Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 2.6e-68 261.9 134 100.0
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 7.0e-53 210.7 134 82.1
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 5.4e-45 184.5 107 87.9
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 7.0e-45 184.1 134 72.4
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 3.5e-44 181.8 134 71.6
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 4.4e-39 164.9 134 63.4
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 5.7e-39 164.5 134 63.4
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 4.1e-37 158.3 103 75.7
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 2.1e-33 146.0 105 74.3
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 2.2e-30 136.0 134 55.2
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 6.4e-30 134.4 116 57.8
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 6.4e-30 134.4 131 52.7
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 8.3e-30 134.0 126 56.3
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 1.0e-27 127.1 133 48.1
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 8.6e-27 124.0 130 55.4
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 8.6e-27 124.0 128 48.4
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 8.6e-27 124.0 136 50.7
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 1.1e-26 123.6 105 68.6
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 1.5e-26 123.2 125 55.2
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 5.6e-26 121.3 138 53.6
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 9.5e-26 120.6 127 50.4
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 1.2e-25 120.2 127 49.6
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 2.1e-25 119.4 94 60.6
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 2.1e-25 119.4 94 60.6
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 2.8e-25 119.0 92 59.8
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 8.1e-25 117.5 133 48.1
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 1.1e-24 117.1 120 48.3
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 1.1e-24 117.1 117 50.4
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 1.1e-24 117.1 111 53.2
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 1.4e-24 116.7 127 48.8
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 1.8e-24 116.3 87 59.8
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 1.8e-24 116.3 134 46.3
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 2.6e-23 112.5 87 57.5
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 2.6e-23 112.5 125 52.0
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 9.8e-23 110.5 103 50.5
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 1.7e-22 109.8 132 49.2
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 1.7e-22 109.8 110 49.1
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 1.7e-22 109.8 103 51.5
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 2.2e-22 109.4 130 45.4
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 4.9e-22 108.2 138 43.5
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 4.9e-22 108.2 91 54.9
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 1.1e-21 107.1 98 54.1
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 1.9e-21 106.3 105 50.5
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 2.4e-21 105.9 72 68.1
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 5.4e-21 104.8 129 45.7
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 9.2e-21 104.0 96 47.9
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 1.2e-20 103.6 124 42.7
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 1.2e-20 103.6 134 42.5
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 3.5e-20 102.1 106 47.2
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 4.6e-20 101.7 86 52.3
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 4.6e-20 101.7 86 52.3
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 4.6e-20 101.7 86 54.7
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 7.8e-20 100.9 91 51.6
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 7.8e-20 100.9 103 47.6
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 6.6e-19 97.8 65 66.2
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 8.6e-19 97.4 67 67.2
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 8.6e-19 97.4 90 50.0
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 1.9e-18 96.3 73 63.0
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 3.3e-18 95.5 57 73.7
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 5.6e-18 94.7 57 73.7
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 5.6e-18 94.7 127 40.2
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 7.3e-18 94.4 67 65.7
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 7.3e-18 94.4 67 65.7
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 1.6e-17 93.2 56 71.4
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 4.7e-17 91.7 54 72.2
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 4.7e-17 91.7 56 69.6
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 1.1e-16 90.5 70 54.3
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 1.4e-16 90.1 53 69.8
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 1.8e-16 89.7 57 68.4
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 4.0e-16 88.6 106 43.4
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 4.0e-16 88.6 70 54.3
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 1.5e-15 86.7 64 65.6
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 1.5e-15 86.7 72 58.3
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 3.4e-15 85.5 49 81.6
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 1.4e-13 80.1 61 54.1
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 1.9e-13 79.7 78 44.9
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 1.6e-12 76.6 95 43.2
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 1.7e-11 73.2 115 36.5
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 5.1e-11 71.6 103 39.8
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 1.9e-10 69.7 36 86.1
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 1.2e-09 67.0 173 31.8
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 2.8e-09 65.9 75 41.3
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 6.2e-09 64.7 34 76.5
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 1.4e-08 63.5 40 65.0
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 1.4e-08 63.5 40 65.0
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 4.0e-08 62.0 83 37.3
CsaV3_5G039910 Cucumis sativus L. HOM05D007718 ORTHO05D009752 8.4e-06 54.3 87 35.6


User provided reference genes

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