Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07823_v3 Cicer arietinum L. HOM05D000060 ORTHO05D000428 6.0e-56 220.7 119 100.0
Medtr7g074990 Medicago truncatula HOM05D000060 ORTHO05D000428 2.5e-33 145.6 132 68.9
Psat3g115560 Pisum sativum HOM05D000060 ORTHO05D000428 3.7e-29 131.7 130 62.3
Glyma.18G221000 Glycine max HOM05D000060 ORTHO05D000428 9.7e-14 80.5 132 49.2
Duzib138G0275 Durio zibethinus HOM05D000060 ORTHO05D000428 1.3e-13 80.1 126 44.4
COL.COLO4_12557 Corchorus olitorius HOM05D000060 ORTHO05D000428 1.7e-13 79.7 131 42.7
Glyma.09G268700 Glycine max HOM05D000060 ORTHO05D000428 6.3e-13 77.8 132 50.0
VMungo1383G3439 Vigna mungo HOM05D000060 ORTHO05D000428 1.2e-11 73.6 130 50.0
CiPaw.01G261300 Carya illinoinensis HOM05D000060 ORTHO05D000428 1.5e-11 73.2 132 48.5
ClCG06G000340 Citrullus lanatus HOM05D000060 ORTHO05D000428 3.4e-11 72.0 129 42.6
Duzib133G0837 Durio zibethinus HOM05D000060 ORTHO05D000428 3.4e-11 72.0 126 42.1
Phvul.008G075900 Phaseolus vulgaris HOM05D000060 ORTHO05D000428 3.4e-11 72.0 128 44.5
Hund27351 Selenicereus undatus HOM05D000060 ORTHO05D000428 4.5e-11 71.6 136 41.9
TPR.G21721 Trifolium pratense HOM05D000060 ORTHO05D000428 5.9e-11 71.2 95 45.3
Actinidia12263 Actinidia chinensis HOM05D000060 ORTHO05D000428 1.0e-10 70.5 128 42.2
Nitab4.5_0007537g0010 Nicotiana tabacum HOM05D000060 ORTHO05D000428 1.7e-10 69.7 136 41.2
Ciclev10021992m.g Citrus clementina HOM05D000060 ORTHO05D000428 2.2e-10 69.3 119 42.9
Nitab4.5_0000457g0350 Nicotiana tabacum HOM05D000060 ORTHO05D000428 2.2e-10 69.3 134 41.8
Rhsim07G0027100 Rhododendron simsii HOM05D000060 ORTHO05D000428 2.2e-10 69.3 145 40.0
GSVIVG01027621001 Vitis vinifera HOM05D000060 ORTHO05D000428 2.2e-10 69.3 106 45.3
Medtr8g036085 Medicago truncatula HOM05D000060 ORTHO05D000428 6.5e-10 67.8 127 43.3
Sed0016554 Sechium edule HOM05D000060 ORTHO05D000428 6.5e-10 67.8 124 40.3
Lj3g0018337 Lotus japonicus HOM05D000060 ORTHO05D000428 8.5e-10 67.4 130 42.3
MELO3C000192.2 Cucumis melo HOM05D000060 ORTHO05D000428 1.1e-09 67.0 130 41.5
CsaV3_6G006130 Cucumis sativus L. HOM05D000060 ORTHO05D000428 1.1e-09 67.0 130 41.5
Manes.05G044500 Manihot esculenta HOM05D000060 ORTHO05D000428 1.4e-09 66.6 132 39.4
Cfa001709 Carpinus fangiana HOM05D000060 ORTHO05D000428 1.9e-09 66.2 125 43.2
Psat4g195200 Pisum sativum HOM05D000060 ORTHO05D000428 2.5e-09 65.9 122 41.8
FAN03G1190 Fragaria x ananassa HOM05D000060 ORTHO05D000428 3.2e-09 65.5 132 39.4
Glyma.03G023000 Glycine max HOM05D000060 ORTHO05D000428 4.2e-09 65.1 135 42.2
PGR042G0998 Punica granatum HOM05D000060 ORTHO05D000428 4.2e-09 65.1 134 40.3
Atru.chr5.319 Acer truncatum HOM05D000060 ORTHO05D000428 7.2e-09 64.3 93 44.1
Potri.002G149000 Populus trichocarpa HOM05D000060 ORTHO05D000428 7.2e-09 64.3 129 41.1
TWI14G0493 Tripterygium wilfordii HOM05D000060 ORTHO05D000428 7.2e-09 64.3 88 46.6
Gohir.A08G133900 Gossypium hirsutum HOM05D000060 ORTHO05D000428 9.4e-09 63.9 124 41.9
Gohir.D08G155100 Gossypium hirsutum HOM05D000060 ORTHO05D000428 9.4e-09 63.9 124 41.9
Gorai.004G161100 Gossypium raimondii HOM05D000060 ORTHO05D000428 9.4e-09 63.9 124 41.9
Manes.01G265300 Manihot esculenta HOM05D000060 ORTHO05D000428 9.4e-09 63.9 131 38.2
Sabra02G0117800 Salix brachista HOM05D000060 ORTHO05D000428 9.4e-09 63.9 128 39.1
Sabra14G0050100 Salix brachista HOM05D000060 ORTHO05D000428 1.2e-08 63.5 129 39.5
Aqoxy7G00602 Aquilegia oxysepala HOM05D000060 ORTHO05D000428 1.6e-08 63.2 89 46.1
CANSAT56G0462 Cannabis sativa HOM05D000060 ORTHO05D000428 1.6e-08 63.2 135 42.2
EL10Ac1g00905 Beta vulgaris HOM05D000060 ORTHO05D000428 2.1e-08 62.8 139 39.6
Peaxi162Scf00021g01519 Petunia axillaris HOM05D000060 ORTHO05D000428 2.1e-08 62.8 90 44.4
Haze_16824 Corylus avellana HOM05D000060 ORTHO05D000428 2.7e-08 62.4 125 41.6
TPR.G26931 Trifolium pratense HOM05D000060 ORTHO05D000428 4.7e-08 61.6 43 74.4
Dinv43719 Davidia involucrata HOM05D000060 ORTHO05D000428 6.1e-08 61.2 137 39.4
Thecc.01G375200 Theobroma cacao HOM05D000060 ORTHO05D000428 6.1e-08 61.2 132 40.2
TAR636G1803 Trochodendron aralioides HOM05D000060 ORTHO05D000428 6.1e-08 61.2 111 41.4
Hma1.2p1_1663F.1_g296330 Hydrangea macrophylla HOM05D000060 ORTHO05D000428 1.0e-07 60.5 90 42.2
Actinidia31414 Actinidia chinensis HOM05D000060 ORTHO05D000428 1.4e-07 60.1 85 43.5
Hund17014 Selenicereus undatus HOM05D000060 ORTHO05D000428 1.4e-07 60.1 137 36.5
AL4G44590 Arabidopsis lyrata HOM05D000060 ORTHO05D000428 3.0e-07 58.9 105 39.0
Os10g0162600 Oryza sativa ssp. japonica HOM05D000060 ORTHO05D000428 3.0e-07 58.9 83 48.2
ECA236G2316 Erigeron canadensis HOM05D000060 ORTHO05D000428 3.9e-07 58.5 99 41.4
Cc02_g36620 Coffea canephora HOM05D000060 ORTHO05D000428 5.1e-07 58.2 99 39.4
Glyma.01G143900 Glycine max HOM05D000060 ORTHO05D000428 5.1e-07 58.2 139 38.1
Hma1.2p1_0660F.1_g197770 Hydrangea macrophylla HOM05D000060 ORTHO05D000428 5.1e-07 58.2 89 40.4
Gohir.D12G105100 Gossypium hirsutum HOM05D000060 ORTHO05D000428 6.7e-07 57.8 120 39.2
HanXRQChr14g0452811 Helianthus annuus HOM05D000060 ORTHO05D000428 6.7e-07 57.8 102 41.2
FAN10G3335 Fragaria x ananassa HOM05D000060 ORTHO05D000428 8.8e-07 57.4 79 46.8
Gorai.008G114400 Gossypium raimondii HOM05D000060 ORTHO05D000428 8.8e-07 57.4 120 39.2
Oeu037911.2 Olea europaea HOM05D000060 ORTHO05D000428 1.1e-06 57.0 84 40.5
TWI59G1248 Tripterygium wilfordii HOM05D000060 ORTHO05D000428 1.1e-06 57.0 102 38.2
arahy.Tifrunner.gnm1.ann1.4ZP6RH Arachis hypogaea HOM05D000060 ORTHO05D000428 1.5e-06 56.6 108 38.9
TAR629G1694 Trochodendron aralioides HOM05D000060 ORTHO05D000428 2.6e-06 55.8 81 44.4
CARHR140610 Cardamine hirsuta HOM05D000060 ORTHO05D000428 3.3e-06 55.5 100 39.0
Solyc01g091420.2 Solanum lycopersicum HOM05D000060 ORTHO05D000428 3.3e-06 55.5 138 35.5
Eucgr.E01414 Eucalyptus grandis HOM05D000060 ORTHO05D000428 4.4e-06 55.1 87 42.5
Sp4g27450 Schrenkiella parvula HOM05D000060 ORTHO05D000428 4.4e-06 55.1 88 42.0
DCAR_008562 Daucus carota HOM05D000060 ORTHO05D000428 5.7e-06 54.7 81 42.0
Gohir.A12G101966 Gossypium hirsutum HOM05D000060 ORTHO05D000428 5.7e-06 54.7 120 38.3
Lj9A571T73 Lonicera japonica HOM05D000060 ORTHO05D000428 7.4e-06 54.3 103 38.8
HPP92_014967 Vanilla planifolia HOM05D000060 ORTHO05D000428 7.4e-06 54.3 90 44.4
CAN.G388.4 Capsicum annuum HOM05D000060 ORTHO05D000428 9.7e-06 53.9 83 42.2
MD02G1202500 Malus domestica HOM05D000060 ORTHO05D000428 9.7e-06 53.9 83 41.0
Nn1g01208 Nelumbo nucifera HOM05D000060 ORTHO05D000428 9.7e-06 53.9 94 37.2


User provided reference genes

Program Settings