Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07396_v3 Cicer arietinum L. HOM05D008716 ORTHO05D010396 3.9e-44 181.0 87 100.0
TPR.G26813 Trifolium pratense HOM05D008716 ORTHO05D010396 3.4e-40 167.9 87 92.0
Psat3g151280 Pisum sativum HOM05D008716 ORTHO05D010396 4.4e-40 167.5 87 94.3
Medtr7g052240 Medicago truncatula HOM05D008716 ORTHO05D010396 2.9e-39 164.9 88 92.0
Glyma.08G344900 Glycine max HOM05D008716 ORTHO05D010396 3.5e-37 157.9 88 86.4
Phvul.008G137500 Phaseolus vulgaris HOM05D008716 ORTHO05D010396 6.0e-37 157.1 87 85.1
Lj1g0004683 Lotus japonicus HOM05D008716 ORTHO05D010396 7.8e-37 156.8 82 89.0
VMungo1383G3111 Vigna mungo HOM05D008716 ORTHO05D010396 5.0e-36 154.1 87 83.9
Lalb_Chr01g0022011 Lupinus albus HOM05D008716 ORTHO05D010396 5.4e-30 134.0 87 75.9
RcHm_v2.0_Chr6g0283141 Rosa chinensis HOM05D008716 ORTHO05D010396 1.0e-28 129.8 88 69.3
Manes.12G052800 Manihot esculenta HOM05D008716 ORTHO05D010396 2.3e-28 128.6 88 73.9
Hma1.2p1_0161F.1_g071310 Hydrangea macrophylla HOM05D008716 ORTHO05D010396 1.9e-27 125.6 88 68.2
Thecc.01G212000 Theobroma cacao HOM05D008716 ORTHO05D010396 3.3e-27 124.8 90 73.3
Prupe.8G191500 Prunus persica HOM05D008716 ORTHO05D010396 9.5e-27 123.2 86 70.9
Potri.002G250100 Populus trichocarpa HOM05D008716 ORTHO05D010396 1.2e-26 122.9 88 71.6
Eucgr.K02092 Eucalyptus grandis HOM05D008716 ORTHO05D010396 2.1e-26 122.1 88 69.3
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.1e-25 118.2 85 67.1
Nitab4.5_0000038g0060 Nicotiana tabacum HOM05D008716 ORTHO05D010396 8.9e-25 116.7 87 66.7
Cc01_g16240 Coffea canephora HOM05D008716 ORTHO05D010396 4.4e-24 114.4 88 63.6
Gohir.A11G142000 Gossypium hirsutum HOM05D008716 ORTHO05D010396 4.9e-23 110.9 90 70.0
QL09p045905 Quercus lobata HOM05D008716 ORTHO05D010396 4.9e-23 110.9 88 67.0
CANSAT01G0992 Cannabis sativa HOM05D008716 ORTHO05D010396 6.4e-23 110.5 86 64.0
Gorai.007G159000 Gossypium raimondii HOM05D008716 ORTHO05D010396 1.1e-22 109.8 90 68.9
Gohir.D07G095100 Gossypium hirsutum HOM05D008716 ORTHO05D010396 1.4e-22 109.4 89 64.0
Gohir.D11G148300 Gossypium hirsutum HOM05D008716 ORTHO05D010396 9.2e-22 106.7 90 67.8
Ciclev10033963m.g Citrus clementina HOM05D008716 ORTHO05D010396 7.8e-21 103.6 75 74.7
Migut.N00660 Erythranthe guttata HOM05D008716 ORTHO05D010396 6.6e-20 100.5 89 57.3
Duzib133G0923 Durio zibethinus HOM05D008716 ORTHO05D010396 8.6e-20 100.1 89 66.3
Sed0019156 Sechium edule HOM05D008716 ORTHO05D010396 1.5e-19 99.4 85 63.5
Gorai.001G102400 Gossypium raimondii HOM05D008716 ORTHO05D010396 1.9e-19 99.0 83 63.9
Cfa014542 Carpinus fangiana HOM05D008716 ORTHO05D010396 9.5e-19 96.7 85 67.1
Lsat_1_v5_gn_9_16200 Lactuca sativa HOM05D008716 ORTHO05D010396 1.2e-18 96.3 88 55.7
Haze_13082 Corylus avellana HOM05D008716 ORTHO05D010396 1.6e-18 95.9 89 65.2
MELO3C021138.2 Cucumis melo HOM05D008716 ORTHO05D010396 1.6e-18 95.9 85 63.5
Haze_13081 Corylus avellana HOM05D008716 ORTHO05D010396 2.4e-17 92.0 87 63.2
CiPaw.13G054500 Carya illinoinensis HOM05D008716 ORTHO05D010396 3.1e-17 91.7 91 61.5
SalBow3G3739 Salvia bowleyana HOM05D008716 ORTHO05D010396 2.6e-16 88.6 86 57.0
Migut.D00724 Erythranthe guttata HOM05D008716 ORTHO05D010396 1.2e-13 79.7 76 55.3
Lsat_1_v5_gn_5_178421 Lactuca sativa HOM05D008716 ORTHO05D010396 1.2e-13 79.7 87 52.9
Nn1g08284 Nelumbo nucifera HOM05D008716 ORTHO05D010396 2.7e-13 78.6 85 49.4
THA.LOC104822469 Tarenaya hassleriana HOM05D010897 ORTHO05D010396 1.5e-11 72.8 81 53.1
Sopen06g034510 Solanum pennellii HOM05D008716 ORTHO05D010396 2.5e-11 72.0 89 52.8
Solyc06g083120.1 Solanum lycopersicum HOM05D008716 ORTHO05D010396 2.1e-10 68.9 89 50.6
A03p35250 Brassica napus HOM05D010897 ORTHO05D010396 2.8e-10 68.6 92 43.5
Thhalv10021826m.g Eutrema salsugineum HOM05D010897 ORTHO05D010396 3.6e-10 68.2 90 45.6
Sp3g06350 Schrenkiella parvula HOM05D010897 ORTHO05D010396 3.6e-10 68.2 90 44.4
BcaB03g14702 Brassica carinata HOM05D010897 ORTHO05D010396 6.2e-10 67.4 90 44.4
BraA05t22807Z Brassica rapa HOM05D010897 ORTHO05D010396 8.1e-10 67.0 92 42.4
BcaC01g04283 Brassica carinata HOM05D010897 ORTHO05D010396 1.1e-09 66.6 92 42.4
C03p42870 Brassica napus HOM05D010897 ORTHO05D010396 1.1e-09 66.6 92 42.4
BolC3t16555H Brassica oleracea HOM05D010897 ORTHO05D010396 1.1e-09 66.6 92 42.4
BraA03t12703Z Brassica rapa HOM05D010897 ORTHO05D010396 1.1e-09 66.6 92 42.4
AL3G18730 Arabidopsis lyrata HOM05D010897 ORTHO05D010396 1.4e-09 66.2 78 47.4
A05p40760 Brassica napus HOM05D010897 ORTHO05D010396 1.8e-09 65.9 92 41.3
Aa31LG5G18000 Aethionema arabicum HOM05D010897 ORTHO05D010396 4.0e-09 64.7 74 48.6
C05p59870 Brassica napus HOM05D010897 ORTHO05D010396 5.3e-09 64.3 92 41.3
BolC5t34641H Brassica oleracea HOM05D010897 ORTHO05D010396 5.3e-09 64.3 92 41.3
CARHR082070 Cardamine hirsuta HOM05D010897 ORTHO05D010396 5.3e-09 64.3 81 46.9
AT3G07425 Arabidopsis thaliana HOM05D010897 ORTHO05D010396 6.9e-09 63.9 78 46.2
BcaC05g29535 Brassica carinata HOM05D010897 ORTHO05D010396 6.9e-09 63.9 84 44.0
Carub.0003s0697 Capsella rubella HOM05D010897 ORTHO05D010396 6.9e-09 63.9 81 46.9


User provided reference genes

Program Settings