Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 1.8e-87 325.9 160 100.0
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 8.3e-69 263.8 145 89.7
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 6.6e-66 254.2 144 86.1
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 1.1e-65 253.4 147 85.0
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 7.5e-62 240.7 146 79.5
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 1.1e-60 236.9 142 81.7
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 1.3e-58 229.9 131 82.4
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 6.6e-58 227.6 142 78.9
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 3.3e-57 225.3 128 80.5
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 5.6e-57 224.6 127 78.7
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 5.6e-57 224.6 143 77.6
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 9.5e-57 223.8 131 80.9
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 1.2e-56 223.4 131 80.2
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 1.6e-56 223.0 131 79.4
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 2.8e-56 222.2 129 79.8
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 2.8e-56 222.2 126 78.6
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 3.6e-56 221.9 137 73.7
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 8.1e-56 220.7 126 79.4
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 8.1e-56 220.7 127 76.4
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 1.1e-55 220.3 126 80.2
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 1.1e-55 220.3 143 70.6
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 1.4e-55 219.9 127 80.3
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 1.4e-55 219.9 128 80.5
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 2.3e-55 219.2 137 72.3
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 5.2e-55 218.0 128 75.8
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 6.8e-55 217.6 121 81.8
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 1.2e-54 216.9 120 81.7
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 1.2e-54 216.9 137 76.6
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.5e-54 216.5 127 77.2
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 2.0e-54 216.1 128 78.9
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 2.0e-54 216.1 127 76.4
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 2.0e-54 216.1 125 79.2
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 2.6e-54 215.7 128 78.9
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 2.6e-54 215.7 127 77.2
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 3.4e-54 215.3 128 78.9
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 3.4e-54 215.3 127 77.2
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 3.4e-54 215.3 128 74.2
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 5.8e-54 214.5 128 76.6
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 7.5e-54 214.2 132 75.0
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 1.3e-53 213.4 114 80.7
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 1.7e-53 213.0 135 75.6
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 2.2e-53 212.6 132 74.2
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 2.2e-53 212.6 132 74.2
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 2.2e-53 212.6 139 69.1
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 4.9e-53 211.5 128 74.2
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 4.9e-53 211.5 130 76.2
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 6.4e-53 211.1 132 73.5
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 1.1e-52 210.3 130 69.2
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 1.4e-52 209.9 118 78.0
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 1.4e-52 209.9 130 71.5
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 1.9e-52 209.5 127 74.0
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.9e-52 209.5 127 76.4
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 2.4e-52 209.1 127 74.8
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 2.4e-52 209.1 150 66.7
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 3.2e-52 208.8 130 72.3
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 3.2e-52 208.8 126 73.0
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 4.1e-52 208.4 126 75.4
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 5.4e-52 208.0 132 72.7
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 9.2e-52 207.2 127 74.8
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 1.2e-51 206.8 140 70.0
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 6.0e-51 204.5 140 68.6
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 6.0e-51 204.5 140 69.3
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 1.3e-50 203.4 128 74.2
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 5.1e-50 201.4 127 71.7
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 5.1e-50 201.4 140 68.6
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 1.1e-49 200.3 132 70.5
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 1.5e-49 199.9 140 67.9
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 1.5e-49 199.9 127 73.2
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 2.5e-49 199.1 126 70.6
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 4.3e-49 198.4 120 70.8
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.2e-48 196.8 148 65.5
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 1.2e-48 196.8 118 72.9
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.8e-48 195.7 137 68.6
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 4.7e-48 194.9 137 68.6
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 6.2e-48 194.5 137 67.2
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 6.2e-48 194.5 120 75.0
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 6.2e-48 194.5 120 75.0
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 1.1e-47 193.7 120 74.2
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 1.1e-47 193.7 123 71.5
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 1.1e-47 193.7 146 62.3
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.8e-47 193.0 123 71.5
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 1.8e-47 193.0 123 73.2
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 2.4e-47 192.6 123 71.5
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 5.2e-47 191.4 120 72.5
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 5.2e-47 191.4 118 74.6
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 6.8e-47 191.0 120 73.3
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 6.8e-47 191.0 120 73.3
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 2.0e-46 189.5 120 72.5
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 1.4e-44 183.3 123 71.5
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 3.5e-43 178.7 104 77.9
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 3.1e-39 165.6 93 77.4
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 9.0e-39 164.1 126 62.7
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 2.0e-38 162.9 93 75.3
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 2.2e-37 159.5 127 54.3
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 2.9e-37 159.1 123 57.7
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 5.4e-36 154.8 89 76.4
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 4.3e-33 145.2 115 54.8
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 7.3e-33 144.4 129 52.7
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 5.8e-30 134.8 94 59.6
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 1.3e-29 133.7 85 71.8
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 3.8e-29 132.1 77 75.3
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 1.0e-26 124.0 72 75.0
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 3.7e-24 115.5 86 65.1
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 1.1e-23 114.0 131 43.5
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 2.6e-22 109.4 72 65.3
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 1.7e-21 106.7 125 35.2
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 4.9e-21 105.1 124 43.5
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 2.3e-18 96.3 51 80.4
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 3.9e-18 95.5 55 72.7
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.5e-17 93.6 64 68.8
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 4.8e-16 88.6 119 38.7
CBR_g50885 Chara braunii HOM05D006727 ORTHO05D008408 5.8e-14 81.6 122 34.4
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 5.1e-10 68.6 58 58.6
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 1.5e-09 67.0 54 59.3
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 1.3e-08 63.9 58 53.4


User provided reference genes

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