Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07754_v3 Cicer arietinum L. HOM05D006353 ORTHO05D007993 2.7e-146 521.9 255 100.0
Ca_29600_v3 Cicer arietinum L. HOM05D006353 ORTHO05D007993 2.7e-146 521.9 255 100.0
Medtr7g072635 Medicago truncatula HOM05D006353 ORTHO05D007993 3.2e-91 339.0 256 69.9
Medtr7g072870 Medicago truncatula HOM05D006353 ORTHO05D007993 3.2e-91 339.0 256 69.9
Lj1g0007888 Lotus japonicus HOM05D006353 ORTHO05D007993 2.5e-83 312.8 259 65.3
Psat3g120040 Pisum sativum HOM05D006353 ORTHO05D007993 2.7e-82 309.3 253 66.8
Glyma.18G215200 Glycine max HOM05D006353 ORTHO05D007993 2.8e-79 299.3 259 62.9
arahy.Tifrunner.gnm1.ann1.FA4IPG Arachis hypogaea HOM05D006353 ORTHO05D007993 8.0e-74 281.2 258 60.9
arahy.Tifrunner.gnm1.ann1.0YL58U Arachis hypogaea HOM05D006353 ORTHO05D007993 2.3e-73 279.6 258 60.5
Lalb_Chr19g0124031 Lupinus albus HOM05D006353 ORTHO05D007993 3.0e-73 279.3 262 58.4
VMungo1383G2355 Vigna mungo HOM05D006353 ORTHO05D007993 3.7e-71 272.3 254 58.3
Phvul.008G084100 Phaseolus vulgaris HOM05D006353 ORTHO05D007993 8.3e-71 271.2 254 59.1
Haze_21157 Corylus avellana HOM05D006353 ORTHO05D007993 1.5e-27 127.5 248 35.1
Potri.016G134500 Populus trichocarpa HOM05D006353 ORTHO05D007993 5.6e-27 125.6 272 37.1
CiPaw.09G219300 Carya illinoinensis HOM05D006353 ORTHO05D007993 3.6e-26 122.9 261 35.2
Cfa017056 Carpinus fangiana HOM05D006353 ORTHO05D007993 1.1e-25 121.3 252 35.7
C04p09030 Brassica napus HOM05D006353 ORTHO05D007993 2.6e-24 116.7 253 34.8
BolC4t22493H Brassica oleracea HOM05D006353 ORTHO05D007993 2.6e-24 116.7 253 34.8
Prupe.6G291400 Prunus persica HOM05D006353 ORTHO05D007993 3.4e-24 116.3 197 39.6
Dinv11379 Davidia involucrata HOM05D006353 ORTHO05D007993 5.8e-24 115.5 203 38.4
QL07p032560 Quercus lobata HOM05D006353 ORTHO05D007993 7.6e-24 115.2 249 36.9
A05p07550 Brassica napus HOM05D006353 ORTHO05D007993 9.9e-24 114.8 254 34.3
BraA05t19722Z Brassica rapa HOM05D006353 ORTHO05D007993 9.9e-24 114.8 254 34.3
BcaB02g09176 Brassica carinata HOM05D006353 ORTHO05D007993 1.7e-23 114.0 260 34.6
Sabra04G0151900 Salix brachista HOM05D006353 ORTHO05D007993 1.7e-23 114.0 253 34.8
BcaC02g12001 Brassica carinata HOM05D006353 ORTHO05D007993 2.9e-23 113.2 253 34.0
Manes.09G116500 Manihot esculenta HOM05D006353 ORTHO05D007993 4.9e-23 112.5 212 38.2
TPR.G26913 Trifolium pratense HOM05D006353 ORTHO05D007993 1.1e-22 111.3 108 58.3
Atru.chr8.2382 Acer truncatum HOM05D006353 ORTHO05D007993 1.4e-22 110.9 270 34.1
Ciclev10012094m.g Citrus clementina HOM05D006353 ORTHO05D007993 1.9e-22 110.5 277 33.6
TWI74G0177 Tripterygium wilfordii HOM05D006353 ORTHO05D007993 2.4e-22 110.2 204 36.8
FvH4_6g10130 Fragaria vesca HOM05D006353 ORTHO05D007993 2.7e-21 106.7 260 33.5
FAN14G4939 Fragaria x ananassa HOM05D006353 ORTHO05D007993 2.7e-21 106.7 260 33.5
Thecc.04G154100 Theobroma cacao HOM05D006353 ORTHO05D007993 3.5e-21 106.3 280 33.6
Dinv25324 Davidia involucrata HOM05D006353 ORTHO05D007993 6.0e-21 105.5 254 31.1
Eucgr.K01277 Eucalyptus grandis HOM05D006353 ORTHO05D007993 1.0e-20 104.8 209 35.9
FAN05G4939 Fragaria x ananassa HOM05D006353 ORTHO05D007993 2.3e-20 103.6 260 33.1
MD12G1185800 Malus domestica HOM05D006353 ORTHO05D007993 2.3e-20 103.6 198 38.9
RcHm_v2.0_Chr3g0460831 Rosa chinensis HOM05D006353 ORTHO05D007993 3.0e-20 103.2 264 33.0
Actinidia11518 Actinidia chinensis HOM05D006353 ORTHO05D007993 3.9e-20 102.8 268 35.1
TAR636G2144 Trochodendron aralioides HOM05D006353 ORTHO05D007993 3.9e-20 102.8 267 34.8
BcaB01g03677 Brassica carinata HOM05D006353 ORTHO05D007993 1.5e-19 100.9 262 32.1
THA.LOC104806639 Tarenaya hassleriana HOM05D006353 ORTHO05D007993 3.3e-19 99.8 221 32.1
BcaC01g05532 Brassica carinata HOM05D006353 ORTHO05D007993 7.4e-19 98.6 263 31.9
C03p25230 Brassica napus HOM05D006353 ORTHO05D007993 7.4e-19 98.6 263 31.9
BolC3t14918H Brassica oleracea HOM05D006353 ORTHO05D007993 7.4e-19 98.6 263 31.9
BraA03t11371Z Brassica rapa HOM05D006353 ORTHO05D007993 9.6e-19 98.2 263 31.6
Carub.0004s2049 Capsella rubella HOM05D006353 ORTHO05D007993 9.6e-19 98.2 263 32.3
FAN09G0411 Fragaria x ananassa HOM05D006353 ORTHO05D007993 1.3e-18 97.8 269 33.1
AT2G38500 Arabidopsis thaliana HOM05D006353 ORTHO05D007993 1.6e-18 97.4 263 32.3
Actinidia29043 Actinidia chinensis HOM05D006353 ORTHO05D007993 2.1e-18 97.1 108 53.7
AL4G35790 Arabidopsis lyrata HOM05D006353 ORTHO05D007993 2.1e-18 97.1 235 33.2
MSTRG.18951 Avicennia marina HOM05D006353 ORTHO05D007993 2.1e-18 97.1 205 36.6
BcaB01g03678 Brassica carinata HOM05D006353 ORTHO05D007993 2.1e-18 97.1 264 31.4
A03p21360 Brassica napus HOM05D006353 ORTHO05D007993 2.1e-18 97.1 263 31.6
Sp4g20840 Schrenkiella parvula HOM05D006353 ORTHO05D007993 2.1e-18 97.1 263 32.3
vmacro20360 Vaccinium macrocarpon HOM05D006353 ORTHO05D007993 2.1e-18 97.1 256 32.4
Thhalv10016859m.g Eutrema salsugineum HOM05D006353 ORTHO05D007993 3.7e-18 96.3 263 31.6
Aa31LG5G23800 Aethionema arabicum HOM05D006353 ORTHO05D007993 4.8e-18 95.9 236 33.5
Rhsim05G0229500 Rhododendron simsii HOM05D006353 ORTHO05D007993 6.2e-18 95.5 252 33.3
CARHR133200 Cardamine hirsuta HOM05D006353 ORTHO05D007993 4.0e-17 92.8 237 32.9
Manes.08G173800 Manihot esculenta HOM05D006353 ORTHO05D007993 4.0e-17 92.8 261 33.0
Duzib151G0311 Durio zibethinus HOM05D006353 ORTHO05D007993 1.5e-16 90.9 281 29.9
ClCG04G006410 Citrullus lanatus HOM05D006353 ORTHO05D007993 2.6e-16 90.1 229 31.4
GSVIVG01030203001 Vitis vinifera HOM05D006353 ORTHO05D007993 3.4e-16 89.7 200 35.0
CiPaw.09G219500 Carya illinoinensis HOM05D006353 ORTHO05D007993 1.3e-15 87.8 118 48.3
BcaB02g09177 Brassica carinata HOM05D006353 ORTHO05D007993 1.7e-15 87.4 109 48.6
MELO3C025210.2 Cucumis melo HOM05D006353 ORTHO05D007993 3.8e-15 86.3 210 30.5
Duzib212G0771 Durio zibethinus HOM05D006353 ORTHO05D007993 3.8e-15 86.3 233 33.5
CSS0001064 Camellia sinensis var. sinensis HOM05D006353 ORTHO05D007993 4.9e-15 85.9 248 31.5
CSS0032329 Camellia sinensis var. sinensis HOM05D006353 ORTHO05D007993 4.9e-15 85.9 248 31.5
FAN05G5674 Fragaria x ananassa HOM05D006353 ORTHO05D007993 1.4e-14 84.3 240 33.3
Sed0002935 Sechium edule HOM05D006353 ORTHO05D007993 2.5e-14 83.6 126 41.3
AUR62006369 Chenopodium quinoa HOM05D006353 ORTHO05D007993 4.2e-14 82.8 259 30.9
Migut.J00057 Erythranthe guttata HOM05D006353 ORTHO05D007993 5.5e-14 82.4 205 31.7
Gohir.D10G117100 Gossypium hirsutum HOM05D006353 ORTHO05D007993 1.2e-13 81.3 233 30.0
Gorai.011G129000 Gossypium raimondii HOM05D006353 ORTHO05D007993 1.2e-13 81.3 233 30.0
Gohir.A10G149700 Gossypium hirsutum HOM05D006353 ORTHO05D007993 1.6e-13 80.9 232 30.2
Hund19788 Selenicereus undatus HOM05D006353 ORTHO05D007993 1.6e-13 80.9 260 31.2
Ah.08g209640 Amaranthus hybridus HOM05D006353 ORTHO05D007993 3.5e-13 79.7 259 30.1
EL10Ac7g17070 Beta vulgaris HOM05D006353 ORTHO05D007993 3.5e-13 79.7 198 34.3
AUR62029702 Chenopodium quinoa HOM05D006353 ORTHO05D007993 4.6e-13 79.3 259 30.1
Oeu026960.1 Olea europaea HOM05D006353 ORTHO05D007993 3.0e-12 76.6 212 31.1
COL.COLO4_16552 Corchorus olitorius HOM05D006353 ORTHO05D007993 3.9e-12 76.3 127 44.9
PGR004G2035 Punica granatum HOM05D006353 ORTHO05D007993 3.9e-12 76.3 209 30.1
Nn2g10337 Nelumbo nucifera HOM05D006353 ORTHO05D007993 1.5e-11 74.3 266 30.1
HanXRQChr14g0433401 Helianthus annuus HOM05D006353 ORTHO05D007993 2.5e-11 73.6 197 29.9
CsaV3_4G027090 Cucumis sativus L. HOM05D006353 ORTHO05D007993 4.3e-11 72.8 189 31.2
Peaxi162Scf00732g00043 Petunia axillaris HOM05D006353 ORTHO05D007993 5.7e-11 72.4 115 39.1
PGSC0003DMG400004416 Solanum tuberosum HOM05D006353 ORTHO05D007993 5.7e-11 72.4 206 27.7
Nitab4.5_0003003g0010 Nicotiana tabacum HOM05D006353 ORTHO05D007993 1.6e-10 70.9 98 43.9
Sc07g0005810 Simmondsia chinensis HOM05D006353 ORTHO05D007993 1.6e-10 70.9 256 29.7
Sopen09g010850 Solanum pennellii HOM05D006353 ORTHO05D007993 2.1e-10 70.5 100 39.0
CANSAT35G0573 Cannabis sativa HOM05D006353 ORTHO05D007993 8.2e-10 68.6 186 31.2
Nitab4.5_0001469g0020 Nicotiana tabacum HOM05D006353 ORTHO05D007993 1.8e-09 67.4 94 44.7
SGA_v2.0_scaffold85G26642 Striga asiatica HOM05D006353 ORTHO05D007993 1.8e-09 67.4 96 45.8
PSO384G2070 Papaver somniferum HOM05D006353 ORTHO05D007993 9.0e-09 65.1 234 28.6
PSO339G6092 Papaver somniferum HOM05D006353 ORTHO05D007993 5.8e-08 62.4 234 26.9
ATR0681G315 Amborella trichopoda HOM05D006353 ORTHO05D007993 7.6e-08 62.0 101 38.6
SalBow5G5035 Salvia bowleyana HOM05D006353 ORTHO05D007993 7.6e-08 62.0 209 28.2
SalBow5G5483 Salvia bowleyana HOM05D006353 ORTHO05D007993 7.6e-08 62.0 209 28.2
Lsat_1_v5_gn_5_150140 Lactuca sativa HOM05D006353 ORTHO05D007993 1.3e-07 61.2 185 29.2
Sc20g0006870 Simmondsia chinensis HOM05D006353 ORTHO05D007993 1.3e-07 61.2 173 32.9
Hma1.2p1_1052F.1_g252320 Hydrangea macrophylla HOM05D006353 ORTHO05D007993 3.8e-07 59.7 124 36.3
MBI04_g30107_MAGBIO Magnolia biondii HOM05D006831 ORTHO05D008256 1.9e-06 57.4 104 42.3
ECA248G0672 Erigeron canadensis HOM05D006353 ORTHO05D007993 2.5e-06 57.0 196 28.1
ATR0705G209 Amborella trichopoda HOM05D006831 ORTHO05D008256 3.2e-06 56.6 120 38.3


User provided reference genes

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