Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.4e-248 861.7 426 100.0
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 7.3e-205 717.2 393 90.1
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 7.3e-197 690.6 393 87.0
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 4.7e-196 688.0 393 86.3
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 1.1e-184 650.2 397 79.3
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 6.0e-183 644.4 393 79.4
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 4.8e-172 608.2 397 76.8
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 1.7e-169 599.7 396 75.5
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 5.1e-166 588.2 396 73.5
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 5.1e-166 588.2 396 73.5
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 1.4e-160 570.1 418 69.1
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 1.3e-153 547.0 403 67.2
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 3.2e-152 542.3 394 66.2
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 7.2e-152 541.2 396 67.2
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 1.0e-150 537.3 400 64.5
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 3.9e-150 535.4 400 65.2
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 1.5e-149 533.5 396 67.4
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 4.4e-149 531.9 393 65.9
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 1.3e-148 530.4 396 65.2
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 1.7e-148 530.0 395 66.3
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 1.7e-148 530.0 393 65.6
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 3.7e-148 528.9 394 65.0
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 8.2e-148 527.7 394 66.0
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 1.5e-146 523.5 396 62.9
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 5.9e-146 521.5 395 64.3
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 5.9e-146 521.5 396 63.6
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 5.9e-146 521.5 390 67.7
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 1.3e-145 520.4 395 65.1
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.3e-145 520.4 395 65.3
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 1.7e-145 520.0 396 63.9
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.7e-145 520.0 395 64.6
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 3.8e-145 518.8 396 64.1
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 3.8e-145 518.8 393 64.9
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 3.8e-145 518.8 393 64.6
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 5.0e-145 518.5 396 64.4
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 5.0e-145 518.5 401 63.6
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 8.5e-145 517.7 388 66.5
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 8.5e-145 517.7 395 64.1
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 1.1e-144 517.3 397 64.5
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 1.9e-144 516.5 393 64.1
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 2.5e-144 516.2 395 63.8
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 2.5e-144 516.2 428 61.7
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 3.2e-144 515.8 394 62.7
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 8.0e-143 511.1 395 62.0
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.0e-142 510.8 393 63.4
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.4e-142 510.4 396 64.4
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 1.4e-142 510.4 397 64.0
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 1.8e-142 510.0 388 65.2
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 1.8e-142 510.0 398 64.6
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 2.3e-142 509.6 398 65.1
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 3.9e-142 508.8 398 64.1
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 5.2e-142 508.4 395 63.3
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 8.8e-142 507.7 399 62.2
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 8.8e-142 507.7 412 62.1
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 8.8e-142 507.7 396 64.1
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 1.1e-141 507.3 408 62.3
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 2.0e-141 506.5 401 64.3
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 2.6e-141 506.1 396 63.6
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 9.7e-141 504.2 400 63.2
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 2.8e-140 502.7 394 62.2
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 4.8e-140 501.9 396 63.6
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 6.3e-140 501.5 414 61.1
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 8.2e-140 501.1 397 61.7
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 1.1e-139 500.7 394 62.7
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 1.8e-139 500.0 397 63.5
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 4.1e-139 498.8 397 63.5
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 4.1e-139 498.8 396 63.6
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 5.3e-139 498.4 397 63.7
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 5.3e-139 498.4 397 63.7
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 1.2e-138 497.3 397 63.2
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 1.6e-138 496.9 396 62.6
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 1.6e-138 496.9 396 62.9
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 3.5e-138 495.7 401 62.8
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 4.5e-138 495.4 402 62.2
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 7.7e-138 494.6 397 63.0
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.2e-137 493.0 397 61.0
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 1.1e-136 490.7 407 60.4
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 4.2e-136 488.8 415 59.8
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 1.6e-135 486.9 395 63.3
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 6.1e-135 485.0 397 59.9
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 8.0e-135 484.6 398 60.8
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 1.0e-134 484.2 388 59.8
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 1.4e-134 483.8 343 68.5
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 1.4e-134 483.8 402 60.2
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 1.8e-134 483.4 391 62.4
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 4.0e-134 482.3 407 60.9
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 8.8e-134 481.1 391 62.4
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 4.4e-133 478.8 508 52.2
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.2e-132 476.5 387 62.5
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 1.2e-130 470.7 403 60.0
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 5.9e-130 468.4 363 64.2
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 2.5e-128 463.0 392 62.5
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 4.7e-127 458.8 434 55.5
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 4.7e-127 458.8 434 55.5
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 3.0e-126 456.1 395 58.0
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 8.8e-126 454.5 383 61.6
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 8.8e-126 454.5 383 61.6
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 8.8e-126 454.5 394 60.9
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 1.5e-125 453.8 363 60.6
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 2.0e-125 453.4 383 61.4
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 4.4e-125 452.2 390 59.5
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 5.7e-125 451.8 395 58.5
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.2e-124 449.9 396 57.6
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 1.6e-122 443.7 401 56.9
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 5.9e-122 441.8 387 56.6
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 8.6e-121 438.0 394 56.3
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 2.1e-119 433.3 395 55.4
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 2.8e-119 433.0 394 56.9
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 3.6e-119 432.6 394 56.3
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.6e-119 432.6 393 56.7
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 4.4e-117 425.6 389 56.3
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 2.8e-116 422.9 357 62.2
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 1.1e-115 421.0 403 54.6
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 4.1e-115 419.1 364 58.0
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 4.1e-115 419.1 332 62.0
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 3.8e-113 412.5 389 54.2
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 4.3e-112 409.1 317 62.1
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 1.4e-110 404.1 394 54.3
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 4.0e-110 402.5 336 61.9
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 5.2e-110 402.1 372 54.0
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 1.6e-106 390.6 339 62.8
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.0e-105 387.9 393 53.2
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 2.5e-104 383.3 319 60.2
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 9.5e-104 381.3 392 52.0
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 1.6e-103 380.6 392 51.8
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 2.1e-103 380.2 321 60.7
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 7.5e-101 371.7 360 52.5
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 2.2e-100 370.2 380 50.8
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 7.8e-98 361.7 391 48.6
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 7.8e-98 361.7 251 67.3
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 2.5e-96 356.7 391 48.6
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 6.2e-95 352.1 395 50.6
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 4.0e-94 349.4 391 48.1
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 7.5e-93 345.1 382 48.4
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 9.9e-93 344.7 386 47.9
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 7.8e-90 335.1 392 45.7
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 6.6e-89 332.0 270 60.4
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 1.6e-87 327.4 256 63.3
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.8e-86 322.0 262 59.9
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 1.2e-82 311.2 406 45.8
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 1.1e-80 304.7 252 59.1
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 1.9e-80 303.9 407 43.0
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 4.3e-80 302.8 271 55.7
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 8.1e-79 298.5 263 58.2
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 5.3e-78 295.8 413 41.6
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.2e-76 290.4 229 60.3
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.9e-76 290.0 257 54.9
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 1.8e-70 270.8 363 43.5
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 1.8e-65 254.2 304 47.4
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 7.4e-64 248.8 193 62.7
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 7.1e-59 232.3 437 36.6
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.3e-57 227.3 156 66.0
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 5.1e-41 172.9 362 33.4
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 3.2e-35 153.7 451 28.6
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 1.0e-33 148.7 128 63.3
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 1.5e-32 144.8 125 60.0
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 6.3e-31 139.4 99 63.6
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 3.1e-30 137.1 117 58.1
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 2.6e-29 134.0 118 57.6
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 5.9e-29 132.9 501 25.1
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 4.7e-26 123.2 222 35.6
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 1.0e-25 122.1 223 35.4
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 3.1e-22 110.5 317 30.6
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 2.6e-21 107.5 67 73.1
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 1.2e-18 98.6 138 47.1
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 3.6e-18 97.1 110 48.2
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 6.3e-15 86.3 108 46.3
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 2.7e-10 70.9 55 58.2
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 5.2e-09 66.6 132 34.1
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 2.0e-08 64.7 45 66.7
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.2e-07 61.2 72 48.6


User provided reference genes

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