Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 8.6e-186 653.7 369 100.0
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 2.2e-80 303.5 455 45.7
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 2.4e-71 273.5 455 43.3
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 3.3e-60 236.5 396 42.9
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 3.2e-47 193.4 462 36.8
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.1e-39 168.3 467 33.2
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 3.5e-38 163.3 425 32.9
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.1e-36 158.3 403 35.2
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 9.0e-34 148.7 445 34.4
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 2.2e-32 144.1 447 32.7
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 1.9e-28 131.0 379 32.2
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 1.5e-20 104.8 192 38.0
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 6.9e-18 95.9 190 36.8
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.6e-17 94.0 164 39.0
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 7.6e-17 92.4 189 33.3
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 1.7e-16 91.3 191 36.1
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 1.7e-16 91.3 201 35.8
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 5.0e-16 89.7 166 39.8
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.4e-15 88.2 184 35.9
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 3.2e-15 87.0 168 34.5
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.2e-15 86.7 176 34.1
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.2e-15 86.7 168 33.9
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 7.1e-15 85.9 168 36.3
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 1.6e-14 84.7 197 34.0
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 2.7e-14 84.0 190 34.7
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 3.5e-14 83.6 165 34.5
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 6.1e-14 82.8 223 30.5
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 6.1e-14 82.8 172 33.1
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 2.3e-13 80.9 195 33.3
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 3.0e-13 80.5 191 30.4
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 3.9e-13 80.1 193 30.6
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 5.1e-13 79.7 167 35.3
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 5.1e-13 79.7 194 30.4
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 6.7e-13 79.3 194 30.9
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 8.7e-13 79.0 250 28.0
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 1.1e-12 78.6 195 30.8
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 3.3e-12 77.0 267 24.7
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 9.7e-12 75.5 165 33.9
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 1.3e-11 75.1 124 40.3
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 1.6e-11 74.7 203 32.5
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 1.6e-11 74.7 194 29.4
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 1.6e-11 74.7 191 29.3
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 2.2e-11 74.3 192 29.7
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 3.7e-11 73.6 167 31.1
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 8.2e-11 72.4 190 27.9
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.1e-10 72.0 170 31.2
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 1.4e-10 71.6 169 33.1
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 5.3e-10 69.7 170 30.6
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 1.5e-09 68.2 135 36.3
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 2.0e-09 67.8 100 42.0
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 2.6e-09 67.4 186 29.6
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 5.9e-09 66.2 183 29.0
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 7.7e-09 65.9 195 24.1
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 7.7e-09 65.9 190 28.9
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 1.3e-08 65.1 172 27.3
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 1.3e-08 65.1 130 37.7
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 1.3e-08 65.1 164 29.3
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 1.7e-08 64.7 195 23.6
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 2.2e-08 64.3 192 32.3
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 2.2e-08 64.3 140 30.0
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 2.9e-08 63.9 167 29.3
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 3.8e-08 63.5 151 33.1
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 6.5e-08 62.8 197 26.4
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 8.5e-08 62.4 194 26.3
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 1.1e-07 62.0 183 30.1
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 1.1e-07 62.0 195 23.6
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 1.1e-07 62.0 189 33.3
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 1.1e-07 62.0 146 32.9
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 1.4e-07 61.6 195 24.6
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 1.4e-07 61.6 194 23.7
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 1.9e-07 61.2 196 28.1
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 3.2e-07 60.5 184 27.2
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 7.2e-07 59.3 137 32.8
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 7.2e-07 59.3 174 28.7
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 9.4e-07 58.9 196 26.0
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 9.4e-07 58.9 183 27.9
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 1.6e-06 58.2 168 31.0
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 3.6e-06 57.0 122 34.4
Glyma.20G061700 Glycine max HOM05D007164 ORTHO05D008802 4.6e-06 56.6 272 29.0
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 7.9e-06 55.8 195 26.7


User provided reference genes

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