Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07683_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.1e-203 713.0 344 100.0
Ca_07680_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.4e-137 493.4 332 73.5
Ca_07674_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 5.3e-113 411.8 331 65.0
Ca_07681_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 7.7e-104 381.3 329 61.7
Ca_07672_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 6.5e-103 378.3 329 60.2
Ca_07673_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.4e-100 370.5 333 59.2
TPR.G21321 Trifolium pratense HOM05D010147 ORTHO05D006739 3.2e-86 322.8 346 52.9
Medtr1g069530 Medicago truncatula HOM05D010147 ORTHO05D006739 5.5e-86 322.0 349 52.4
Medtr1g069525 Medicago truncatula HOM05D010147 ORTHO05D006739 2.7e-85 319.7 343 53.1
Medtr7g069800 Medicago truncatula HOM05D010147 ORTHO05D006739 5.2e-84 315.5 342 52.6
Medtr7g069820 Medicago truncatula HOM05D010147 ORTHO05D006739 2.2e-82 310.1 342 52.9
Medtr7g069870 Medicago truncatula HOM05D010147 ORTHO05D006739 2.4e-81 306.6 341 51.9
Medtr7g069850 Medicago truncatula HOM05D010147 ORTHO05D006739 1.6e-80 303.9 334 51.8
Lj1g0005351 Lotus japonicus HOM05D010147 ORTHO05D006739 6.5e-79 298.5 349 48.4
Medtr1g025800 Medicago truncatula HOM05D010147 ORTHO05D006739 3.6e-77 292.7 343 49.9
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 3.0e-76 289.7 352 48.9
TPR.G6682 Trifolium pratense HOM05D010147 ORTHO05D006739 8.3e-74 281.6 351 49.6
TPR.G38170 Trifolium pratense HOM05D010147 ORTHO05D006739 1.5e-70 270.8 346 47.4
Medtr7g069840 Medicago truncatula HOM05D010147 ORTHO05D006739 2.5e-70 270.0 302 53.3
Lalb_Chr19g0124301 Lupinus albus HOM05D010147 ORTHO05D006739 6.2e-45 185.7 349 36.4
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 2.7e-32 143.7 367 30.8
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 1.3e-29 134.8 367 30.0
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 8.1e-29 132.1 373 28.4
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-27 128.3 373 28.2
TPR.G25164 Trifolium pratense HOM05D010147 ORTHO05D006739 7.6e-27 125.6 349 28.9
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-26 123.6 305 31.5
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 2.9e-26 123.6 360 31.1
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.2e-25 119.8 340 29.4
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 7.1e-25 119.0 340 28.5
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.1e-25 119.0 344 29.7
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.3e-25 118.6 340 28.5
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-24 118.2 345 29.6
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 2.7e-24 117.1 307 32.2
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.0e-24 115.9 359 27.9
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 7.9e-24 115.5 349 31.2
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 1.3e-23 114.8 241 31.1
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-23 114.0 267 32.6
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.0e-23 113.6 307 31.9
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 3.9e-23 113.2 363 27.3
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-20 104.4 273 29.7
Medtr7g100490 Medicago truncatula HOM05D010147 ORTHO05D006739 2.4e-20 104.0 112 54.5
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-20 103.6 285 29.5
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-20 103.6 285 29.5
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.9e-20 102.4 287 32.1
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 9.0e-20 102.1 371 27.5
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-19 101.7 331 27.8
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.0e-19 100.9 287 32.1
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 1.3e-18 98.2 282 28.4
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-18 97.1 289 31.8
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 6.4e-18 95.9 222 34.2
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.4e-18 95.9 378 27.2
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-17 95.1 282 27.7
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 1.9e-17 94.4 280 26.8
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-17 94.0 316 28.8
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 3.2e-17 93.6 205 32.2
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.5e-17 92.8 229 30.6
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.5e-17 92.8 359 27.6
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.7e-16 90.5 331 25.1
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.9e-16 89.0 337 27.0
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 1.0e-15 88.6 359 27.3
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 3.0e-15 87.0 337 28.5
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.0e-15 87.0 337 28.5
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 5.6e-14 82.8 313 27.2
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 5.6e-14 82.8 380 23.9
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.4e-14 82.4 313 27.2
Lalb_Chr19g0133241 Lupinus albus HOM05D006368 ORTHO05D006739 1.6e-13 81.3 353 26.1
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 2.8e-13 80.5 266 25.9
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.7e-13 80.1 317 24.9
Aqoxy5G01074 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.8e-13 79.7 221 29.0
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.1e-13 79.0 186 29.6
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.1e-13 79.0 186 29.6
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 1.1e-12 78.6 286 25.5
FvH4_6g39721 Fragaria vesca HOM05D006368 ORTHO05D006739 2.4e-12 77.4 184 34.8
Medtr3g114970 Medicago truncatula HOM05D000151 ORTHO05D000074 2.4e-12 77.4 185 29.7
TPR.G6699 Trifolium pratense HOM05D010147 ORTHO05D006739 9.0e-12 75.5 96 44.8
FAN14G3691 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.0e-11 74.3 226 25.7
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 2.6e-11 73.9 190 25.3
Dinv43798 Davidia involucrata HOM05D000713 ORTHO05D000547 2.6e-11 73.9 190 25.3
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-11 73.9 250 28.4
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 5.8e-11 72.8 237 26.6
MBI17_g17509_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 7.6e-11 72.4 189 28.6
Dinv20250 Davidia involucrata HOM05D000151 ORTHO05D000074 1.3e-10 71.6 192 31.2
Dinv20253 Davidia involucrata HOM05D000151 ORTHO05D000074 1.7e-10 71.2 192 30.7
FvH4_4g05011 Fragaria vesca HOM05D000151 ORTHO05D000074 2.2e-10 70.9 195 25.1
Lj2g0009806 Lotus japonicus HOM05D006368 ORTHO05D006739 2.9e-10 70.5 246 24.0
MBI12_g28746_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.8e-10 70.1 206 27.2
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.5e-10 69.3 217 29.5
MBI19_g33448_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.9e-09 67.8 228 26.8
Sopen02g019040 Solanum pennellii HOM05D001286 ORTHO05D000440 1.9e-09 67.8 223 23.8
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.2e-09 67.0 156 36.5
FAN02G2364 Fragaria x ananassa HOM05D011252 ORTHO05D029353 9.3e-09 65.5 187 29.9
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.6e-08 64.7 205 28.8
FvH4_6g46020 Fragaria vesca HOM05D006368 ORTHO05D025547 3.5e-08 63.5 205 28.3
FAN14G1520 Fragaria x ananassa HOM05D006368 ORTHO05D025547 3.5e-08 63.5 205 28.3
FAN14G5490 Fragaria x ananassa HOM05D006368 ORTHO05D025547 3.5e-08 63.5 205 28.3
RcHm_v2.0_Chr5g0063131 Rosa chinensis HOM05D007346 ORTHO05D009044 4.6e-08 63.2 232 27.2
COL.COLO4_15078 Corchorus olitorius HOM05D010078 ORTHO05D000440 6.0e-08 62.8 178 24.7
FAN02G0730 Fragaria x ananassa HOM05D011252 ORTHO05D013603 1.0e-07 62.0 186 30.6
FAN15G3747 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.0e-07 62.0 128 32.8
Cfa018639 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.3e-07 61.6 190 24.2
FAN12G3589 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.3e-07 61.6 134 26.1
Aqoxy7G01873 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-07 61.2 182 25.8
Dinv25349 Davidia involucrata HOM05D006368 ORTHO05D006739 1.8e-07 61.2 162 27.8
FvH4_4g01551 Fragaria vesca HOM05D007346 ORTHO05D009044 1.8e-07 61.2 200 26.0
FAN12G2737 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.8e-07 61.2 296 21.3
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 5.1e-07 59.7 198 24.2
FvH4_4g02090 Fragaria vesca HOM05D007346 ORTHO05D009044 5.1e-07 59.7 194 23.2
FvH4_2g13532 Fragaria vesca HOM05D006368 ORTHO05D006739 8.7e-07 58.9 213 23.0
TWI56G0115 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 8.7e-07 58.9 135 31.1
COL.COLO4_15066 Corchorus olitorius HOM05D010078 ORTHO05D000440 1.1e-06 58.5 184 27.2
FAN17G1663 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-06 58.5 244 27.9
Aqoxy7G02804 Aquilegia oxysepala HOM05D008995 ORTHO05D000074 1.5e-06 58.2 178 23.0
FAN20G2910 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.5e-06 58.2 235 23.8
FAN15G1854 Fragaria x ananassa HOM05D007346 ORTHO05D009044 1.9e-06 57.8 211 28.9
PGSC0003DMG400046531 Solanum tuberosum HOM05D009171 ORTHO05D000440 1.9e-06 57.8 222 23.9
Aqoxy7G00556 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.5e-06 57.4 190 24.7
COL.COLO4_15077 Corchorus olitorius HOM05D010078 ORTHO05D000440 2.5e-06 57.4 217 22.1
Dinv28382 Davidia involucrata HOM05D000151 ORTHO05D000074 2.5e-06 57.4 196 25.5
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 2.5e-06 57.4 127 30.7
Nitab4.5_0002367g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.3e-06 57.0 215 26.0
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 5.7e-06 56.2 124 31.5
FAN17G1775 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.7e-06 56.2 131 25.2
FAN02G1443 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.4e-06 55.8 161 27.3


User provided reference genes

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