Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 7.6e-127 458.0 404 100.0
Medtr7g073260 Medicago truncatula HOM05D007752 ORTHO05D009994 2.8e-57 226.9 389 73.5
Lj1g0026088 Lotus japonicus HOM05D007752 ORTHO05D009994 1.1e-48 198.4 397 64.0
TPR.G14113 Trifolium pratense HOM05D007752 ORTHO05D009994 3.3e-45 186.8 389 65.0
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 1.6e-28 131.3 319 59.9
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 3.1e-27 127.1 390 61.0
Lj3P941T40 Lonicera japonica HOM05D007752 ORTHO05D009994 1.1e-24 118.6 163 38.0
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 1.9e-24 117.9 162 50.6
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 2.4e-24 117.5 162 36.4
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 9.2e-24 115.5 162 35.8
CANSAT35G0798 Cannabis sativa HOM05D007752 ORTHO05D009994 6.6e-22 109.4 392 58.9
TWI77G0759 Tripterygium wilfordii HOM05D007752 ORTHO05D009994 8.6e-22 109.0 153 40.5
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 1.1e-21 108.6 162 37.7
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 1.6e-20 104.8 162 35.8
ClCG10G022730 Citrullus lanatus HOM05D007752 ORTHO05D009994 3.6e-20 103.6 162 45.7
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 1.1e-19 102.1 162 35.2
VMungo0251G1651 Vigna mungo HOM05D007752 ORTHO05D009994 1.4e-19 101.7 380 25.3
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 8.9e-19 99.0 162 45.1
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 8.9e-19 99.0 157 47.1
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 5.8e-18 96.3 149 38.3
Psat3g118880 Pisum sativum HOM05D007752 ORTHO05D009994 1.7e-17 94.7 59 74.6
Rhsim04G0121800 Rhododendron simsii HOM05D007752 ORTHO05D009994 1.4e-16 91.7 391 57.0
SalBow8G2716 Salvia bowleyana HOM05D007752 ORTHO05D009994 1.4e-16 91.7 175 32.0
Cfa017034 Carpinus fangiana HOM05D007752 ORTHO05D009994 1.9e-16 91.3 139 41.0
PGR031G1793 Punica granatum HOM05D007752 ORTHO05D009994 1.9e-16 91.3 159 34.6
Haze_21175 Corylus avellana HOM05D007752 ORTHO05D009994 9.2e-16 89.0 140 34.3
Gorai.005G004200 Gossypium raimondii HOM05D007752 ORTHO05D009994 1.2e-15 88.6 151 41.7
Sed0005875 Sechium edule HOM05D007752 ORTHO05D009994 1.2e-15 88.6 151 31.8
Phvul.008G082800 Phaseolus vulgaris HOM05D007752 ORTHO05D009994 3.5e-15 87.0 390 57.4
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 7.8e-15 85.9 142 34.5
MD04G1174700 Malus domestica HOM05D007752 ORTHO05D009994 1.3e-14 85.1 155 44.5
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 1.7e-14 84.7 84 46.4
HanXRQChr01g0000111 Helianthus annuus HOM05D007752 ORTHO05D009994 3.9e-14 83.6 141 34.8
Thecc.04G151600 Theobroma cacao HOM05D007752 ORTHO05D009994 5.1e-14 83.2 91 49.5
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 6.6e-14 82.8 155 27.1
Lsat_1_v5_gn_5_152320 Lactuca sativa HOM05D007752 ORTHO05D009994 8.7e-14 82.4 141 31.9
Prupe.6G293600 Prunus persica HOM05D007752 ORTHO05D009994 1.5e-13 81.6 140 44.3
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 1.5e-13 81.6 87 47.1
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 1.5e-13 81.6 145 31.0
Solyc09g042250.2 Solanum lycopersicum HOM05D007752 ORTHO05D009994 1.9e-13 81.3 142 43.0
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 5.6e-13 79.7 84 44.0
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 5.6e-13 79.7 125 33.6
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 7.3e-13 79.3 157 40.1
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 1.2e-12 78.6 85 45.9
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.1e-12 77.8 84 46.4
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 4.7e-12 76.6 157 33.1
VMungo0720G0765 Vigna mungo HOM05D007752 ORTHO05D009994 6.2e-12 76.3 56 60.7
THA.LOC104807022 Tarenaya hassleriana HOM05D007752 ORTHO05D009994 8.1e-12 75.9 157 29.3
Ciclev10013314m.g Citrus clementina HOM05D007752 ORTHO05D009994 1.1e-11 75.5 142 31.0
Gohir.A02G003300 Gossypium hirsutum HOM05D007752 ORTHO05D009994 1.4e-11 75.1 88 39.8
SGA_v2.0_scaffold85G26614 Striga asiatica HOM05D007752 ORTHO05D009994 1.8e-11 74.7 134 33.6
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 2.4e-11 74.3 139 32.4
Peaxi162Scf00141g00093 Petunia axillaris HOM05D007752 ORTHO05D009994 5.3e-11 73.2 78 47.4
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 9.0e-11 72.4 83 44.6
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 2.0e-10 71.2 333 60.7
Hma1.2p1_0174F.1_g076820 Hydrangea macrophylla HOM05D007752 ORTHO05D009994 2.0e-10 71.2 139 43.2
Migut.J00038 Erythranthe guttata HOM05D007752 ORTHO05D009994 3.4e-10 70.5 136 31.6
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 2.9e-09 67.4 83 41.0
Nitab4.5_0004433g0030 Nicotiana tabacum HOM05D007752 ORTHO05D009994 3.8e-09 67.0 71 45.1
Sopen09g015390 Solanum pennellii HOM05D007752 ORTHO05D009994 3.8e-09 67.0 142 40.1
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 2.4e-08 64.3 72 44.4
Manes.08G171200 Manihot esculenta HOM05D007752 ORTHO05D009994 4.2e-08 63.5 51 58.8
CDE04G1037 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 7.1e-08 62.8 80 36.2
SalBow1G2062 Salvia bowleyana HOM05D007752 ORTHO05D009994 9.3e-08 62.4 142 26.1
SalBow1G4712 Salvia bowleyana HOM05D007752 ORTHO05D009994 9.3e-08 62.4 142 26.1
PGSC0003DMG400038126 Solanum tuberosum HOM05D007752 ORTHO05D009994 9.3e-08 62.4 71 43.7
FAN02G1651 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.1e-07 61.2 58 46.6
ECA248G3142 Erigeron canadensis HOM05D007752 ORTHO05D009994 2.7e-07 60.8 142 26.8
Gohir.D02G003700 Gossypium hirsutum HOM05D007752 ORTHO05D009994 6.6e-06 56.2 72 34.7


User provided reference genes

Program Settings