Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 0.0e+00 1528.1 828 100.0
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 0.0e+00 1289.2 833 84.6
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 0.0e+00 1245.0 834 83.1
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 0.0e+00 1209.9 846 79.0
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 0.0e+00 1183.3 847 78.4
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 0.0e+00 1174.8 849 75.6
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 0.0e+00 1162.1 864 75.5
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 0.0e+00 1160.2 864 75.3
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 0.0e+00 1151.0 847 76.0
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 0.0e+00 1147.9 849 74.2
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 0.0e+00 1142.1 847 74.7
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 0.0e+00 1132.5 845 74.3
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 0.0e+00 1130.2 846 74.2
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 0.0e+00 1128.6 847 74.9
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 0.0e+00 1116.3 847 73.7
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 0.0e+00 1107.4 848 71.6
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 0.0e+00 1096.3 846 73.2
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 0.0e+00 1095.9 846 73.2
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 0.0e+00 1094.7 853 72.0
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 8.4e-306 1053.5 852 71.4
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 1.9e-294 1015.8 827 73.6
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 8.1e-293 1010.4 691 82.8
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 1.0e-287 993.4 862 66.6
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 1.7e-282 976.1 857 64.3
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 3.2e-281 971.8 861 64.3
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 1.9e-278 962.6 852 66.5
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.6e-277 959.5 858 64.8
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 1.1e-276 956.8 862 64.5
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 6.9e-276 954.1 862 66.1
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 1.5e-275 953.0 862 64.3
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 5.8e-275 951.0 859 64.6
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.0e-274 950.3 859 62.3
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 8.4e-274 947.2 859 61.8
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 4.2e-273 944.9 862 63.7
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 4.2e-273 944.9 862 63.1
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 5.1e-271 937.9 856 63.9
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 2.2e-269 932.6 861 64.7
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 3.7e-269 931.8 849 64.4
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 6.3e-269 931.0 859 63.8
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.8e-268 929.5 859 63.8
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 1.7e-266 922.9 853 64.5
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 1.4e-265 919.8 862 61.8
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 1.0e-263 913.7 860 62.9
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 3.3e-262 908.7 856 62.6
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 6.5e-258 894.4 846 59.6
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 5.5e-257 891.3 846 63.4
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 3.6e-256 888.6 846 63.1
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 1.1e-254 883.6 795 64.8
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 4.4e-254 881.7 846 62.8
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.3e-253 880.2 866 60.5
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 6.3e-253 877.9 862 61.3
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.1e-252 875.2 860 60.3
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.5e-251 873.2 847 62.3
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 7.7e-251 870.9 872 60.0
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 1.4e-249 866.7 864 60.4
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.9e-249 866.3 867 59.3
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 1.9e-249 866.3 864 58.2
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 3.2e-249 865.5 863 59.2
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 3.2e-249 865.5 871 58.3
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 7.2e-249 864.4 858 59.7
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 1.2e-248 863.6 789 64.8
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 1.2e-248 863.6 789 64.8
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 4.7e-248 861.7 872 59.5
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.7e-248 861.7 863 59.2
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 6.1e-248 861.3 867 59.1
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 2.3e-247 859.4 856 58.2
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.1e-246 857.1 856 58.1
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.4e-244 849.4 873 59.0
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 1.2e-243 847.0 860 59.3
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 5.9e-243 844.7 887 56.9
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 1.9e-241 839.7 774 63.0
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 3.6e-240 835.5 857 60.7
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.0e-239 833.9 870 57.8
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 1.4e-239 833.6 872 58.4
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 4.0e-239 832.0 872 58.7
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 1.5e-238 830.1 860 56.7
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.7e-237 826.6 855 58.5
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.8e-237 825.9 870 57.6
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 8.2e-237 824.3 859 55.6
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.6e-235 820.1 870 57.2
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.0e-231 807.4 859 55.6
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 6.8e-231 804.7 709 67.3
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 9.1e-228 794.3 845 56.9
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 9.1e-228 794.3 860 57.4
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 9.5e-225 784.3 862 57.5
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 2.8e-224 782.7 854 56.7
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 2.9e-218 762.7 850 54.9
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 5.0e-218 761.9 873 54.1
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 8.0e-216 754.6 853 55.3
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 3.7e-213 745.7 872 53.8
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 1.4e-212 743.8 839 55.9
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 3.7e-205 719.2 860 54.4
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 3.2e-204 716.1 854 53.7
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 1.0e-202 711.1 857 51.5
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 4.0e-199 699.1 847 53.5
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 1.3e-197 694.1 862 51.7
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 4.1e-196 689.1 854 53.2
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 3.5e-195 686.0 867 54.3
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 7.8e-195 684.9 865 54.5
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.3e-194 684.1 728 54.8
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 2.3e-194 683.3 870 49.0
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 3.9e-194 682.6 848 49.9
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 8.6e-194 681.4 867 52.6
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.5e-193 680.6 854 50.8
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 7.3e-193 678.3 866 53.9
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 1.2e-192 677.6 844 53.2
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 1.6e-192 677.2 841 53.3
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 4.0e-191 672.5 845 53.1
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.0e-190 670.2 862 51.0
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 3.4e-190 669.5 843 50.8
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 8.4e-189 664.8 846 52.7
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 1.9e-188 663.7 846 52.6
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 7.1e-188 661.8 851 52.3
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.6e-187 660.6 843 49.6
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 1.3e-184 651.0 847 52.5
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.6e-184 650.6 864 51.5
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 4.8e-184 649.0 826 52.8
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 4.8e-184 649.0 847 52.4
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 6.2e-184 648.7 740 53.9
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.4e-183 647.5 829 51.5
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 1.6e-179 634.0 843 49.0
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 2.1e-179 633.6 839 50.1
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 5.1e-178 629.0 839 51.7
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.5e-177 626.7 827 49.9
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 4.3e-177 625.9 841 49.8
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.1e-175 621.3 842 49.9
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 2.4e-175 620.2 842 49.9
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 3.1e-175 619.8 843 49.9
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 4.0e-175 619.4 842 50.0
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 5.8e-174 615.5 842 49.5
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-173 614.4 835 49.5
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 1.3e-173 614.4 675 57.8
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.2e-173 613.6 827 51.9
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 3.9e-170 602.8 858 49.0
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 3.8e-165 586.3 803 51.4
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 6.4e-165 585.5 862 48.1
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 7.1e-164 582.0 866 47.9
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 1.1e-161 574.7 924 47.3
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 1.3e-160 571.2 865 48.6
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 2.8e-160 570.1 866 48.7
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 4.8e-160 569.3 871 45.0
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.7e-155 553.5 755 48.3
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.3e-149 534.6 774 50.0
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 6.9e-143 512.3 821 45.4
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 6.7e-138 495.7 737 48.4
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 1.3e-128 464.9 802 44.8
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 2.0e-126 457.6 859 42.3
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 2.6e-126 457.2 834 45.2
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 2.5e-124 450.7 799 42.2
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 1.6e-123 448.0 497 57.9
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 3.1e-119 433.7 770 46.0
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 4.5e-118 429.9 866 42.1
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 2.9e-117 427.2 844 42.7
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 5.5e-108 396.4 874 41.3
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 1.2e-107 395.2 868 41.6
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 8.9e-106 389.0 872 42.2
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 7.5e-105 386.0 400 59.0
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 1.4e-103 381.7 772 40.9
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 3.5e-102 377.1 767 39.9
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.9e-96 357.5 886 39.5
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 2.9e-96 357.5 265 68.3
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 4.9e-96 356.7 886 39.4
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 1.6e-86 325.1 858 38.3
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.5e-84 318.5 596 45.5
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.7e-75 287.0 956 34.8
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 2.9e-72 277.7 876 32.9
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 2.7e-62 244.6 345 43.2
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 8.7e-61 239.6 469 42.2
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 4.8e-59 233.8 359 43.5
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.6e-57 228.0 295 45.1
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.9e-56 223.8 296 45.3
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 1.1e-52 212.6 333 41.1
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 4.3e-52 210.7 232 53.9
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 8.1e-51 206.5 356 39.9
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 1.1e-47 196.1 262 63.4
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 3.9e-45 187.6 327 37.9
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 1.9e-44 185.3 540 34.8
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 2.8e-43 181.4 97 95.9
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.8e-43 180.6 146 59.6
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.1e-39 169.5 281 39.9
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.0e-37 162.9 109 77.1
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.1e-34 152.9 219 42.5
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 6.3e-19 100.5 172 39.0


User provided reference genes

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