Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 8.9e-84 313.5 156 100.0
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 1.1e-73 280.0 156 89.1
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 1.1e-73 280.0 156 86.5
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 1.4e-68 263.1 156 83.3
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 5.4e-65 251.1 161 78.3
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 3.0e-63 245.4 166 75.3
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 1.1e-62 243.4 166 74.1
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 1.9e-62 242.7 160 74.4
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 2.8e-61 238.8 164 70.1
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 8.1e-61 237.3 158 74.7
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 2.0e-59 232.6 164 68.9
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 3.8e-58 228.4 161 70.8
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 4.9e-58 228.0 161 70.8
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 3.0e-55 218.8 155 70.3
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 5.6e-54 214.5 158 67.7
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 5.6e-54 214.5 153 69.9
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 1.6e-53 213.0 159 66.7
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.1e-53 212.6 157 68.2
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 2.8e-53 212.2 157 67.5
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.8e-53 212.2 153 69.3
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 3.7e-53 211.8 160 64.4
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 6.2e-53 211.1 156 66.7
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 1.1e-52 210.3 153 67.3
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 2.4e-52 209.1 161 64.6
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 3.1e-52 208.8 161 65.2
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 4.0e-52 208.4 154 67.5
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 4.0e-52 208.4 158 66.5
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 6.9e-52 207.6 150 67.3
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 6.9e-52 207.6 161 63.4
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 9.0e-52 207.2 155 66.5
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 1.2e-51 206.8 158 69.0
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 1.2e-51 206.8 157 66.2
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.5e-51 206.5 158 69.0
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.5e-51 206.5 161 65.2
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.5e-51 206.5 156 67.3
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 1.5e-51 206.5 155 65.8
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 2.0e-51 206.1 153 64.7
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 2.0e-51 206.1 158 65.8
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 3.4e-51 205.3 150 68.0
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 3.4e-51 205.3 150 68.0
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 4.5e-51 204.9 161 64.6
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 4.5e-51 204.9 162 63.0
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 4.5e-51 204.9 161 64.6
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 4.5e-51 204.9 163 62.6
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 4.5e-51 204.9 131 71.8
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 5.8e-51 204.5 151 66.9
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 5.8e-51 204.5 153 66.0
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 7.6e-51 204.1 159 63.5
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 9.9e-51 203.8 150 66.7
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 9.9e-51 203.8 157 64.3
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.3e-50 203.4 155 64.5
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.3e-50 203.4 157 65.6
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.7e-50 203.0 150 66.7
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 1.7e-50 203.0 156 65.4
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.7e-50 203.0 153 65.4
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 1.7e-50 203.0 118 78.0
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 1.7e-50 203.0 118 78.0
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 2.2e-50 202.6 154 66.9
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 2.9e-50 202.2 154 66.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 2.9e-50 202.2 155 64.5
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 2.9e-50 202.2 164 63.4
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 3.8e-50 201.8 153 64.7
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 3.8e-50 201.8 118 77.1
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 6.4e-50 201.1 160 62.5
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 8.4e-50 200.7 130 71.5
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 8.4e-50 200.7 154 64.3
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 1.1e-49 200.3 154 66.2
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 1.4e-49 199.9 154 60.4
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 1.4e-49 199.9 162 61.1
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 1.4e-49 199.9 158 63.3
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.9e-49 199.5 159 63.5
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 1.9e-49 199.5 157 61.1
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 2.4e-49 199.1 161 61.5
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 3.2e-49 198.7 163 62.6
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 4.2e-49 198.4 155 61.9
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 5.5e-49 198.0 159 62.9
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 7.1e-49 197.6 154 64.9
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 7.1e-49 197.6 155 61.9
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 9.3e-49 197.2 150 66.0
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 9.3e-49 197.2 150 66.0
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 9.3e-49 197.2 154 63.6
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 2.7e-48 195.7 160 60.6
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 2.7e-48 195.7 147 64.6
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.5e-48 195.3 157 61.8
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.5e-48 195.3 157 61.8
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 4.6e-48 194.9 165 60.0
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 6.0e-48 194.5 150 63.3
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 6.0e-48 194.5 150 65.3
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 6.0e-48 194.5 165 59.4
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 7.9e-48 194.1 151 61.6
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 7.9e-48 194.1 155 61.9
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.0e-47 193.7 157 61.1
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 1.3e-47 193.4 153 62.7
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 2.3e-47 192.6 157 61.1
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.3e-47 192.6 163 58.9
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.3e-47 192.6 163 58.9
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 3.9e-47 191.8 152 63.8
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 3.9e-47 191.8 157 61.1
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 6.7e-47 191.0 162 61.1
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 1.1e-46 190.3 161 59.0
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 4.3e-46 188.3 163 58.9
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 2.4e-44 182.6 154 59.7
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 3.1e-44 182.2 140 66.4
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 4.0e-44 181.8 156 60.3
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 1.7e-42 176.4 116 69.8
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 7.1e-41 171.0 163 55.8
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 1.3e-39 166.8 149 59.1
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 1.8e-39 166.4 129 62.8
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 3.3e-38 162.2 151 54.3
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.9e-36 154.5 118 65.3
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 3.4e-35 152.1 119 55.5
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 1.1e-30 137.1 159 44.7
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 1.8e-28 129.8 74 71.6
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.2e-27 127.1 149 44.3
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 7.7e-27 124.4 82 70.7
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 5.5e-25 118.2 92 63.0
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 7.2e-25 117.9 101 59.4
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 7.2e-25 117.9 89 64.0
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 4.7e-16 88.6 122 39.3
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 8.0e-16 87.8 59 66.1
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 2.2e-13 79.7 51 70.6
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 4.8e-13 78.6 51 72.5
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 3.1e-12 75.9 122 32.8
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 2.9e-10 69.3 131 33.6
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 5.5e-09 65.1 164 36.6


User provided reference genes

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