Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 3.0e-53 211.5 97 100.0
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 1.6e-51 205.7 97 93.8
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 6.2e-51 203.8 97 92.8
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 1.8e-50 202.2 96 92.7
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 8.9e-50 199.9 97 91.8
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 1.5e-49 199.1 96 91.7
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 2.9e-48 194.9 97 90.7
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.6e-46 189.1 97 85.6
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 2.1e-46 188.7 97 86.6
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 2.7e-46 188.3 97 84.5
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 4.6e-46 187.6 93 88.2
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 1.7e-45 185.7 97 84.5
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 3.9e-45 184.5 94 86.2
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 6.6e-45 183.7 94 84.0
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 1.5e-44 182.6 97 81.4
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 3.3e-44 181.4 97 81.4
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 3.3e-44 181.4 119 71.4
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 4.3e-44 181.0 95 83.2
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.3e-44 181.0 93 84.9
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 4.3e-44 181.0 93 84.9
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 4.3e-44 181.0 93 84.9
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 9.6e-44 179.9 95 80.0
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 9.6e-44 179.9 95 83.2
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.2e-43 179.5 95 80.0
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.2e-43 179.5 93 83.9
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 1.6e-43 179.1 93 81.7
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 1.6e-43 179.1 93 83.9
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 2.8e-43 178.3 93 82.8
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 2.8e-43 178.3 93 82.8
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 3.6e-43 177.9 93 83.9
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 3.6e-43 177.9 93 83.9
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 3.6e-43 177.9 95 81.1
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 6.2e-43 177.2 92 82.6
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 6.2e-43 177.2 92 82.6
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 8.1e-43 176.8 95 77.9
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 1.1e-42 176.4 95 81.1
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 1.1e-42 176.4 92 81.5
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.4e-42 176.0 93 83.9
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.4e-42 176.0 93 79.6
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.4e-42 176.0 93 79.6
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 2.4e-42 175.3 92 80.4
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 2.4e-42 175.3 92 79.3
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 2.4e-42 175.3 92 79.3
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 2.4e-42 175.3 92 79.3
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 3.1e-42 174.9 93 81.7
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 5.2e-42 174.1 95 77.9
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 5.2e-42 174.1 93 81.7
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.2e-42 174.1 95 77.9
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 5.2e-42 174.1 95 77.9
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 9.0e-42 173.3 90 83.3
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 1.2e-41 172.9 93 80.6
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 1.2e-41 172.9 92 81.5
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 1.2e-41 172.9 92 79.3
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 1.5e-41 172.6 94 75.5
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.5e-41 172.6 91 82.4
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 2.0e-41 172.2 90 83.3
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 2.6e-41 171.8 91 82.4
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 3.4e-41 171.4 92 78.3
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 3.4e-41 171.4 93 80.6
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 5.8e-41 170.6 93 77.4
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 7.6e-41 170.2 92 78.3
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 9.9e-41 169.9 94 74.5
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 9.9e-41 169.9 95 75.8
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 2.2e-40 168.7 95 74.7
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 2.9e-40 168.3 91 75.8
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 3.8e-40 167.9 93 78.5
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 4.9e-40 167.5 90 78.9
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 6.4e-40 167.2 92 78.3
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 6.4e-40 167.2 93 78.5
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 6.4e-40 167.2 93 78.5
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 8.4e-40 166.8 90 80.0
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 1.1e-39 166.4 115 65.2
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 1.4e-39 166.0 95 73.7
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 1.4e-39 166.0 95 73.7
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 1.4e-39 166.0 86 81.4
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.9e-39 165.6 91 75.8
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 1.9e-39 165.6 91 75.8
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 2.4e-39 165.2 95 73.7
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 7.1e-39 163.7 92 75.0
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 7.1e-39 163.7 93 76.3
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 9.3e-39 163.3 91 79.1
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 1.2e-38 162.9 88 78.4
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 1.2e-38 162.9 92 75.0
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 2.1e-38 162.2 88 79.5
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 2.1e-38 162.2 95 74.7
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 2.7e-38 161.8 92 72.8
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 3.5e-38 161.4 92 73.9
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 3.5e-38 161.4 92 73.9
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 3.5e-38 161.4 91 75.8
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 3.5e-38 161.4 92 75.0
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 4.6e-38 161.0 94 72.3
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 6.0e-38 160.6 86 80.2
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 6.0e-38 160.6 99 69.7
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 7.8e-38 160.2 90 77.8
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 7.8e-38 160.2 90 77.8
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 2.3e-37 158.7 88 76.1
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 3.0e-37 158.3 92 76.1
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 5.1e-37 157.5 87 73.6
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 5.1e-37 157.5 87 73.6
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 6.6e-37 157.1 93 73.1
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 8.7e-37 156.8 87 75.9
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 1.5e-36 156.0 95 71.6
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.5e-36 156.0 91 75.8
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.9e-36 155.6 81 84.0
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 1.9e-36 155.6 93 74.2
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 5.6e-36 154.1 90 73.3
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 7.3e-36 153.7 91 72.5
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 2.1e-35 152.1 87 77.0
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 8.1e-35 150.2 78 79.5
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 1.1e-34 149.8 91 70.3
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.1e-34 149.8 91 70.3
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.1e-34 149.8 104 67.3
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.1e-34 149.8 213 41.8
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 1.4e-34 149.4 91 70.3
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 1.8e-34 149.1 89 70.8
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 1.8e-34 149.1 89 70.8
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 1.8e-34 149.1 89 70.8
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 4.0e-34 147.9 89 69.7
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 4.0e-34 147.9 89 69.7
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 4.0e-34 147.9 89 69.7
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 4.0e-34 147.9 89 69.7
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 4.0e-34 147.9 89 69.7
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 6.9e-34 147.1 89 70.8
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 4.5e-33 144.4 89 69.7
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 7.1e-31 137.1 80 75.0
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 9.3e-31 136.7 78 76.9
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 2.1e-30 135.6 89 68.5
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 3.0e-29 131.7 69 84.1
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 5.1e-29 131.0 74 75.7
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 1.6e-27 125.9 61 95.1
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 9.9e-25 116.7 64 73.4
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.9e-23 112.5 68 72.1
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.3e-21 106.3 61 75.4
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.1e-20 103.2 74 60.8
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 1.9e-15 85.9 67 55.2
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 1.6e-14 82.8 66 51.5
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 7.9e-14 80.5 61 63.9
Haze_25902 Corylus avellana HOM05D001256 ORTHO05D001141 5.9e-09 64.3 39 61.5
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 1.4e-07 59.7 57 45.6


User provided reference genes

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