Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 0.0e+00 1208.7 647 100.0
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 8.3e-269 930.2 641 81.9
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 2.0e-254 882.5 639 78.2
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 2.2e-253 879.0 667 75.1
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 9.6e-249 863.6 653 75.3
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 3.1e-247 858.6 642 77.3
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 1.5e-246 856.3 653 74.6
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 2.6e-246 855.5 653 73.7
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 4.6e-243 844.7 658 71.1
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.3e-242 843.2 660 74.1
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 7.2e-220 767.7 658 69.0
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 8.8e-218 760.8 653 65.5
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 3.2e-212 742.3 655 68.4
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 2.2e-192 676.4 695 59.6
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 8.2e-192 674.5 685 59.9
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 2.0e-190 669.8 681 57.1
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 1.5e-185 653.7 689 56.7
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 8.3e-184 647.9 677 58.1
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 1.2e-182 644.0 665 58.0
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 5.9e-182 641.7 675 58.4
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 3.8e-181 639.0 668 57.9
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.6e-179 633.6 664 58.6
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 1.7e-176 623.6 668 55.7
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 5.4e-175 618.6 668 55.4
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 9.2e-175 617.8 676 56.8
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.2e-174 617.5 652 55.4
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 5.9e-174 615.1 663 55.4
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 7.8e-174 614.8 690 55.8
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.5e-172 610.5 660 57.4
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.9e-172 610.1 674 55.5
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 2.5e-172 609.8 678 54.7
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 4.7e-171 605.5 685 55.6
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 6.1e-171 605.1 663 55.8
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 1.0e-170 604.4 682 54.4
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 6.8e-170 601.7 675 55.1
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 1.2e-169 600.9 686 52.9
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 4.4e-169 599.0 670 55.5
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 7.5e-169 598.2 679 53.5
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 2.9e-168 596.3 669 55.5
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 7.0e-167 591.7 689 53.6
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 2.7e-166 589.7 673 53.2
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 6.0e-166 588.6 671 53.8
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 4.3e-164 582.4 656 56.6
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 4.3e-164 582.4 673 54.5
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.6e-163 580.5 666 53.8
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 1.4e-162 577.4 683 52.7
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 2.0e-161 573.5 671 53.5
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 2.6e-161 573.2 718 50.8
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 5.8e-161 572.0 684 50.0
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 4.9e-160 568.9 693 54.0
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 4.1e-159 565.8 673 51.7
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.6e-158 563.9 638 56.0
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 3.5e-158 562.8 680 51.8
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 6.0e-158 562.0 688 49.4
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 6.0e-158 562.0 656 54.4
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 1.0e-157 561.2 647 52.9
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.7e-157 560.5 711 49.5
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 1.7e-157 560.5 669 52.5
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 2.3e-157 560.1 513 60.2
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 8.6e-157 558.1 680 53.2
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 1.1e-156 557.8 680 51.2
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 1.9e-156 557.0 676 51.8
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 3.3e-156 556.2 664 53.5
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 2.8e-155 553.1 682 51.2
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 4.7e-155 552.4 714 50.0
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.2e-153 547.7 681 52.6
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 1.2e-153 547.7 665 51.6
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 4.4e-153 545.8 714 51.1
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.7e-152 543.9 664 52.7
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 6.4e-152 542.0 578 56.7
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 8.3e-152 541.6 645 51.8
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 5.6e-148 528.9 584 57.4
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 9.5e-148 528.1 584 57.2
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 2.8e-147 526.6 581 56.8
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 3.4e-145 519.6 529 54.6
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 9.9e-145 518.1 658 48.0
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 2.2e-144 516.9 689 47.3
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 1.6e-139 500.7 679 49.0
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 2.1e-134 483.8 581 53.0
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 1.1e-132 478.0 686 44.2
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 2.5e-132 476.9 685 46.4
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 8.1e-131 471.9 679 44.6
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 2.9e-128 463.4 524 50.6
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 4.9e-128 462.6 686 45.9
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 9.3e-127 458.4 504 52.2
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.6e-126 457.6 632 46.2
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 5.6e-124 449.1 510 50.2
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 6.9e-122 442.2 506 49.4
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 2.0e-121 440.7 513 49.1
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 7.9e-118 428.7 519 48.0
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 2.3e-117 427.2 578 49.5
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 8.7e-117 425.2 541 50.8
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 2.5e-116 423.7 516 48.1
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 4.8e-115 419.5 501 49.7
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 4.8e-115 419.5 501 49.7
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 6.2e-115 419.1 499 48.9
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.1e-114 416.8 601 48.8
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.5e-110 403.3 596 48.0
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.5e-97 361.3 368 55.2
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.0e-93 348.6 386 51.6
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 1.3e-91 341.7 617 41.7
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.0e-89 334.3 422 46.7
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 9.4e-87 325.5 601 42.9
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 3.7e-83 313.5 523 39.8
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 5.4e-66 256.5 589 36.8
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 1.1e-63 248.8 292 51.0
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 2.9e-56 224.2 480 35.6
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 6.1e-54 216.5 225 50.2
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 2.0e-44 184.9 337 44.5
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 2.2e-43 181.4 156 66.7
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 5.8e-36 156.8 484 31.0
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 2.4e-34 151.4 566 28.8
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 1.3e-24 119.0 92 66.3
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 1.0e-16 92.8 188 50.0
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 1.4e-13 82.4 45 84.4
Medtr7g075420 Medicago truncatula HOM05D006822 ORTHO05D262608 1.7e-11 75.5 71 66.2
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 5.5e-10 70.5 105 41.0


User provided reference genes

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