Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07674_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.0e-240 836.3 400 100.0
Ca_07680_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 7.3e-130 468.0 403 60.3
Ca_07683_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.9e-114 416.8 331 65.0
Ca_07681_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 6.8e-104 381.7 398 52.3
Ca_07672_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.1e-97 360.1 399 49.9
TPR.G21321 Trifolium pratense HOM05D010147 ORTHO05D006739 6.8e-96 355.1 416 48.6
Medtr1g069525 Medicago truncatula HOM05D010147 ORTHO05D006739 2.6e-95 353.2 409 49.6
Medtr7g069870 Medicago truncatula HOM05D010147 ORTHO05D006739 1.0e-91 341.3 413 48.2
Medtr7g069800 Medicago truncatula HOM05D010147 ORTHO05D006739 2.3e-91 340.1 415 48.9
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 6.6e-91 338.6 426 46.7
Medtr1g069530 Medicago truncatula HOM05D010147 ORTHO05D006739 8.7e-91 338.2 411 48.7
TPR.G6682 Trifolium pratense HOM05D010147 ORTHO05D006739 2.5e-90 336.7 421 47.5
Medtr7g069820 Medicago truncatula HOM05D010147 ORTHO05D006739 5.6e-90 335.5 414 48.3
TPR.G38170 Trifolium pratense HOM05D010147 ORTHO05D006739 1.5e-87 327.4 426 46.2
Ca_07673_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 7.6e-87 325.1 407 45.7
Medtr7g069850 Medicago truncatula HOM05D010147 ORTHO05D006739 3.9e-83 312.8 394 47.2
Medtr7g069840 Medicago truncatula HOM05D010147 ORTHO05D006739 1.1e-77 294.7 368 47.3
Medtr1g025800 Medicago truncatula HOM05D010147 ORTHO05D006739 1.7e-70 270.8 365 46.0
Lj1g0005351 Lotus japonicus HOM05D010147 ORTHO05D006739 7.4e-66 255.4 342 45.9
Lalb_Chr19g0124301 Lupinus albus HOM05D010147 ORTHO05D006739 7.7e-55 218.8 418 34.7
TPR.G6699 Trifolium pratense HOM05D010147 ORTHO05D006739 8.0e-36 155.6 158 51.3
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 5.9e-31 139.4 450 28.7
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 2.5e-29 134.0 350 31.7
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 3.2e-29 133.7 456 27.4
TPR.G25164 Trifolium pratense HOM05D010147 ORTHO05D006739 7.2e-29 132.5 429 27.7
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 4.7e-28 129.8 454 26.7
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 1.3e-25 121.7 424 27.8
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 2.2e-25 120.9 354 30.8
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 1.4e-24 118.2 315 31.1
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-24 117.9 280 32.5
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-24 117.5 378 30.2
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 3.1e-24 117.1 393 27.5
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 5.4e-24 116.3 398 29.1
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-23 115.2 313 30.4
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.7e-23 114.0 446 26.0
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.5e-23 113.6 378 30.4
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 3.5e-23 113.6 419 27.4
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.2e-21 106.7 415 27.7
FvH4_6g39721 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-20 105.1 318 30.8
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-20 105.1 280 32.1
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-20 105.1 280 32.1
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 2.1e-20 104.4 343 27.7
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.6e-20 103.6 413 26.2
Ca_03009_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 4.7e-20 103.2 284 29.9
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 6.1e-20 102.8 324 30.6
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 8.0e-20 102.4 425 27.3
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 1.4e-19 101.7 438 24.9
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.4e-19 101.7 429 27.5
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 1.8e-19 101.3 328 29.9
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-19 101.3 436 24.3
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-19 100.9 378 27.2
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-19 100.9 378 27.2
Dinv25349 Davidia involucrata HOM05D006368 ORTHO05D006739 4.0e-19 100.1 243 30.5
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.4e-18 96.7 334 27.5
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.7e-18 96.3 420 24.8
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 2.8e-17 94.0 360 25.8
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.9e-17 93.2 333 26.1
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 6.3e-17 92.8 398 25.1
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 1.4e-16 91.7 424 25.7
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 2.4e-16 90.9 398 26.6
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-16 90.9 443 26.2
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-16 90.5 376 24.2
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.4e-16 89.7 318 28.6
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 7.0e-16 89.4 413 25.2
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.0e-16 89.4 219 29.7
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 9.2e-16 89.0 443 26.0
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.2e-16 89.0 368 26.9
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.0e-15 87.8 322 26.1
Medtr7g100490 Medicago truncatula HOM05D010147 ORTHO05D006739 4.5e-15 86.7 118 44.1
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 1.0e-14 85.5 394 25.1
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-14 84.7 369 26.3
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.7e-14 84.7 294 28.6
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.9e-14 84.0 296 28.4
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.9e-14 84.0 431 25.8
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-13 82.0 174 32.2
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-13 82.0 267 30.7
Lj2g0009806 Lotus japonicus HOM05D006368 ORTHO05D006739 3.3e-13 80.5 429 23.5
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-12 78.6 245 27.3
SGA_v2.0_scaffold351G49652 Striga asiatica HOM05D000151 ORTHO05D000074 2.1e-12 77.8 370 25.4
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-11 75.5 407 24.1
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 1.8e-11 74.7 204 29.9
TWI56G0115 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.8e-11 74.7 447 25.3
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 2.3e-11 74.3 413 24.9
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.0e-11 73.9 433 22.6
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 3.0e-11 73.9 335 23.9
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 5.2e-11 73.2 152 33.6
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 8.9e-11 72.4 326 27.3
FAN05G1788 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.2e-10 72.0 325 26.2
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-10 70.9 391 25.8
TAR636G2826 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.4e-10 70.1 433 24.0
Aqoxy5G01074 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.3e-09 65.9 285 26.0
FvH4_5g03600 Fragaria vesca HOM05D010931 ORTHO05D013603 1.4e-08 65.1 219 26.5
MBI17_g17509_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.4e-08 65.1 214 27.6
FAN18G3160 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.4e-08 64.3 219 26.9
Dinv43798 Davidia involucrata HOM05D000713 ORTHO05D000547 5.4e-08 63.2 345 22.9
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.4e-08 63.2 302 24.2
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.0e-08 62.8 212 30.7
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 9.2e-08 62.4 428 22.9
FAN04G1211 Fragaria x ananassa HOM05D010931 ORTHO05D013603 9.2e-08 62.4 219 26.0
Nn1g04030 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.2e-07 62.0 319 25.7
FAN04G2702 Fragaria x ananassa HOM05D010931 ORTHO05D013603 2.0e-07 61.2 218 25.7
Ca_20712_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 4.6e-07 60.1 335 24.5
FAN28G1502 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-06 57.0 113 33.6
TWI56G0068 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.0e-06 56.6 149 28.2
FAN08G1863 Fragaria x ananassa HOM05D010931 ORTHO05D013603 6.6e-06 56.2 140 28.6


User provided reference genes

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