Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 0.0e+00 2238.4 1120 100.0
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 0.0e+00 1921.4 1122 86.2
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 0.0e+00 1886.7 1119 85.6
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 0.0e+00 1728.0 1120 78.0
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 0.0e+00 1662.1 1132 74.8
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 0.0e+00 1589.7 1133 72.6
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 0.0e+00 1579.7 1142 72.2
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 0.0e+00 1532.7 1136 70.6
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 0.0e+00 1528.8 1133 69.5
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 0.0e+00 1508.8 1128 68.6
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 0.0e+00 1228.8 1077 63.6
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 0.0e+00 1200.7 691 86.4
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 0.0e+00 1148.3 1129 53.4
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 0.0e+00 1139.8 1137 53.6
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 0.0e+00 1098.6 1223 50.2
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 9.9e-310 1067.0 1129 51.4
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 2.1e-304 1049.3 1128 50.8
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 6.2e-304 1047.7 1147 51.2
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 1.8e-303 1046.2 1136 51.0
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 2.9e-301 1038.9 1136 50.4
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 7.1e-300 1034.2 1145 50.2
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 1.7e-298 1029.6 1143 49.6
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 2.3e-298 1029.2 1141 50.3
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.4e-295 1019.2 1139 49.4
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 1.5e-294 1016.5 1140 49.5
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 9.9e-294 1013.8 1144 49.5
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 4.9e-293 1011.5 1144 49.4
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 5.1e-290 1001.5 1140 49.0
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 2.5e-276 956.1 1142 48.3
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 3.5e-275 952.2 1130 47.0
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 4.6e-267 925.2 1169 45.5
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 6.7e-266 921.4 1191 46.0
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 8.8e-266 921.0 1029 49.5
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.6e-262 909.4 1137 47.1
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 6.1e-259 898.3 1143 45.0
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 2.3e-258 896.3 974 50.4
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 1.7e-253 880.2 1154 43.4
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 8.2e-248 861.3 1241 42.4
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 4.4e-241 839.0 1099 45.2
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 3.5e-238 829.3 1147 43.1
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 1.6e-235 820.5 1119 43.8
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 3.6e-235 819.3 1125 43.7
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 4.7e-235 818.9 1156 42.6
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 3.4e-233 812.8 1125 43.4
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.3e-232 810.8 844 50.2
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 1.7e-232 810.4 1128 43.4
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 8.3e-232 808.1 1106 42.5
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 7.0e-231 805.1 1146 41.8
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 2.3e-229 800.0 1129 41.9
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 2.3e-226 790.0 1121 42.6
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 4.0e-226 789.3 1130 42.7
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 7.5e-225 785.0 1135 41.9
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 3.3e-220 769.6 1116 42.5
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 2.8e-219 766.5 1129 43.0
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 1.4e-218 764.2 1114 41.2
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 5.2e-218 762.3 1175 39.1
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 1.4e-215 754.2 813 49.0
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 5.4e-207 725.7 1013 42.1
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 1.1e-204 718.0 940 43.2
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.5e-201 707.6 1136 39.7
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 7.6e-201 705.3 939 43.1
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 2.2e-192 677.2 1006 41.5
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 3.6e-187 659.8 821 45.3
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 2.4e-183 647.1 867 42.6
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.7e-181 641.0 831 44.0
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 2.1e-179 634.0 694 48.8
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 3.4e-177 626.7 1030 37.2
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 6.2e-171 605.9 1125 36.7
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 8.1e-171 605.5 863 42.6
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 8.7e-165 585.5 1123 36.8
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.5e-159 567.4 1081 34.0
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 4.8e-155 553.1 330 85.8
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.7e-152 544.7 1202 32.0
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 1.4e-133 481.9 1137 31.2
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 5.9e-129 466.5 865 36.1
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 1.5e-108 398.7 404 54.5
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 8.6e-104 382.9 297 65.0
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 1.3e-88 332.4 842 30.0
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 4.7e-86 323.9 306 55.6
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 4.3e-71 274.2 275 56.0
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 4.5e-68 264.2 274 53.3
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 1.2e-65 256.1 1149 25.1
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 5.1e-64 250.8 203 60.1
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.4e-61 241.9 401 37.2
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 2.3e-56 225.3 397 35.8
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 2.4e-53 215.3 231 55.4
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 5.3e-53 214.2 215 56.7
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 2.0e-52 212.2 266 49.6
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.7e-49 201.8 416 31.5
Medtr7g110110 Medicago truncatula HOM05D007419 ORTHO05D009327 3.3e-47 194.9 124 80.6
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 9.7e-47 193.4 435 31.7
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 1.1e-42 179.9 986 22.4
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 2.1e-41 175.6 154 58.4
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 2.1e-41 175.6 154 58.4
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 3.3e-31 141.7 144 50.7
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 5.3e-29 134.4 150 48.7
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 9.1e-29 133.7 217 40.1
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.7e-27 129.4 157 47.1
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 2.9e-27 128.6 85 72.9
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 1.8e-21 109.4 115 57.4
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.5e-18 99.8 625 19.2
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 2.7e-12 79.0 83 49.4
Psat0s7003g0080 Pisum sativum HOM05D000746 ORTHO05D000573 7.5e-07 60.8 43 72.1


User provided reference genes

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