Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07722_v3 Cicer arietinum L. HOM05D007559 ORTHO05D009642 1.2e-106 389.8 198 100.0
Ca_07728_v3 Cicer arietinum L. HOM05D007559 ORTHO05D009642 1.2e-106 389.8 198 100.0
Ca_07735_v3 Cicer arietinum L. HOM05D007559 ORTHO05D009642 6.3e-34 148.3 114 72.8
TPR.G18675 Trifolium pratense HOM05D007559 ORTHO05D009642 2.6e-32 142.9 115 70.4
Psat3g121880 Pisum sativum HOM05D007559 ORTHO05D009642 1.5e-30 137.1 114 66.7
Glyma.09G279300 Glycine max HOM05D007559 ORTHO05D009642 2.3e-28 129.8 122 58.2
Lj1g0021884 Lotus japonicus HOM05D007559 ORTHO05D009642 6.3e-26 121.7 114 56.1
Medtr7g072070 Medicago truncatula HOM05D007559 ORTHO05D009642 8.2e-26 121.3 79 79.7
VMungo1383G3445 Vigna mungo HOM05D007559 ORTHO05D009642 1.4e-25 120.6 111 60.4
Glyma.18G209700 Glycine max HOM05D007559 ORTHO05D009642 3.1e-25 119.4 119 56.3
Lj2C64T2 Lonicera japonica HOM05D007559 ORTHO05D009642 4.1e-25 119.0 129 45.7
Migut.J00080 Erythranthe guttata HOM05D007559 ORTHO05D009642 5.9e-24 115.2 155 38.7
Lalb_Chr05g0229371 Lupinus albus HOM05D007559 ORTHO05D009642 5.9e-24 115.2 113 57.5
Phvul.009G202600 Phaseolus vulgaris HOM05D007559 ORTHO05D009642 5.9e-24 115.2 113 57.5
Phvul.008G089500 Phaseolus vulgaris HOM05D007559 ORTHO05D009642 1.0e-23 114.4 113 56.6
SalBow6G7175 Salvia bowleyana HOM05D007559 ORTHO05D009642 1.7e-23 113.6 164 36.6
Sc02g0000710 Simmondsia chinensis HOM05D007559 ORTHO05D009642 1.7e-23 113.6 153 43.1
SHI27995 Sapria himalayana HOM05D007559 ORTHO05D009642 5.0e-23 112.1 153 37.3
Sabra06G0082800 Salix brachista HOM05D007559 ORTHO05D009642 5.5e-22 108.6 127 46.5
Haze_21112 Corylus avellana HOM05D007559 ORTHO05D009642 8.0e-21 104.8 114 50.9
Cfa017088 Carpinus fangiana HOM05D007559 ORTHO05D009642 1.0e-20 104.4 114 50.0
MSTRG.5528 Avicennia marina HOM05D007559 ORTHO05D009642 2.3e-20 103.2 145 37.2
Potri.006G106400 Populus trichocarpa HOM05D007559 ORTHO05D009642 1.2e-19 100.9 127 44.1
CARHR133080 Cardamine hirsuta HOM05D007559 ORTHO05D009642 2.0e-19 100.1 155 34.8
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 4.4e-19 99.0 128 46.9
SGA_v2.0_scaffold85G26664 Striga asiatica HOM05D007559 ORTHO05D009642 8.3e-18 94.7 148 36.5
TWI77G1038 Tripterygium wilfordii HOM05D007559 ORTHO05D009642 2.4e-17 93.2 113 46.0
FAN05G3361 Fragaria x ananassa HOM05D007559 ORTHO05D009642 4.1e-17 92.4 113 46.9
Ciclev10013613m.g Citrus clementina HOM05D007559 ORTHO05D009642 5.4e-17 92.0 114 45.6
Eucgr.A00644 Eucalyptus grandis HOM05D007559 ORTHO05D009642 5.4e-17 92.0 112 42.0
ECA236G1374 Erigeron canadensis HOM05D007559 ORTHO05D009642 7.0e-17 91.7 146 35.6
FvH4_6g10340 Fragaria vesca HOM05D007559 ORTHO05D009642 1.6e-16 90.5 113 44.2
FAN09G4021 Fragaria x ananassa HOM05D007559 ORTHO05D009642 1.6e-16 90.5 113 44.2
FAN14G4426 Fragaria x ananassa HOM05D007559 ORTHO05D009642 1.6e-16 90.5 113 44.2
PSO384G3238 Papaver somniferum HOM05D007559 ORTHO05D009642 1.6e-16 90.5 136 38.2
Dinv35437 Davidia involucrata HOM05D007559 ORTHO05D009642 2.7e-16 89.7 113 43.4
FAN02G3738 Fragaria x ananassa HOM05D007559 ORTHO05D009642 2.7e-16 89.7 113 44.2
MD12G1182800 Malus domestica HOM05D007559 ORTHO05D009642 2.7e-16 89.7 113 44.2
FAN09G3233 Fragaria x ananassa HOM05D007559 ORTHO05D009642 5.9e-16 88.6 113 44.2
Manes.09G114100 Manihot esculenta HOM05D007559 ORTHO05D009642 5.9e-16 88.6 113 41.6
Duzib128G0753 Durio zibethinus HOM05D007559 ORTHO05D009642 7.7e-16 88.2 119 39.5
PSO339G0892 Papaver somniferum HOM05D007559 ORTHO05D009642 7.7e-16 88.2 138 37.0
Prupe.6G287300 Prunus persica HOM05D007559 ORTHO05D009642 1.3e-15 87.4 113 43.4
Gohir.A01G230700 Gossypium hirsutum HOM05D007559 ORTHO05D009642 8.5e-15 84.7 123 37.4
MD04G1169100 Malus domestica HOM05D007559 ORTHO05D009642 1.9e-14 83.6 112 42.9
CANSAT35G1217 Cannabis sativa HOM05D007559 ORTHO05D009642 3.2e-14 82.8 125 38.4
Atru.chr8.2360 Acer truncatum HOM05D007559 ORTHO05D009642 4.2e-14 82.4 115 45.2
MELO3C031038.2 Cucumis melo HOM05D007559 ORTHO05D009642 4.2e-14 82.4 111 41.4
QL07p033351 Quercus lobata HOM05D007559 ORTHO05D009642 4.2e-14 82.4 113 41.6
CANSAT80G0499 Cannabis sativa HOM05D007559 ORTHO05D009642 7.2e-14 81.6 120 40.8
Sed0024504 Sechium edule HOM05D007559 ORTHO05D009642 9.4e-14 81.3 111 41.4
DCAR_028899 Daucus carota HOM05D007559 ORTHO05D009642 1.2e-13 80.9 115 42.6
Gorai.002G267400 Gossypium raimondii HOM05D007559 ORTHO05D009642 1.2e-13 80.9 122 36.9
CsaV3_3G033270 Cucumis sativus L. HOM05D007559 ORTHO05D009642 2.7e-13 79.7 111 37.8
Thecc.05G003800 Theobroma cacao HOM05D007559 ORTHO05D009642 2.7e-13 79.7 115 38.3
CAN.G481.10 Capsicum annuum HOM05D007559 ORTHO05D009642 1.0e-12 77.8 128 35.2
QL07p033370 Quercus lobata HOM05D020603 ORTHO05D019575 1.0e-12 77.8 54 63.0
COL.COLO4_14426 Corchorus olitorius HOM05D007559 ORTHO05D009642 4.0e-12 75.9 119 36.1
Nn2g13304 Nelumbo nucifera HOM05D007559 ORTHO05D009642 4.0e-12 75.9 114 38.6
QL07p033420 Quercus lobata HOM05D020603 ORTHO05D019575 1.2e-11 74.3 71 52.1
QL07p033365 Quercus lobata HOM05D020603 ORTHO05D019575 1.5e-11 73.9 54 63.0
TAR623G0780 Trochodendron aralioides HOM05D007559 ORTHO05D009642 1.5e-11 73.9 113 41.6
TAR623G1207 Trochodendron aralioides HOM05D007559 ORTHO05D009642 1.5e-11 73.9 113 41.6
Nitab4.5_0003592g0030 Nicotiana tabacum HOM05D007559 ORTHO05D009642 2.6e-11 73.2 108 38.0
TAR623G1276 Trochodendron aralioides HOM05D007559 ORTHO05D009642 3.4e-11 72.8 75 52.0
TAR623G0609 Trochodendron aralioides HOM05D007559 ORTHO05D009642 4.4e-11 72.4 113 40.7
Ah.08g209840 Amaranthus hybridus HOM05D007559 ORTHO05D009642 7.5e-11 71.6 115 34.8
AUR62006326 Chenopodium quinoa HOM05D007559 ORTHO05D009642 1.7e-10 70.5 77 50.6
CDE06G1936 Ceratophyllum demersum HOM05D002411 ORTHO05D002564 2.2e-10 70.1 82 39.0
Rhsim04G0048900 Rhododendron simsii HOM05D007559 ORTHO05D009642 2.2e-10 70.1 127 33.9
EL10Ac7g17033 Beta vulgaris HOM05D007559 ORTHO05D009642 3.7e-10 69.3 115 36.5
Rhsim04G0082900 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.7e-10 69.3 157 30.6
Carub.0004s2039 Capsella rubella HOM05D020603 ORTHO05D019575 4.9e-10 68.9 57 50.9
Nitab4.5_0000047g0060 Nicotiana tabacum HOM05D007559 ORTHO05D009642 6.3e-10 68.6 108 37.0
Aqoxy2G02373 Aquilegia oxysepala HOM05D007559 ORTHO05D009642 1.1e-09 67.8 75 45.3
AL4G35690 Arabidopsis lyrata HOM05D007559 ORTHO05D009642 1.8e-09 67.0 112 35.7
C04p09160 Brassica napus HOM05D007559 ORTHO05D009642 2.4e-09 66.6 112 33.9
Thhalv10017948m.g Eutrema salsugineum HOM05D007559 ORTHO05D009642 5.4e-09 65.5 112 34.8
Sp4g20740 Schrenkiella parvula HOM05D007559 ORTHO05D009642 5.4e-09 65.5 112 33.9
A05p07630 Brassica napus HOM05D007559 ORTHO05D009642 1.2e-08 64.3 112 31.2
BraA05t19732Z Brassica rapa HOM05D007559 ORTHO05D009642 2.7e-08 63.2 112 31.2
AT2G38420 Arabidopsis thaliana HOM05D007559 ORTHO05D009642 3.5e-08 62.8 112 33.9
BcaB02g09190 Brassica carinata HOM05D007559 ORTHO05D009642 4.5e-08 62.4 112 31.2
Lsat_1_v5_gn_7_12941 Lactuca sativa HOM05D007559 ORTHO05D009642 4.5e-08 62.4 91 41.8
Solyc09g014930.1 Solanum lycopersicum HOM05D007559 ORTHO05D009642 5.9e-08 62.0 73 41.1
TAR623G1049 Trochodendron aralioides HOM05D020603 ORTHO05D019575 7.7e-08 61.6 39 66.7
Sopen09g007840 Solanum pennellii HOM05D007559 ORTHO05D009642 1.0e-07 61.2 73 41.1
HanXRQChr12g0363701 Helianthus annuus HOM05D007559 ORTHO05D009642 1.3e-07 60.8 141 28.4
BolC4t22525H Brassica oleracea HOM05D007559 ORTHO05D009642 1.7e-07 60.5 112 31.2
PGSC0003DMG400026609 Solanum tuberosum HOM05D007559 ORTHO05D009642 3.8e-07 59.3 73 41.1
CsaV3_5G005760 Cucumis sativus L. HOM05D003039 ORTHO05D008410 6.6e-07 58.5 184 25.5
Sed0020593 Sechium edule HOM05D006080 ORTHO05D007382 8.6e-07 58.2 152 28.3
Aa31LG5G23900 Aethionema arabicum HOM05D007559 ORTHO05D009642 1.1e-06 57.8 112 31.2
HPP92_026434 Vanilla planifolia HOM05D002453 ORTHO05D002107 1.1e-06 57.8 158 26.6
Actinidia32551 Actinidia chinensis HOM05D007559 ORTHO05D009642 1.5e-06 57.4 52 46.2
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 3.3e-06 56.2 149 26.8
ATR0124G035 Amborella trichopoda HOM05D007347 ORTHO05D009296 4.3e-06 55.8 111 28.8
GSVIVG01019040001 Vitis vinifera HOM05D006999 ORTHO05D008936 4.3e-06 55.8 144 28.5
Ciclev10011148m.g Citrus clementina HOM05D000855 ORTHO05D008530 7.3e-06 55.1 116 29.3
Sp1g09630 Schrenkiella parvula HOM05D007322 ORTHO05D009029 7.3e-06 55.1 170 25.9
BcaB02g09189 Brassica carinata HOM05D007559 ORTHO05D019575 9.5e-06 54.7 41 51.2


User provided reference genes

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