Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06966_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.8e-111 405.2 196 100.0
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 8.1e-66 254.2 175 70.9
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.1e-65 253.8 175 72.0
Ca_22936_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.9e-62 243.0 153 77.8
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.1e-61 239.6 153 74.5
Ca_19966_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.8e-50 202.6 112 84.8
Ca_19747_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.1e-45 186.4 156 60.9
Ca_24076_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.9e-43 179.9 148 58.8
Ca_12999_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 6.9e-41 171.4 147 55.1
Ca_07062_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.1e-38 164.1 152 54.6
Ca_01749_v3 Cicer arietinum L. HOM05D011496 ORTHO05D010768 2.3e-36 156.4 108 67.6
Ca_02998_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.6e-32 142.9 153 52.3
Ca_07368_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 4.6e-29 132.1 142 52.1
Ca_07046_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 7.6e-24 114.8 104 54.8
Ca_04804_v3 Cicer arietinum L. HOM05D000047 ORTHO05D015604 1.1e-22 110.9 65 80.0
Ca_13847_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.3e-20 104.0 89 59.6
Ca_23456_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 1.5e-19 100.5 220 29.5
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 6.3e-18 95.1 220 29.1
Ca_13848_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.1e-17 92.8 90 52.2
Ca_27971_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.5e-16 90.5 54 74.1
Ca_23936_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.1e-14 84.3 149 32.9
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 3.2e-14 82.8 211 27.5
Ca_06788_v3 Cicer arietinum L. HOM05D010731 ORTHO05D002983 1.1e-11 74.3 149 32.2
Ca_04945_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.5e-11 73.2 129 37.2
TPR.G14983 Trifolium pratense HOM05D011496 ORTHO05D000589 3.3e-11 72.8 75 45.3
Medtr3g069345 Medicago truncatula HOM05D011496 ORTHO05D010768 7.4e-11 71.6 138 31.9
Ca_03536_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.7e-10 70.5 61 57.4
Ca_04839_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.8e-10 69.7 79 44.3
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 2.8e-10 69.7 53 52.8
Ca_07643_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 1.8e-09 67.0 130 33.8
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 3.1e-09 66.2 202 25.7
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 4.1e-09 65.9 53 47.2
VMungo0720G0831 Vigna mungo HOM05D000015 ORTHO05D048578 1.2e-08 64.3 70 42.9
PGSC0003DMG400020692 Solanum tuberosum HOM05D000047 ORTHO05D015746 2.9e-07 59.7 60 46.7
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 2.9e-07 59.7 60 43.3
Sed0016672 Sechium edule HOM05D000047 ORTHO05D000589 3.8e-07 59.3 44 54.5
Sopen12g009400 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-07 59.3 69 40.6
Nitab4.5_0002656g0090 Nicotiana tabacum HOM05D000047 ORTHO05D000589 5.0e-07 58.9 163 31.3
TPR.G10789 Trifolium pratense HOM05D000047 ORTHO05D000589 5.0e-07 58.9 45 57.8
Sopen05g023420 Solanum pennellii HOM05D000047 ORTHO05D009561 6.5e-07 58.5 56 50.0
Sopen08g018340 Solanum pennellii HOM05D000047 ORTHO05D000589 6.5e-07 58.5 150 30.0
PGSC0003DMG400002247 Solanum tuberosum HOM05D000047 ORTHO05D000589 6.5e-07 58.5 115 33.9
Sopen03g011660 Solanum pennellii HOM05D000047 ORTHO05D000589 8.5e-07 58.2 123 29.3
Sopen12g017070 Solanum pennellii HOM05D000047 ORTHO05D000589 8.5e-07 58.2 70 38.6
Sopen01g022050 Solanum pennellii HOM05D000014 ORTHO05D000589 1.4e-06 57.4 70 38.6
Medtr7g010878 Medicago truncatula HOM05D011496 ORTHO05D010768 1.9e-06 57.0 146 30.1
Sopen10g013970 Solanum pennellii HOM05D000047 ORTHO05D000589 1.9e-06 57.0 67 37.3
TPR.G20886 Trifolium pratense HOM05D009185 ORTHO05D010768 1.9e-06 57.0 38 60.5
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 1.9e-06 57.0 63 42.9
Ca_13231_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.5e-06 56.6 31 80.6
PGSC0003DMG400019609 Solanum tuberosum HOM05D000047 ORTHO05D015746 2.5e-06 56.6 98 36.7
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 2.5e-06 56.6 164 26.8
TPR.G33037 Trifolium pratense HOM05D000047 ORTHO05D000589 2.5e-06 56.6 45 55.6
Sopen01g018900 Solanum pennellii HOM05D000047 ORTHO05D000044 4.2e-06 55.8 156 26.9
PGSC0003DMG400013592 Solanum tuberosum HOM05D000047 ORTHO05D000589 4.2e-06 55.8 160 29.4
Sopen08g008700 Solanum pennellii HOM05D000047 ORTHO05D000044 5.5e-06 55.5 81 35.8
Sopen10g006540 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-06 55.5 70 38.6
PGSC0003DMG400024383 Solanum tuberosum HOM05D000047 ORTHO05D000589 5.5e-06 55.5 70 38.6
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 5.5e-06 55.5 40 52.5
Sopen07g007700 Solanum pennellii HOM05D000047 ORTHO05D000044 7.2e-06 55.1 100 32.0
Sopen08g015720 Solanum pennellii HOM05D000047 ORTHO05D000093 7.2e-06 55.1 107 31.8
Sopen11g009690 Solanum pennellii HOM05D000047 ORTHO05D000589 7.2e-06 55.1 115 32.2
Sopen12g016440 Solanum pennellii HOM05D000047 ORTHO05D000589 7.2e-06 55.1 147 28.6
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 7.2e-06 55.1 43 55.8
Sopen06g007770 Solanum pennellii HOM05D000047 ORTHO05D000044 9.4e-06 54.7 56 44.6
Sopen09g026320 Solanum pennellii HOM05D000047 ORTHO05D000044 9.4e-06 54.7 108 30.6


User provided reference genes

Program Settings