Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 2.0e-141 505.8 257 100.0
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 4.8e-119 431.4 265 83.4
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 2.5e-115 419.1 257 84.0
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 3.7e-111 405.2 256 84.8
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 3.8e-108 395.2 264 78.0
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 3.3e-99 365.5 263 73.0
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 2.6e-96 355.9 269 72.1
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 3.1e-89 332.4 254 71.7
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 1.2e-88 330.5 257 65.0
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 2.0e-88 329.7 253 72.7
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 4.1e-86 322.0 257 63.8
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 1.1e-83 313.9 251 63.7
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 2.5e-83 312.8 259 63.3
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 1.6e-82 310.1 264 61.7
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 8.1e-82 307.8 247 62.8
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 4.0e-81 305.4 263 62.7
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 5.2e-81 305.1 266 62.0
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 1.2e-80 303.9 266 60.5
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 5.8e-80 301.6 250 63.2
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 7.5e-80 301.2 259 61.0
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 9.8e-80 300.8 263 61.2
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 1.4e-78 297.0 256 62.1
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 3.2e-78 295.8 258 61.2
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 5.4e-78 295.0 228 69.7
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 5.4e-78 295.0 267 58.8
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 7.1e-78 294.7 258 64.0
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 2.1e-77 293.1 270 58.5
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 2.3e-76 289.7 211 66.8
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 3.0e-76 289.3 252 60.3
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 1.5e-75 287.0 201 66.2
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 3.3e-75 285.8 263 58.2
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 5.6e-75 285.0 212 66.5
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 1.6e-74 283.5 203 66.0
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 2.8e-74 282.7 209 64.6
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 6.2e-74 281.6 265 59.6
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 6.2e-74 281.6 212 63.7
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 1.4e-73 280.4 248 60.5
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 1.8e-73 280.0 240 59.6
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 2.3e-73 279.6 209 64.1
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 4.0e-73 278.9 254 57.5
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 8.9e-73 277.7 261 58.2
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 1.5e-72 276.9 256 60.5
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 1.5e-72 276.9 272 57.4
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.0e-72 276.6 258 58.5
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 2.6e-72 276.2 264 57.2
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 2.6e-72 276.2 254 56.7
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 1.3e-71 273.9 261 56.7
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 2.2e-71 273.1 219 60.3
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 2.9e-71 272.7 257 58.0
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 3.8e-71 272.3 256 57.4
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 2.4e-70 269.6 193 67.9
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 2.4e-70 269.6 261 58.6
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 3.2e-70 269.2 192 64.6
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 4.1e-70 268.9 215 64.7
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 7.1e-70 268.1 179 72.1
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 9.2e-70 267.7 225 61.8
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 6.0e-69 265.0 245 60.0
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 1.0e-68 264.2 239 59.8
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 1.7e-68 263.5 273 54.2
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 3.0e-68 262.7 266 54.1
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.9e-67 260.0 260 55.0
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 4.3e-67 258.8 219 58.4
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 9.6e-67 257.7 187 69.0
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 1.6e-66 256.9 272 54.0
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 4.7e-66 255.4 233 56.2
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 4.7e-66 255.4 287 54.4
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 6.2e-66 255.0 203 62.6
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 8.1e-66 254.6 203 62.1
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 2.4e-65 253.1 210 65.7
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 3.1e-65 252.7 218 61.9
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 3.1e-65 252.7 271 52.4
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 4.0e-65 252.3 194 64.9
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 8.9e-65 251.1 179 66.5
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 1.2e-64 250.8 222 60.8
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 2.0e-64 250.0 198 63.1
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 9.9e-64 247.7 171 70.8
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 1.3e-63 247.3 196 61.7
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 8.4e-63 244.6 209 60.3
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 1.1e-62 244.2 228 57.0
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 1.9e-62 243.4 253 55.3
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 9.3e-62 241.1 223 55.6
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 1.3e-60 237.3 264 50.4
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 1.7e-60 236.9 185 64.3
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 3.0e-60 236.1 308 46.8
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 1.1e-57 227.6 260 49.6
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 5.3e-57 225.3 268 50.0
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 6.9e-57 224.9 247 52.2
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 6.9e-57 224.9 228 53.5
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 1.2e-56 224.2 272 49.6
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 2.2e-55 219.9 194 58.2
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 8.4e-55 218.0 260 45.8
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.6e-50 203.8 185 57.3
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 2.8e-50 203.0 198 52.5
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 1.2e-48 197.6 176 56.2
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 2.9e-47 193.0 126 74.6
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 8.4e-47 191.4 193 48.2
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 2.4e-46 189.9 138 65.2
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 6.0e-45 185.3 182 50.5
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 1.0e-44 184.5 143 63.6
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 1.8e-44 183.7 203 47.3
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 9.6e-43 177.9 185 56.8
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-38 163.3 179 49.2
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 5.5e-38 162.2 92 89.1
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 8.5e-31 138.3 152 52.0
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 3.2e-30 136.3 183 44.8
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 3.9e-28 129.4 81 74.1
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 8.7e-28 128.3 161 49.1
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 4.6e-21 105.9 75 65.3
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 2.7e-13 80.1 95 45.3
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 4.4e-11 72.8 42 81.0


User provided reference genes

Program Settings