83.6 65 60.0
A05p05950 Brassica napus HOM05D003837 ORTHO05D033091 1.9e-12 77.4 49 71.4
BraA05t19558Z Brassica rapa HOM05D003837 ORTHO05D033091 1.9e-12 77.4 49 71.4
AUR62043290 Chenopodium quinoa HOM05D008055 ORTHO05D009927 2.5e-12 77.0 60 58.3
BolC7t40474H Brassica oleracea HOM05D003837 ORTHO05D033622 5.6e-12 75.9 57 64.9
BolC9t54120H Brassica oleracea HOM05D003837 ORTHO05D033622 9.6e-12 75.1 57 63.2
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 1.7e-08 64.3 44 63.6
C09p56440 Brassica napus HOM05D003837 ORTHO05D101394 3.8e-08 63.2 51 58.8


User provided reference genes

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