Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 2.3e-304 1048.1 548 100.0
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 2.3e-304 1048.1 548 100.0
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 2.1e-244 849.0 524 86.8
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 3.2e-237 825.1 524 84.4
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 7.1e-237 823.9 524 84.4
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 3.5e-236 821.6 524 84.0
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 1.6e-233 812.8 525 82.9
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 8.2e-233 810.4 524 83.0
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 8.2e-233 810.4 524 83.0
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 1.1e-232 810.1 524 81.9
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.1e-229 800.0 524 82.1
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 5.5e-229 797.7 524 81.1
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 7.1e-229 797.3 524 81.1
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.2e-228 796.6 524 82.1
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 1.6e-228 796.2 525 81.3
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 2.1e-228 795.8 524 81.3
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 2.1e-228 795.8 524 80.7
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 2.1e-228 795.8 524 80.9
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 2.7e-228 795.4 524 81.5
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 6.1e-228 794.3 524 81.7
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 1.0e-227 793.5 524 81.5
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 2.3e-227 792.3 524 81.1
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 3.0e-227 792.0 524 80.3
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 3.0e-227 792.0 525 80.8
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 3.0e-227 792.0 524 80.3
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 5.1e-227 791.2 524 81.1
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 6.7e-227 790.8 524 80.7
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 6.7e-227 790.8 524 80.3
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 8.7e-227 790.4 525 80.6
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 1.5e-226 789.6 524 80.3
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 2.5e-226 788.9 524 80.0
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 3.3e-226 788.5 525 80.4
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 3.3e-226 788.5 524 79.8
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 4.3e-226 788.1 525 80.2
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 5.7e-226 787.7 526 81.4
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 7.4e-226 787.3 524 80.3
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 1.3e-225 786.6 524 79.6
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 1.6e-225 786.2 544 78.9
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 2.2e-225 785.8 524 80.0
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 2.2e-225 785.8 524 80.3
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 2.8e-225 785.4 524 80.9
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 3.7e-225 785.0 524 79.8
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 1.8e-224 782.7 525 79.8
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.8e-224 782.7 524 79.4
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 2.4e-224 782.3 524 79.8
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 2.4e-224 782.3 524 79.8
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 3.1e-224 781.9 524 78.2
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 3.1e-224 781.9 525 80.4
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 3.1e-224 781.9 524 80.5
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 4.1e-224 781.6 524 79.2
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 9.0e-224 780.4 526 79.5
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 9.0e-224 780.4 524 79.6
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.5e-223 779.6 524 79.4
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 2.0e-223 779.2 524 79.6
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 2.6e-223 778.9 524 79.6
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 5.9e-223 777.7 524 78.6
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 5.9e-223 777.7 524 78.4
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 7.7e-223 777.3 525 79.4
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 7.7e-223 777.3 524 78.4
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 7.7e-223 777.3 524 77.9
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.0e-222 776.9 524 78.8
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 1.0e-222 776.9 524 77.9
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 1.0e-222 776.9 524 78.4
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.7e-222 776.2 524 78.2
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 1.7e-222 776.2 524 78.4
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 2.2e-222 775.8 526 80.0
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 2.9e-222 775.4 524 79.8
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 2.9e-222 775.4 524 78.8
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 5.0e-222 774.6 524 79.0
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 8.5e-222 773.9 524 77.9
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.1e-221 773.5 524 78.2
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 1.4e-221 773.1 524 77.3
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.4e-221 773.1 524 78.6
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.9e-221 772.7 524 78.1
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 2.5e-221 772.3 524 78.1
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 3.2e-221 771.9 524 77.9
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 5.5e-221 771.2 525 78.3
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 7.2e-221 770.8 524 79.2
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 1.6e-220 769.6 628 69.1
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 2.1e-220 769.2 581 72.8
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 2.7e-220 768.8 524 77.3
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 6.1e-220 767.7 524 78.2
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 1.4e-219 766.5 524 77.5
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 1.8e-219 766.1 524 78.6
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 3.0e-219 765.4 524 77.1
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 3.0e-219 765.4 524 77.3
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 8.8e-219 763.8 525 77.0
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 3.3e-218 761.9 524 78.4
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 4.3e-218 761.5 524 77.3
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 7.4e-218 760.8 524 77.1
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 7.4e-218 760.8 524 77.1
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 9.7e-218 760.4 524 76.9
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 1.7e-217 759.6 524 76.9
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 1.7e-217 759.6 524 76.9
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 2.2e-217 759.2 524 76.7
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 1.1e-216 756.9 524 76.0
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 1.1e-216 756.9 524 76.3
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.8e-216 756.1 524 76.5
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.8e-216 756.1 524 76.3
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.1e-216 755.4 524 76.9
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 4.1e-216 755.0 525 76.8
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 4.1e-216 755.0 525 77.3
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.2e-215 753.4 593 69.5
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 1.5e-215 753.1 524 76.9
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 3.4e-215 751.9 524 76.5
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.4e-215 751.9 524 76.5
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.4e-215 751.9 524 76.5
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 5.9e-215 751.1 524 76.5
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 2.9e-214 748.8 524 75.4
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 6.5e-214 747.7 525 76.8
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 1.1e-213 746.9 538 74.3
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 5.5e-213 744.6 525 76.8
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 7.2e-213 744.2 525 76.8
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 2.7e-212 742.3 530 76.8
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 5.1e-211 738.0 525 74.9
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 5.1e-211 738.0 494 78.5
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 7.4e-210 734.2 524 75.0
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 7.4e-210 734.2 524 75.0
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 7.4e-210 734.2 524 75.0
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 9.7e-210 733.8 524 74.8
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 1.5e-205 719.9 525 73.3
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 1.9e-205 719.5 526 75.7
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 3.0e-203 712.2 524 74.6
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 3.3e-202 708.8 465 82.2
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.4e-200 703.4 524 71.0
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 4.1e-200 701.8 525 72.0
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 4.5e-199 698.4 526 72.1
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.2e-196 690.3 524 69.8
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 2.1e-196 689.5 524 73.5
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 1.0e-195 687.2 524 71.4
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 2.0e-194 682.9 470 76.8
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 4.1e-176 622.1 427 78.2
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 4.6e-175 618.6 525 66.9
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 3.9e-174 615.5 525 66.1
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 2.2e-169 599.7 531 59.9
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.3e-166 589.7 527 61.7
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.0e-166 589.3 524 63.7
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 1.3e-161 573.9 326 92.3
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 1.7e-161 573.5 467 67.5
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 4.3e-157 558.9 531 56.5
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 1.9e-152 543.5 327 86.9
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 1.2e-151 540.8 409 71.9
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 6.0e-151 538.5 538 56.5
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.6e-148 530.4 326 84.7
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.8e-148 529.6 526 53.2
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 4.0e-147 525.8 535 55.0
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 2.9e-145 519.6 525 58.1
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.6e-135 487.3 523 49.7
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 3.9e-134 482.6 288 88.9
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 6.2e-132 475.3 269 94.8
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.9e-120 437.2 471 56.9
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 2.5e-120 436.8 435 54.3
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.9e-117 427.2 246 91.5
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.7e-116 422.9 306 74.2
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 1.3e-105 387.9 520 45.2
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 4.8e-100 369.4 522 41.4
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 4.7e-95 352.8 438 47.3
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.7e-92 344.4 331 59.5
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.6e-90 337.0 207 86.5
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 1.8e-83 314.3 520 36.9
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 5.5e-80 302.8 199 82.4
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.8e-62 244.6 395 40.0
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 2.3e-62 244.2 147 86.4
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.4e-59 235.0 148 83.1
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.1e-54 217.2 278 45.3
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 3.2e-51 207.2 422 36.5
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 3.3e-48 197.2 117 81.2
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.4e-45 187.2 206 53.4
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 7.1e-43 179.5 199 52.8
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 3.9e-41 173.7 143 69.9
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 8.4e-36 156.0 106 77.4
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 8.1e-31 139.4 119 58.8
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 2.9e-28 131.0 82 84.1
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 9.6e-24 115.9 156 49.4
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 6.0e-18 96.7 53 84.9
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 8.4e-12 76.3 70 60.0
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 1.2e-10 72.4 67 56.7


User provided reference genes

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