Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07542_v3 Cicer arietinum L. HOM05D000347 ORTHO05D008062 1.2e-95 353.2 183 100.0
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 6.1e-76 287.7 184 78.8
Medtr7g059080 Medicago truncatula HOM05D000347 ORTHO05D008062 1.2e-66 256.9 173 74.0
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 1.3e-65 253.4 188 75.0
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 4.9e-65 251.5 184 71.2
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 5.4e-64 248.1 187 73.8
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 1.2e-63 246.9 184 73.4
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 4.6e-63 245.0 183 70.5
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 1.1e-61 240.4 185 69.7
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 4.0e-59 231.9 184 67.9
QL09p044668 Quercus lobata HOM05D000347 ORTHO05D008062 7.8e-47 191.0 184 58.2
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 3.0e-46 189.1 184 58.7
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 4.3e-45 185.3 183 57.9
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 5.6e-45 184.9 183 57.9
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 6.9e-43 177.9 183 56.3
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 9.0e-43 177.6 184 54.9
Prupe.8G205000 Prunus persica HOM05D000347 ORTHO05D000694 1.5e-42 176.8 183 54.1
CSS0034279 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D008062 2.4e-40 169.5 187 52.9
FvH4_2g19360 Fragaria vesca HOM05D000347 ORTHO05D008062 3.2e-40 169.1 184 52.2
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 4.2e-40 168.7 185 52.4
FAN24G2098 Fragaria x ananassa HOM05D000347 ORTHO05D000694 5.4e-40 168.3 184 52.2
CiPaw.03G151400 Carya illinoinensis HOM05D000347 ORTHO05D008062 7.1e-40 167.9 183 54.6
RcHm_v2.0_Chr6g0285151 Rosa chinensis HOM05D000347 ORTHO05D008062 7.1e-40 167.9 184 52.2
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 9.3e-40 167.5 186 53.2
FAN15G1475 Fragaria x ananassa HOM05D000347 ORTHO05D000694 1.6e-39 166.8 184 51.6
MD05G1178500 Malus domestica HOM05D000347 ORTHO05D008062 7.8e-39 164.5 181 53.0
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 3.9e-38 162.2 177 52.0
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 8.7e-38 161.0 185 53.0
FAN27G2014 Fragaria x ananassa HOM05D000347 ORTHO05D008062 8.7e-38 161.0 178 51.1
Sabra02G0183100 Salix brachista HOM05D000347 ORTHO05D008062 8.7e-38 161.0 178 51.1
TAR636G2566 Trochodendron aralioides HOM05D000347 ORTHO05D008062 8.7e-38 161.0 195 46.7
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 3.3e-37 159.1 193 46.1
MD10G1166700 Malus domestica HOM05D000347 ORTHO05D008062 4.3e-37 158.7 183 51.9
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 2.1e-36 156.4 184 57.6
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 3.1e-35 152.5 193 48.7
Lalb_Chr01g0022451 Lupinus albus HOM05D000347 ORTHO05D008062 4.0e-35 152.1 183 50.8
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 9.0e-35 151.0 174 49.4
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 3.4e-34 149.1 184 47.3
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 5.8e-34 148.3 194 46.4
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 7.6e-34 147.9 191 47.1
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 1.7e-33 146.7 187 50.8
Medtr0027s0200 Medicago truncatula HOM05D000347 ORTHO05D008062 2.2e-33 146.4 90 81.1
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 4.9e-33 145.2 186 48.9
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 4.9e-33 145.2 186 48.9
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 6.4e-33 144.8 186 48.9
Actinidia30090 Actinidia chinensis HOM05D000347 ORTHO05D008062 1.4e-32 143.7 184 53.3
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 2.1e-31 139.8 239 41.4
Aqoxy2G03776 Aquilegia oxysepala HOM05D000347 ORTHO05D008062 3.5e-31 139.0 181 44.2
MSTRG.21431 Avicennia marina HOM05D000347 ORTHO05D008062 3.5e-31 139.0 183 47.0
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 6.0e-31 138.3 186 47.8
Oeu018505.1 Olea europaea HOM05D000879 ORTHO05D002043 1.3e-30 137.1 178 43.8
Rhsim13G0044000 Rhododendron simsii HOM05D000347 ORTHO05D008062 1.3e-30 137.1 181 49.2
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 2.3e-30 136.3 192 44.8
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 5.1e-30 135.2 179 46.9
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 8.7e-30 134.4 185 47.0
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 1.1e-29 134.0 189 48.1
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 1.1e-29 134.0 189 48.1
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.9e-29 133.3 208 42.3
arahy.Tifrunner.gnm1.ann1.54FW37 Arachis hypogaea HOM05D000347 ORTHO05D008062 1.6e-28 130.2 196 45.9
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 8.1e-28 127.9 167 50.3
arahy.Tifrunner.gnm1.ann1.W0YDFD Arachis hypogaea HOM05D000347 ORTHO05D008062 1.1e-27 127.5 194 44.8
CsaV3_3G028770 Cucumis sativus L. HOM05D000347 ORTHO05D008062 9.0e-27 124.4 184 44.6
Glyma.16G094000 Glycine max HOM05D000347 ORTHO05D008062 2.0e-26 123.2 169 47.3
Lj3g0009150 Lotus japonicus HOM05D000347 ORTHO05D008062 2.6e-26 122.9 168 50.0
MELO3C018065.2 Cucumis melo HOM05D000347 ORTHO05D008062 7.6e-26 121.3 186 43.0
Nitab4.5_0000866g0010 Nicotiana tabacum HOM05D000347 ORTHO05D008062 9.9e-26 120.9 185 44.3
vmacro02746 Vaccinium macrocarpon HOM05D000347 ORTHO05D008062 1.7e-25 120.2 181 45.9
Sed0024927 Sechium edule HOM05D000901 ORTHO05D008062 2.2e-25 119.8 186 45.2
PGSC0003DMG400003422 Solanum tuberosum HOM05D000347 ORTHO05D008062 2.2e-25 119.8 183 45.4
Lsat_1_v5_gn_5_179760 Lactuca sativa HOM05D000347 ORTHO05D008062 6.4e-25 118.2 190 41.6
AUR62031831 Chenopodium quinoa HOM05D000347 ORTHO05D008062 1.4e-24 117.1 178 44.4
Sed0024241 Sechium edule HOM05D000347 ORTHO05D008062 9.3e-24 114.4 178 45.5
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 2.1e-23 113.2 186 42.5
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 3.5e-23 112.5 187 41.2
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 1.0e-22 110.9 179 40.8
VMungo0331G1006 Vigna mungo HOM05D000347 ORTHO05D008062 5.6e-21 105.1 183 41.5
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 1.6e-20 103.6 179 40.8
Phvul.010G019000 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 8.2e-20 101.3 185 41.6
Haze_24776 Corylus avellana HOM05D000347 ORTHO05D008062 1.8e-19 100.1 93 59.1
DCAR_004713 Daucus carota HOM05D000347 ORTHO05D008062 5.3e-19 98.6 184 40.8
Atru.chr5.2056 Acer truncatum HOM05D000347 ORTHO05D008062 2.6e-18 96.3 113 49.6
Nitab4.5_0003790g0070 Nicotiana tabacum HOM05D000347 ORTHO05D008062 3.4e-18 95.9 113 48.7
AUR62008877 Chenopodium quinoa HOM05D000347 ORTHO05D008062 1.0e-17 94.4 146 43.8
Peaxi162Scf02141g00004 Petunia axillaris HOM05D000347 ORTHO05D008062 3.2e-16 89.4 117 41.9
DCAR_018551 Daucus carota HOM05D000347 ORTHO05D008062 9.3e-16 87.8 182 40.1
Peaxi162Scf00517g00428 Petunia axillaris HOM05D000347 ORTHO05D008062 1.6e-15 87.0 166 37.3
Sc05g0002410 Simmondsia chinensis HOM05D000347 ORTHO05D008062 3.5e-15 85.9 167 41.3
Ah.08g214040 Amaranthus hybridus HOM05D000901 ORTHO05D008062 1.0e-14 84.3 190 38.9
THA.LOC104821644 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 3.9e-14 82.4 184 37.0
Gorai.004G225100 Gossypium raimondii HOM05D000347 ORTHO05D008062 5.1e-14 82.0 170 40.0
Gohir.D08G211800 Gossypium hirsutum HOM05D000347 ORTHO05D008062 6.7e-14 81.6 170 40.0
Phvul.010G019300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 1.5e-13 80.5 178 38.2
Sc24g0003600 Simmondsia chinensis HOM05D000347 ORTHO05D008062 1.9e-13 80.1 124 39.5
Gohir.A08G194000 Gossypium hirsutum HOM05D000347 ORTHO05D008062 3.3e-13 79.3 171 39.2
Carub.0003s2514 Capsella rubella HOM05D011699 ORTHO05D008062 6.3e-12 75.1 156 39.7
Oeu058867.1 Olea europaea HOM05D000347 ORTHO05D008062 8.2e-12 74.7 67 58.2
Nn3g19918 Nelumbo nucifera HOM05D000347 ORTHO05D008062 1.1e-11 74.3 90 43.3
MBI07_g21075_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D008062 2.0e-10 70.1 132 41.7
BcaB06g26692 Brassica carinata HOM05D011699 ORTHO05D008062 2.6e-10 69.7 161 34.2
Thhalv10002691m.g Eutrema salsugineum HOM05D011699 ORTHO05D008062 3.4e-10 69.3 147 40.1
AT3G24750 Arabidopsis thaliana HOM05D011699 ORTHO05D008062 7.7e-10 68.2 149 39.6
AL3G40480 Arabidopsis lyrata HOM05D011699 ORTHO05D008062 2.2e-09 66.6 150 38.7
PSO017G1362 Papaver somniferum HOM05D000347 ORTHO05D008062 8.5e-09 64.7 229 34.1
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 1.1e-08 64.3 91 44.0
A07p07520 Brassica napus HOM05D011699 ORTHO05D008062 3.2e-08 62.8 160 31.9
BraA07t28543Z Brassica rapa HOM05D011699 ORTHO05D008062 3.2e-08 62.8 160 31.9
C07p11290 Brassica napus HOM05D011699 ORTHO05D008062 4.2e-08 62.4 167 32.3
BolC7t41607H Brassica oleracea HOM05D011699 ORTHO05D008062 4.2e-08 62.4 162 33.3
BcaC06g35749 Brassica carinata HOM05D011699 ORTHO05D008062 7.2e-08 61.6 162 33.3
Nitab4.5_0002085g0080 Nicotiana tabacum HOM05D000347 ORTHO05D008062 9.4e-08 61.2 180 28.9
PSO063G6109 Papaver somniferum HOM05D000347 ORTHO05D008062 1.0e-06 57.8 229 33.2
SalBow2G2623 Salvia bowleyana HOM05D000347 ORTHO05D008062 6.7e-06 55.1 181 32.6
THA.LOC104804603 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 6.7e-06 55.1 180 31.7
Zm00001eb379630 Zea mays HOM05D042818 ORTHO05D008062 6.7e-06 55.1 191 31.9


User provided reference genes

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