Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 2.8e-48 194.9 95 100.0
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 8.5e-45 183.3 94 91.5
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 9.4e-36 153.3 95 77.9
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 2.1e-35 152.1 95 77.9
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 2.7e-35 151.8 94 76.6
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 3.6e-35 151.4 95 77.9
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 3.6e-35 151.4 95 77.9
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 3.6e-35 151.4 95 76.8
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 1.0e-34 149.8 95 76.8
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 2.3e-34 148.7 95 74.7
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 2.3e-34 148.7 95 75.8
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 2.3e-34 148.7 95 71.6
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 5.2e-34 147.5 95 76.8
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 6.7e-34 147.1 95 76.8
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 8.8e-34 146.7 95 70.5
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 8.8e-34 146.7 95 74.7
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 8.8e-34 146.7 93 73.1
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 1.5e-33 146.0 95 70.5
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 1.5e-33 146.0 95 72.6
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 1.5e-33 146.0 95 70.5
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 2.0e-33 145.6 95 69.5
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 3.3e-33 144.8 95 70.5
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 3.3e-33 144.8 95 70.5
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 4.4e-33 144.4 95 68.4
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 7.4e-33 143.7 95 70.5
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 7.4e-33 143.7 93 74.2
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 9.7e-33 143.3 95 69.5
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 9.7e-33 143.3 95 69.5
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 1.3e-32 142.9 95 70.5
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 1.3e-32 142.9 95 68.4
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 1.3e-32 142.9 95 70.5
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 1.7e-32 142.5 95 69.5
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 1.7e-32 142.5 95 73.7
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 1.7e-32 142.5 94 73.4
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 1.7e-32 142.5 93 74.2
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 2.2e-32 142.1 93 69.9
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 2.2e-32 142.1 95 70.5
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.2e-32 142.1 95 70.5
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 2.2e-32 142.1 95 68.4
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 2.2e-32 142.1 95 68.4
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 2.8e-32 141.7 95 70.5
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 3.7e-32 141.4 95 70.5
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 4.8e-32 141.0 95 70.5
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 6.3e-32 140.6 95 68.4
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 6.3e-32 140.6 93 68.8
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 8.2e-32 140.2 95 74.7
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 8.2e-32 140.2 95 74.7
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 8.2e-32 140.2 95 68.4
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 8.2e-32 140.2 95 68.4
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 8.2e-32 140.2 95 69.5
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 8.2e-32 140.2 95 71.6
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 1.1e-31 139.8 95 70.5
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 1.1e-31 139.8 95 68.4
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 1.1e-31 139.8 95 69.5
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 1.1e-31 139.8 95 71.6
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 1.1e-31 139.8 95 68.4
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 1.4e-31 139.4 95 67.4
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 1.8e-31 139.0 95 69.5
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 1.8e-31 139.0 95 65.3
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.4e-31 138.7 96 68.8
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 3.1e-31 138.3 95 67.4
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 3.1e-31 138.3 95 65.3
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 4.1e-31 137.9 95 67.4
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 4.1e-31 137.9 93 68.8
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 4.1e-31 137.9 91 70.3
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 7.0e-31 137.1 95 64.2
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 1.2e-30 136.3 95 63.2
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 1.2e-30 136.3 95 63.2
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 1.2e-30 136.3 95 68.4
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 1.2e-30 136.3 92 71.7
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 1.6e-30 136.0 95 67.4
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 1.6e-30 136.0 95 67.4
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 3.5e-30 134.8 101 61.4
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 3.5e-30 134.8 95 67.4
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 4.5e-30 134.4 95 67.4
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 5.9e-30 134.0 93 65.6
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 7.7e-30 133.7 95 64.2
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 2.2e-29 132.1 95 67.4
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 2.2e-29 132.1 95 67.4
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 2.2e-29 132.1 95 67.4
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 2.9e-29 131.7 95 67.4
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 2.9e-29 131.7 95 67.4
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 2.9e-29 131.7 95 66.3
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 2.9e-29 131.7 95 67.4
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 5.0e-29 131.0 95 67.4
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 5.0e-29 131.0 95 66.3
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 5.0e-29 131.0 95 66.3
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 6.5e-29 130.6 95 66.3
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 6.5e-29 130.6 95 66.3
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 6.5e-29 130.6 95 63.2
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 6.5e-29 130.6 95 67.4
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 1.9e-28 129.0 95 62.1
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 2.5e-28 128.6 95 61.1
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 3.2e-28 128.3 90 64.4
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 5.5e-28 127.5 95 60.0
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 7.2e-28 127.1 90 65.6
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 4.7e-27 124.4 95 63.2
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 1.0e-26 123.2 90 65.6
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 6.7e-26 120.6 83 68.7
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 8.8e-26 120.2 90 61.1
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 2.0e-25 119.0 77 72.7
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 3.3e-25 118.2 77 72.7
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 4.4e-25 117.9 77 70.1
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 5.7e-25 117.5 78 69.2
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 1.3e-24 116.3 80 68.8
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 1.7e-24 115.9 90 63.3
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 4.8e-24 114.4 77 64.9
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 9.1e-23 110.2 90 55.6
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 4.5e-22 107.8 77 66.2
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 2.9e-21 105.1 81 64.2
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 9.4e-20 100.1 54 85.2
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 1.2e-19 99.8 66 65.2
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 2.3e-18 95.5 66 62.1
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 2.3e-18 95.5 83 59.0
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 1.3e-16 89.7 54 74.1
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 2.2e-16 89.0 50 78.0
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 1.4e-15 86.3 56 71.4
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 3.8e-13 78.2 96 45.8
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 4.7e-11 71.2 49 65.3
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 6.1e-11 70.9 38 84.2
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 6.8e-10 67.4 44 61.4
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 8.8e-10 67.0 35 91.4
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 9.8e-09 63.5 37 73.0


User provided reference genes

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