Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.6e-208 729.2 360 100.0
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 1.6e-208 729.2 360 100.0
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 3.9e-183 644.8 365 89.3
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 3.6e-181 638.3 361 88.1
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 1.1e-177 626.7 346 89.9
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 3.0e-175 618.6 361 85.9
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 2.8e-173 612.1 363 85.1
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 3.1e-172 608.6 361 84.2
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 1.7e-170 602.8 374 82.1
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 1.7e-170 602.8 374 82.1
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.1e-169 600.1 331 89.7
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 2.5e-169 599.0 370 81.4
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 4.5e-163 578.2 361 80.6
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 6.1e-152 541.2 363 75.5
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 3.0e-151 538.9 363 76.9
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 5.1e-151 538.1 363 77.1
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 1.1e-150 537.0 362 75.4
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 1.1e-150 537.0 364 75.3
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 9.7e-150 533.9 360 76.1
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 1.7e-149 533.1 365 75.9
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 2.2e-149 532.7 360 75.6
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 3.7e-149 531.9 361 74.8
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.4e-148 530.0 363 73.6
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 2.4e-148 529.3 362 74.6
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 1.2e-147 526.9 363 74.9
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 1.5e-147 526.6 364 73.4
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.5e-147 526.6 364 73.4
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.5e-147 526.6 365 72.9
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 3.4e-147 525.4 365 74.2
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 1.3e-146 523.5 360 75.6
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 5.0e-146 521.5 360 73.1
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 3.2e-145 518.8 373 71.3
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 1.6e-144 516.5 370 71.6
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 1.6e-144 516.5 360 73.6
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 2.7e-144 515.8 360 73.1
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 2.3e-143 512.7 362 72.4
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 2.3e-143 512.7 365 74.2
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 3.9e-143 511.9 359 72.4
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 6.7e-143 511.1 362 73.5
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 3.3e-142 508.8 360 71.4
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 4.4e-142 508.4 359 72.1
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.4e-142 507.7 362 71.8
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 9.7e-142 507.3 360 71.1
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 1.7e-141 506.5 359 72.1
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 2.2e-141 506.1 368 69.8
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 8.2e-141 504.2 361 71.5
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 1.1e-140 503.8 360 71.1
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 3.1e-140 502.3 363 71.9
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 4.1e-140 501.9 362 71.3
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.5e-139 500.0 365 71.0
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 2.6e-139 499.2 370 68.6
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.5e-139 498.8 333 75.4
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 3.5e-139 498.8 361 69.0
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 3.5e-139 498.8 363 70.8
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 1.0e-138 497.3 370 68.1
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 1.0e-138 497.3 369 70.5
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.7e-138 496.5 367 69.8
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 2.9e-138 495.7 373 67.8
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 5.0e-138 495.0 367 68.1
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 6.5e-138 494.6 369 68.0
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 8.5e-138 494.2 366 68.3
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 1.1e-137 493.8 365 70.1
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 1.1e-137 493.8 362 68.2
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 4.2e-137 491.9 369 67.8
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 9.4e-137 490.7 365 67.1
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 9.4e-137 490.7 361 70.6
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 3.6e-136 488.8 360 69.2
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 2.3e-135 486.1 365 67.9
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 2.3e-135 486.1 366 71.3
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 3.0e-135 485.7 365 67.9
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 3.0e-135 485.7 365 67.9
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 3.9e-135 485.3 360 67.8
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 3.9e-135 485.3 365 67.7
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 1.5e-134 483.4 444 60.4
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 5.7e-134 481.5 365 66.6
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 1.3e-133 480.3 360 70.3
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 1.7e-133 479.9 362 68.5
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 1.7e-133 479.9 362 68.5
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 2.2e-133 479.6 368 66.3
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 4.8e-133 478.4 360 69.2
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 6.3e-133 478.0 332 74.1
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 8.2e-133 477.6 362 68.2
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 8.2e-133 477.6 381 65.6
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 7.0e-132 474.6 360 67.5
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 3.5e-131 472.2 364 67.3
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 5.9e-131 471.5 367 67.3
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 2.2e-130 469.5 357 67.5
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.1e-129 467.2 363 66.7
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 3.2e-129 465.7 361 66.2
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 7.2e-129 464.5 357 66.1
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 1.6e-128 463.4 360 66.7
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 1.0e-127 460.7 332 71.4
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.3e-125 453.8 360 65.0
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 4.8e-125 451.8 366 64.5
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 5.4e-124 448.4 367 63.2
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 1.2e-123 447.2 330 70.9
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 2.0e-123 446.4 364 64.6
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.9e-121 439.9 360 63.6
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 3.6e-120 435.6 373 63.8
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 1.0e-119 434.1 376 63.6
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.7e-117 426.8 360 61.9
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 6.3e-117 424.9 372 61.0
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 1.1e-116 424.1 336 66.7
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.8e-116 423.3 360 61.4
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 2.3e-111 406.4 361 58.4
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 5.7e-110 401.7 296 72.3
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 5.4e-108 395.2 304 63.5
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 2.0e-107 393.3 295 70.5
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 3.9e-106 389.0 291 70.8
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 1.6e-104 383.6 306 62.1
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.3e-101 374.0 361 55.1
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 1.1e-100 370.9 330 60.6
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.4e-100 370.5 228 79.4
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 2.4e-100 369.8 308 60.4
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 1.2e-99 367.5 194 90.7
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 4.6e-99 365.5 361 54.3
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 1.6e-96 357.1 194 86.6
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 2.3e-95 353.2 308 58.8
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.6e-94 349.7 360 54.4
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 3.4e-94 349.4 304 57.2
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 3.7e-93 345.9 355 51.0
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 4.9e-93 345.5 194 85.1
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.1e-92 344.4 302 58.9
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 7.1e-92 341.7 307 56.0
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 1.8e-87 327.0 304 52.6
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 2.4e-68 263.5 153 81.7
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 2.4e-63 246.9 210 62.9
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.3e-58 231.1 126 84.9
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 1.6e-51 207.6 231 53.2
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 2.8e-48 196.8 100 92.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.9e-44 184.1 91 91.2
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 5.5e-44 182.6 219 46.1
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 1.4e-39 167.9 193 50.3
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 1.7e-32 144.4 88 78.4
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.4e-31 141.4 101 72.3
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 3.1e-31 140.2 149 55.0
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 5.0e-29 132.9 164 49.4
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 5.5e-28 129.4 73 79.5
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 9.4e-28 128.6 73 79.5
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 9.7e-25 118.6 168 42.9
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 1.7e-13 81.3 43 81.4
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 5.2e-10 69.7 100 40.0
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 8.3e-08 62.4 71 56.3


User provided reference genes

Program Settings