Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07676_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 4.7e-160 567.8 280 100.0
TPR.G21326 Trifolium pratense HOM05D007653 ORTHO05D009670 1.1e-108 397.1 278 73.4
Medtr7g069710 Medicago truncatula HOM05D007653 ORTHO05D009670 1.3e-101 373.6 276 72.5
Glyma.07G154000 Glycine max HOM05D007653 ORTHO05D009670 1.0e-82 310.8 276 65.2
VMungo1383G1231 Vigna mungo HOM05D007653 ORTHO05D009670 1.7e-72 276.9 266 60.5
Glyma.03G051200 Glycine max HOM05D007653 ORTHO05D009670 1.8e-71 273.5 263 59.3
Glyma.01G124000 Glycine max HOM05D007653 ORTHO05D009670 7.0e-71 271.6 263 58.9
Lj3g0004323 Lotus japonicus HOM05D007653 ORTHO05D009670 3.2e-68 262.7 270 58.9
Phvul.010G060900 Phaseolus vulgaris HOM05D007653 ORTHO05D009670 2.2e-64 250.0 265 56.6
Phvul.008G094700 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 4.1e-63 245.7 240 61.2
VMungo0331G0216 Vigna mungo HOM05D007653 ORTHO05D009670 2.7e-62 243.0 266 54.5
Lalb_Chr01g0023261 Lupinus albus HOM05D007653 ORTHO05D009670 1.2e-59 234.2 316 46.5
Lalb_Chr12g0207101 Lupinus albus HOM05D007653 ORTHO05D009670 1.8e-58 230.3 280 52.9
Medtr4g014670 Medicago truncatula HOM05D007653 ORTHO05D009670 8.3e-48 194.9 275 49.5
TPR.G5265 Trifolium pratense HOM05D007653 ORTHO05D009670 7.0e-47 191.8 278 50.7
Manes.09G109500 Manihot esculenta HOM05D007653 ORTHO05D009670 2.0e-46 190.3 268 47.0
Psat7g247360 Pisum sativum HOM05D007653 ORTHO05D009670 5.0e-45 185.7 272 49.6
CiPaw.10G159500 Carya illinoinensis HOM05D007653 ORTHO05D009670 6.6e-45 185.3 278 46.4
QL07p034260 Quercus lobata HOM05D007653 ORTHO05D009670 8.6e-45 184.9 283 46.6
Cfa017149 Carpinus fangiana HOM05D007653 ORTHO05D009670 4.4e-41 172.6 280 42.1
Prupe.6G282500 Prunus persica HOM05D007653 ORTHO05D009670 2.4e-39 166.8 273 44.0
Duzib093G1250 Durio zibethinus HOM05D007653 ORTHO05D009670 4.1e-39 166.0 286 40.2
arahy.Tifrunner.gnm1.ann1.4LI2NJ Arachis hypogaea HOM05D007653 ORTHO05D009670 2.7e-38 163.3 255 44.7
Gohir.D01G218900 Gossypium hirsutum HOM05D007653 ORTHO05D009670 1.3e-37 161.0 258 41.1
Gorai.002G265600 Gossypium raimondii HOM05D007653 ORTHO05D009670 1.3e-37 161.0 259 41.7
Thecc.05G009700 Theobroma cacao HOM05D007653 ORTHO05D009670 3.9e-37 159.5 277 40.4
Gohir.A01G229000 Gossypium hirsutum HOM05D007653 ORTHO05D009670 5.0e-37 159.1 261 41.4
Atru.chr8.2298 Acer truncatum HOM05D007653 ORTHO05D009670 1.6e-35 154.1 299 40.1
MD04G1163000 Malus domestica HOM05D007653 ORTHO05D009670 2.8e-35 153.3 275 41.8
FAN05G3332 Fragaria x ananassa HOM05D007653 ORTHO05D009670 4.7e-35 152.5 281 42.7
RcHm_v2.0_Chr3g0462281 Rosa chinensis HOM05D007653 ORTHO05D009670 1.4e-34 151.0 273 42.9
Potri.016G123700 Populus trichocarpa HOM05D007653 ORTHO05D009670 1.8e-34 150.6 283 39.9
Ciclev10012426m.g Citrus clementina HOM05D007653 ORTHO05D009670 2.6e-33 146.7 289 40.1
FAN14G3858 Fragaria x ananassa HOM05D001497 ORTHO05D001619 4.9e-32 142.5 252 43.3
Oeu057628.1 Olea europaea HOM05D007653 ORTHO05D009670 9.2e-31 138.3 235 41.3
Ca_20332_v3 Cicer arietinum L. HOM05D007653 ORTHO05D009670 1.6e-30 137.5 218 45.4
COL.COLO4_14486 Corchorus olitorius HOM05D007653 ORTHO05D009670 1.6e-30 137.5 284 37.7
TAR369G0435 Trochodendron aralioides HOM05D007653 ORTHO05D009670 1.0e-29 134.8 268 40.7
TWI74G0740 Tripterygium wilfordii HOM05D007653 ORTHO05D009670 3.9e-29 132.9 271 39.1
Actinidia20753 Actinidia chinensis HOM05D007653 ORTHO05D009670 1.1e-28 131.3 248 40.7
Dinv08443 Davidia involucrata HOM05D007653 ORTHO05D009670 3.3e-28 129.8 279 38.4
Sabra16G0118500 Salix brachista HOM05D007653 ORTHO05D009670 4.3e-28 129.4 280 38.2
Sed0001003 Sechium edule HOM05D007653 ORTHO05D009670 6.8e-26 122.1 282 36.9
ClCG04G006820 Citrullus lanatus HOM05D007653 ORTHO05D009670 2.6e-25 120.2 291 36.1
MELO3C026011.2 Cucumis melo HOM05D007653 ORTHO05D009670 2.6e-25 120.2 282 37.2
Aqoxy2G00810 Aquilegia oxysepala HOM05D007653 ORTHO05D009670 5.8e-25 119.0 262 35.9
Haze_21051 Corylus avellana HOM05D007653 ORTHO05D009670 7.6e-25 118.6 276 35.1
ECA247G1536 Erigeron canadensis HOM05D007653 ORTHO05D009670 3.7e-24 116.3 235 39.1
CsaV3_4G026460 Cucumis sativus L. HOM05D007653 ORTHO05D009670 8.4e-24 115.2 300 36.7
Cpa.g.sc120.35 Carica papaya HOM05D007653 ORTHO05D009670 1.9e-23 114.0 259 36.3
DCAR_028874 Daucus carota HOM05D007653 ORTHO05D009670 1.9e-23 114.0 235 37.4
Eucgr.K00125 Eucalyptus grandis HOM05D007653 ORTHO05D009670 1.9e-23 114.0 255 37.6
PGSC0003DMG400026639 Solanum tuberosum HOM05D007653 ORTHO05D009670 6.6e-21 105.5 276 34.4
Thhalv10010652m.g Eutrema salsugineum HOM05D007653 ORTHO05D009670 2.5e-20 103.6 261 34.1
AT3G51760 Arabidopsis thaliana HOM05D007653 ORTHO05D009670 9.6e-20 101.7 253 33.6
CARHR161390 Cardamine hirsuta HOM05D007653 ORTHO05D009670 9.6e-20 101.7 257 33.9
A09p44930 Brassica napus HOM05D007653 ORTHO05D009670 2.1e-19 100.5 262 33.6
BraA09t39952Z Brassica rapa HOM05D007653 ORTHO05D009670 2.1e-19 100.5 262 33.6
AL5G32220 Arabidopsis lyrata HOM05D007653 ORTHO05D009670 4.7e-19 99.4 255 34.1
BcaB01g00421 Brassica carinata HOM05D007653 ORTHO05D009670 6.2e-19 99.0 263 32.7
BcaB01g00481 Brassica carinata HOM05D007653 ORTHO05D009670 6.2e-19 99.0 262 33.2
C08p26990 Brassica napus HOM05D007653 ORTHO05D009670 6.2e-19 99.0 262 33.2
BolC8t50316H Brassica oleracea HOM05D007653 ORTHO05D009670 6.2e-19 99.0 262 33.2
Rhsim04G0175600 Rhododendron simsii HOM05D007653 ORTHO05D009670 6.2e-19 99.0 272 33.1
Peaxi162Scf01132g00319 Petunia axillaris HOM05D007653 ORTHO05D009670 8.1e-19 98.6 246 36.2
THA.LOC104806615 Tarenaya hassleriana HOM05D007653 ORTHO05D009670 1.1e-18 98.2 260 33.5
Carub.0005s1811 Capsella rubella HOM05D007653 ORTHO05D009670 1.8e-18 97.4 255 33.3
Actinidia32531 Actinidia chinensis HOM05D007653 ORTHO05D009670 2.4e-18 97.1 247 35.2
Lsat_1_v5_gn_9_37441 Lactuca sativa HOM05D007653 ORTHO05D009670 2.4e-18 97.1 241 36.5
Nn2g10953 Nelumbo nucifera HOM05D007653 ORTHO05D009670 3.1e-18 96.7 261 33.0
Sp5g10510 Schrenkiella parvula HOM05D007653 ORTHO05D009670 3.1e-18 96.7 258 33.7
Aa31sc892G20 Aethionema arabicum HOM05D007653 ORTHO05D009670 4.0e-18 96.3 254 32.3
Cc06_g00860 Coffea canephora HOM05D007653 ORTHO05D009670 2.6e-17 93.6 312 29.8
CAN.G588.49 Capsicum annuum HOM05D007653 ORTHO05D009670 3.4e-17 93.2 278 31.7
Migut.L02038 Erythranthe guttata HOM05D007653 ORTHO05D009670 4.4e-17 92.8 273 35.9
Solyc09g005020.1 Solanum lycopersicum HOM05D007653 ORTHO05D009670 9.9e-17 91.7 274 33.2
Sc07g0006490 Simmondsia chinensis HOM05D007653 ORTHO05D009670 2.2e-16 90.5 283 31.4
Cc06_g00970 Coffea canephora HOM05D001108 ORTHO05D001619 6.4e-16 89.0 205 35.1
AUR62030507 Chenopodium quinoa HOM05D007653 ORTHO05D009670 1.3e-13 81.3 279 29.0
EL10Ac5g12516 Beta vulgaris HOM05D007653 ORTHO05D009670 1.5e-12 77.8 261 30.3
PSO339G6297 Papaver somniferum HOM05D007653 ORTHO05D009670 2.1e-11 73.9 270 30.7
FAN09G3847 Fragaria x ananassa HOM05D007653 ORTHO05D009670 2.8e-11 73.6 263 32.3
SGA_v2.0_scaffold110G31197 Striga asiatica HOM05D007653 ORTHO05D009670 3.6e-11 73.2 246 30.1
Nn7g37369 Nelumbo nucifera HOM05D007653 ORTHO05D009670 1.1e-10 71.6 180 33.3
Nitab4.5_0009553g0030 Nicotiana tabacum HOM05D007653 ORTHO05D009670 1.1e-10 71.6 247 30.4
AUR62030786 Chenopodium quinoa HOM05D007653 ORTHO05D009670 2.0e-09 67.4 201 31.3
FAN02G3974 Fragaria x ananassa HOM05D007653 ORTHO05D009670 3.4e-09 66.6 125 43.2
Aa31LG6G6300 Aethionema arabicum HOM05D002063 ORTHO05D002075 1.1e-07 61.6 195 30.3
A08p25230 Brassica napus HOM05D002063 ORTHO05D002075 1.4e-07 61.2 213 27.7
BraA08t34475Z Brassica rapa HOM05D002063 ORTHO05D002075 2.4e-07 60.5 207 28.0
BcaC01g00085 Brassica carinata HOM05D002063 ORTHO05D002075 4.2e-07 59.7 207 29.0
C03p75610 Brassica napus HOM05D002063 ORTHO05D002075 4.2e-07 59.7 207 29.0
BolC3t19818H Brassica oleracea HOM05D002063 ORTHO05D002075 4.2e-07 59.7 207 29.0
COL.COLO4_31282 Corchorus olitorius HOM05D002063 ORTHO05D002075 9.3e-07 58.5 210 26.7
CiPaw.09G070400 Carya illinoinensis HOM05D002063 ORTHO05D002075 6.0e-06 55.8 207 29.5
Nn4g22427 Nelumbo nucifera HOM05D007653 ORTHO05D009670 6.0e-06 55.8 86 38.4


User provided reference genes

Program Settings