Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 2.4e-223 778.5 376 100.0
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 5.0e-173 611.3 359 84.1
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 2.6e-169 599.0 357 83.2
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 3.5e-166 588.6 358 81.8
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 6.3e-160 567.8 360 78.9
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 8.0e-155 550.8 358 77.1
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 4.5e-150 535.0 383 72.1
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 2.9e-149 532.3 359 74.9
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 2.8e-147 525.8 359 73.3
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.0e-146 523.9 359 72.7
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 2.7e-126 456.1 365 63.3
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.5e-126 455.7 370 63.5
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.1e-124 450.7 372 63.2
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 2.3e-122 443.0 368 62.5
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 4.0e-122 442.2 367 60.8
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.2e-121 440.7 395 58.7
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 2.6e-121 439.5 358 62.6
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 4.4e-121 438.7 368 62.2
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 7.6e-121 438.0 373 62.2
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.9e-120 436.0 368 61.4
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 3.7e-120 435.6 361 61.8
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.1e-119 434.1 369 61.0
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.9e-119 433.3 387 58.1
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 5.4e-119 431.8 447 53.7
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 2.1e-118 429.9 367 60.8
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 2.7e-118 429.5 369 59.9
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 3.9e-117 425.6 367 61.3
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 1.1e-116 424.1 409 55.5
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.5e-116 423.7 379 60.4
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 2.5e-116 422.9 346 62.7
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 2.5e-116 422.9 373 59.8
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 9.6e-116 421.0 401 55.4
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 9.6e-116 421.0 364 60.2
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 8.1e-115 417.9 402 55.0
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 4.0e-114 415.6 357 61.6
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.2e-113 414.1 307 68.7
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.5e-113 413.7 370 60.5
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.5e-113 413.7 274 77.7
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 5.8e-113 411.8 362 58.8
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 7.6e-113 411.4 368 59.5
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 1.3e-112 410.6 261 74.3
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 2.9e-112 409.5 260 74.6
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 3.8e-112 409.1 384 59.1
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 4.9e-112 408.7 373 57.1
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 4.9e-112 408.7 345 61.2
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 8.4e-112 407.9 396 55.1
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 8.4e-112 407.9 374 56.7
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 1.4e-111 407.1 446 50.2
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 1.9e-111 406.8 447 50.8
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 1.9e-111 406.8 376 58.5
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.4e-111 406.4 369 58.8
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 1.6e-110 403.7 414 53.9
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.6e-110 403.7 372 59.1
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 6.0e-110 401.7 358 58.4
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 7.8e-110 401.4 272 68.8
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 1.7e-109 400.2 301 65.1
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 2.3e-109 399.8 375 58.1
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.1e-108 397.5 377 56.8
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 1.9e-108 396.7 249 74.3
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 3.6e-107 392.5 335 60.9
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.1e-106 391.0 370 57.8
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.4e-106 390.6 319 60.2
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 7.6e-105 384.8 312 61.9
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 3.8e-104 382.5 307 61.9
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 3.8e-104 382.5 388 52.8
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 8.4e-104 381.3 388 52.8
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 1.1e-103 380.9 249 71.9
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 1.9e-103 380.2 354 56.8
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 2.4e-103 379.8 406 51.5
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 2.4e-103 379.8 406 51.5
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 2.4e-103 379.8 366 55.2
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 7.1e-103 378.3 333 58.9
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 9.3e-103 377.9 387 54.8
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 2.7e-102 376.3 338 55.6
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 3.5e-102 375.9 333 58.9
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 6.0e-102 375.2 411 51.1
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 4.0e-98 362.5 378 51.3
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 3.2e-95 352.8 375 50.7
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.1e-92 344.4 381 48.3
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 4.3e-92 342.4 393 49.6
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 6.9e-90 335.1 354 52.0
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 1.5e-89 334.0 409 48.9
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 2.0e-89 333.6 380 47.1
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 1.3e-88 330.9 255 62.7
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 4.5e-81 305.8 282 58.9
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 5.9e-81 305.4 374 46.5
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 9.3e-79 298.1 297 50.5
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.5e-76 290.0 172 78.5
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 1.3e-75 287.7 341 51.6
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 4.8e-75 285.8 182 75.8
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 5.5e-71 272.3 251 54.6
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 2.5e-68 263.5 271 54.6
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 6.9e-66 255.4 291 50.5
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 2.6e-65 253.4 280 51.8
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 4.2e-63 246.1 365 41.4
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 7.2e-63 245.4 255 51.0
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.2e-59 233.8 350 44.0
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 1.2e-54 218.0 183 55.7
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.2e-54 218.0 152 65.8
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 1.3e-51 208.0 178 60.7
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 3.8e-48 196.4 282 42.6
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 6.5e-48 195.7 113 77.0
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 1.2e-46 191.4 247 42.1
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 1.0e-40 171.8 91 86.8
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 4.4e-36 156.4 87 78.2
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.1e-34 151.8 228 43.4
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 4.3e-31 139.8 123 59.3
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 7.3e-31 139.0 84 71.4
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 3.4e-28 130.2 282 31.2
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.2e-27 127.5 331 30.5
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.6e-25 121.3 134 45.5
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 3.3e-23 113.6 229 38.9
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.0e-21 106.7 84 56.0
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.9e-18 97.8 146 43.8
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 4.1e-10 70.1 58 53.4
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.2e-09 68.6 135 36.3
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 1.3e-08 65.1 47 57.4
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 4.7e-06 56.6 155 29.7


User provided reference genes

Program Settings