Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06908_v3 Cicer arietinum L. HOM05D003991 ORTHO05D004883 0.0e+00 1489.9 783 100.0
TPR.G23393 Trifolium pratense HOM05D003991 ORTHO05D004883 0.0e+00 1392.9 784 93.2
Psat3g203280 Pisum sativum HOM05D003991 ORTHO05D004883 0.0e+00 1350.9 785 90.3
Lj1g0022443 Lotus japonicus HOM05D003991 ORTHO05D004883 0.0e+00 1335.5 785 89.8
Medtr7g016900 Medicago truncatula HOM05D003991 ORTHO05D004883 0.0e+00 1329.7 774 90.8
Lalb_Chr10g0092711 Lupinus albus HOM05D003991 ORTHO05D004883 0.0e+00 1301.2 800 86.0
VMungo1383G3466 Vigna mungo HOM05D003991 ORTHO05D004883 0.0e+00 1292.3 792 86.0
Glyma.08G251400 Glycine max HOM05D003991 ORTHO05D004883 0.0e+00 1290.8 796 86.3
Phvul.008G026400 Phaseolus vulgaris HOM05D003991 ORTHO05D004883 0.0e+00 1287.7 794 85.5
Glyma.18G274100 Glycine max HOM05D003991 ORTHO05D004883 0.0e+00 1285.4 796 85.7
arahy.Tifrunner.gnm1.ann1.YA99EJ Arachis hypogaea HOM05D003991 ORTHO05D004883 0.0e+00 1255.4 792 83.5
arahy.Tifrunner.gnm1.ann1.T6I3L8 Arachis hypogaea HOM05D003991 ORTHO05D004883 0.0e+00 1241.5 793 82.8
Ciclev10011098m.g Citrus clementina HOM05D003991 ORTHO05D004883 0.0e+00 1183.3 803 77.2
CANSAT64G1645 Cannabis sativa HOM05D003991 ORTHO05D004883 0.0e+00 1175.6 809 76.3
Cfa007697 Carpinus fangiana HOM05D003991 ORTHO05D004883 0.0e+00 1159.8 798 77.4
Prupe.3G248800 Prunus persica HOM05D003991 ORTHO05D004883 0.0e+00 1159.4 798 76.3
Duzib138G0045 Durio zibethinus HOM05D003991 ORTHO05D004883 0.0e+00 1158.3 808 75.2
TWI32G1311 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 0.0e+00 1157.5 799 75.6
CiPaw.03G082800 Carya illinoinensis HOM05D003991 ORTHO05D004883 0.0e+00 1156.7 779 77.9
COL.COLO4_10252 Corchorus olitorius HOM05D003991 ORTHO05D004883 0.0e+00 1156.4 808 75.0
Eucgr.I02064 Eucalyptus grandis HOM05D003991 ORTHO05D004883 0.0e+00 1155.6 789 76.2
TWI34G0665 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 0.0e+00 1153.3 795 75.6
Gorai.001G207000 Gossypium raimondii HOM05D003991 ORTHO05D004883 0.0e+00 1150.2 797 76.3
Potri.017G100300 Populus trichocarpa HOM05D003991 ORTHO05D004883 0.0e+00 1147.9 805 76.5
MD17G1065900 Malus domestica HOM05D003991 ORTHO05D004883 0.0e+00 1142.9 791 76.4
Manes.01G103600 Manihot esculenta HOM05D003991 ORTHO05D004883 0.0e+00 1142.1 802 74.2
Manes.02G059600 Manihot esculenta HOM05D003991 ORTHO05D004883 0.0e+00 1141.7 794 75.2
Atru.chr8.642 Acer truncatum HOM05D003991 ORTHO05D004883 0.0e+00 1139.8 801 75.8
MD09G1074500 Malus domestica HOM05D003991 ORTHO05D004883 0.0e+00 1139.4 799 75.1
Potri.004G114600 Populus trichocarpa HOM05D003991 ORTHO05D004883 0.0e+00 1137.5 801 75.8
Haze_14380 Corylus avellana HOM05D003991 ORTHO05D004883 0.0e+00 1136.7 871 71.5
FAN05G5440 Fragaria x ananassa HOM05D003991 ORTHO05D004883 0.0e+00 1135.2 793 75.3
FvH4_6g46350 Fragaria vesca HOM05D003991 ORTHO05D004883 0.0e+00 1133.2 780 76.2
FAN09G2010 Fragaria x ananassa HOM05D003991 ORTHO05D004883 0.0e+00 1132.5 780 75.9
Duzib133G0226 Durio zibethinus HOM05D003991 ORTHO05D004883 0.0e+00 1127.9 801 74.3
MELO3C026296.2 Cucumis melo HOM05D003991 ORTHO05D004883 0.0e+00 1127.1 806 74.4
Lj4A124G55 Lonicera japonica HOM05D003991 ORTHO05D004883 0.0e+00 1124.4 800 74.5
CSS0001564 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 0.0e+00 1123.2 808 73.5
RcHm_v2.0_Chr2g0164851 Rosa chinensis HOM05D003991 ORTHO05D004883 0.0e+00 1122.1 800 74.4
FAN14G3680 Fragaria x ananassa HOM05D003991 ORTHO05D004883 0.0e+00 1120.9 794 74.6
Hma1.2p1_1837F.1_g304750 Hydrangea macrophylla HOM05D003991 ORTHO05D004883 0.0e+00 1119.4 817 73.3
TAR622G0714 Trochodendron aralioides HOM05D003991 ORTHO05D004883 0.0e+00 1117.8 808 73.9
DCAR_011017 Daucus carota HOM05D003991 ORTHO05D004883 0.0e+00 1117.4 794 74.1
CsaV3_4G010070 Cucumis sativus L. HOM05D003991 ORTHO05D004883 0.0e+00 1112.8 805 73.5
vmacro18126 Vaccinium macrocarpon HOM05D003991 ORTHO05D004883 0.0e+00 1112.4 842 70.8
FAN02G3988 Fragaria x ananassa HOM05D003991 ORTHO05D004883 0.0e+00 1104.0 794 73.7
Sed0026923 Sechium edule HOM05D003991 ORTHO05D004883 0.0e+00 1104.0 803 72.7
Cpa.g.sc541.1 Carica papaya HOM05D003991 ORTHO05D004883 0.0e+00 1102.4 757 76.6
AT5G38880 Arabidopsis thaliana HOM05D003991 ORTHO05D004883 0.0e+00 1099.7 798 72.1
AL7G51550 Arabidopsis lyrata HOM05D003991 ORTHO05D004883 0.0e+00 1098.2 798 71.9
PGR004G0075 Punica granatum HOM05D003991 ORTHO05D004883 0.0e+00 1095.5 786 73.7
Carub.0007s3697 Capsella rubella HOM05D003991 ORTHO05D004883 0.0e+00 1091.3 799 71.7
Lsat_1_v5_gn_3_96860 Lactuca sativa HOM05D003991 ORTHO05D004883 0.0e+00 1089.3 805 71.4
ClCG07G016050 Citrullus lanatus HOM05D003991 ORTHO05D004883 0.0e+00 1083.2 849 69.7
SGA_v2.0_scaffold148G36448 Striga asiatica HOM05D003991 ORTHO05D004883 0.0e+00 1082.4 777 72.5
Nn4g23516 Nelumbo nucifera HOM05D003991 ORTHO05D004883 0.0e+00 1079.7 804 72.1
Aa31LG2G3750 Aethionema arabicum HOM05D003991 ORTHO05D004883 0.0e+00 1076.6 788 71.7
HanXRQChr02g0043871 Helianthus annuus HOM05D003991 ORTHO05D004883 0.0e+00 1075.8 790 71.8
Sp2g18130 Schrenkiella parvula HOM05D003991 ORTHO05D004883 0.0e+00 1075.8 789 72.5
Rhsim08G0077400 Rhododendron simsii HOM05D003991 ORTHO05D004883 0.0e+00 1075.1 825 70.2
Thhalv10003675m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 5.4e-312 1074.7 787 72.3
THA.LOC104822745 Tarenaya hassleriana HOM05D003991 ORTHO05D004883 1.4e-310 1069.3 805 70.9
BcaC06g30850 Brassica carinata HOM05D003991 ORTHO05D004883 1.8e-310 1068.9 786 73.3
GSVIVG01036544001 Vitis vinifera HOM05D003991 ORTHO05D004883 3.1e-310 1068.1 771 74.1
Hund13674 Selenicereus undatus HOM05D003991 ORTHO05D004883 1.5e-309 1065.8 772 71.5
Thhalv10027646m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 1.4e-307 1059.3 783 70.2
A06p39740 Brassica napus HOM05D003991 ORTHO05D004883 2.5e-307 1058.5 782 72.0
BraA06t26889Z Brassica rapa HOM05D003991 ORTHO05D004883 2.5e-307 1058.5 782 72.0
EL10Ac2g04440 Beta vulgaris HOM05D003991 ORTHO05D004883 4.2e-307 1057.7 792 70.2
Nitab4.5_0000154g0150 Nicotiana tabacum HOM05D003991 ORTHO05D004883 3.9e-305 1051.2 783 71.1
C07p38530 Brassica napus HOM05D003991 ORTHO05D004883 1.5e-304 1049.3 787 71.7
BolC7t44375H Brassica oleracea HOM05D003991 ORTHO05D004883 1.5e-304 1049.3 787 71.7
BcaC06g33715 Brassica carinata HOM05D003991 ORTHO05D004883 1.9e-304 1048.9 787 71.7
Sabra17G0086400 Salix brachista HOM05D003991 ORTHO05D004883 2.5e-304 1048.5 900 65.3
MBI17_g07944_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 1.6e-303 1045.8 808 69.9
MSTRG.2973 Avicennia marina HOM05D003991 ORTHO05D004883 2.8e-303 1045.0 782 69.8
Peaxi162Scf01002g00121 Petunia axillaris HOM05D003991 ORTHO05D004883 8.2e-303 1043.5 781 71.3
PSO782G2666 Papaver somniferum HOM05D003991 ORTHO05D004883 2.4e-302 1042.0 803 68.1
PSO063G1675 Papaver somniferum HOM05D003991 ORTHO05D004883 5.9e-301 1037.3 804 68.3
AUR62009479 Chenopodium quinoa HOM05D003991 ORTHO05D004883 7.7e-301 1036.9 784 70.0
SalBow1G2342 Salvia bowleyana HOM05D003991 ORTHO05D004883 1.0e-300 1036.6 782 69.8
Cc07_g04500 Coffea canephora HOM05D003991 ORTHO05D004883 2.2e-300 1035.4 810 68.8
Sopen03g010790 Solanum pennellii HOM05D003991 ORTHO05D004883 2.9e-300 1035.0 796 69.8
TAR374G0063 Trochodendron aralioides HOM05D003991 ORTHO05D004883 5.0e-300 1034.2 764 72.5
CAN.G427.3 Capsicum annuum HOM05D003991 ORTHO05D004883 8.8e-297 1023.5 795 69.2
Thecc.04G106400 Theobroma cacao HOM05D003991 ORTHO05D004883 4.3e-296 1021.1 646 81.7
Migut.O00382 Erythranthe guttata HOM05D003991 ORTHO05D004883 6.9e-294 1013.8 782 68.9
Solyc03g046590.3 Solanum lycopersicum HOM05D003991 ORTHO05D004883 1.1e-291 1006.5 796 68.2
AUR62023158 Chenopodium quinoa HOM05D003991 ORTHO05D004883 1.4e-291 1006.1 769 69.3
Gohir.A07G179600 Gossypium hirsutum HOM05D003991 ORTHO05D004883 2.5e-291 1005.4 647 81.0
ECA246G2054 Erigeron canadensis HOM05D003991 ORTHO05D004883 5.5e-291 1004.2 796 67.3
CiPaw.04G052100 Carya illinoinensis HOM05D003991 ORTHO05D004883 1.2e-290 1003.0 800 69.0
Gohir.D07G186400 Gossypium hirsutum HOM05D003991 ORTHO05D004883 3.9e-289 998.0 647 80.4
ATR0605G126 Amborella trichopoda HOM05D003991 ORTHO05D004883 1.3e-287 993.0 797 66.5
C09p04400 Brassica napus HOM05D003991 ORTHO05D004883 2.5e-283 978.8 772 68.8
BraA09t36055Z Brassica rapa HOM05D003991 ORTHO05D004883 5.2e-281 971.1 772 67.9
BolC9t53370H Brassica oleracea HOM05D003991 ORTHO05D004883 3.1e-278 961.8 772 68.0
unitig_748.g8415 Utricularia gibba HOM05D003991 ORTHO05D004883 2.5e-275 952.2 776 64.8
Ah.16g101030 Amaranthus hybridus HOM05D003991 ORTHO05D004883 1.5e-272 943.0 769 65.9
Lsat_1_v5_gn_2_90201 Lactuca sativa HOM05D003991 ORTHO05D004883 5.7e-272 941.0 802 63.8
Nitab4.5_0001434g0090 Nicotiana tabacum HOM05D003991 ORTHO05D004883 7.5e-272 940.6 789 65.0
A09p04180 Brassica napus HOM05D003991 ORTHO05D004883 1.7e-271 939.5 773 65.6
Oeu007082.1 Olea europaea HOM05D003991 ORTHO05D004883 3.8e-268 928.3 828 62.2
Aqoxy3G03722 Aquilegia oxysepala HOM05D003991 ORTHO05D004883 1.1e-267 926.8 774 65.5
CDE06G2000 Ceratophyllum demersum HOM05D003991 ORTHO05D004883 1.3e-263 913.3 809 60.1
BcaC04g23813 Brassica carinata HOM05D003991 ORTHO05D004883 3.3e-259 898.7 774 65.0
ECA238G0416 Erigeron canadensis HOM05D003991 ORTHO05D004883 1.0e-252 877.1 782 61.5
CSS0050035 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 3.0e-252 875.5 718 68.8
SEGI_18103 Sequoiadendron giganteum HOM05D003991 ORTHO05D004883 9.8e-248 860.5 803 57.5
HPP92_025879 Vanilla planifolia HOM05D003991 ORTHO05D004883 4.9e-247 858.2 778 58.7
HanXRQChr07g0200011 Helianthus annuus HOM05D003991 ORTHO05D004883 1.9e-246 856.3 816 58.8
BcaC04g23825 Brassica carinata HOM05D003991 ORTHO05D004883 2.4e-222 776.2 637 66.7
Sc11g0008820 Simmondsia chinensis HOM05D003991 ORTHO05D004883 4.6e-221 771.9 641 64.7
SMO147G0301 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 5.8e-208 728.4 803 51.7
Actinidia26270 Actinidia chinensis HOM05D003991 ORTHO05D004883 1.0e-204 717.6 480 79.2
Pp3c9_9760 Physcomitrium patens HOM05D003991 ORTHO05D004883 1.0e-188 664.5 837 45.6
Pp3c9_9870 Physcomitrium patens HOM05D003991 ORTHO05D004883 1.0e-188 664.5 837 45.6
Mapoly0016s0130 Marchantia polymorpha HOM05D003991 ORTHO05D004883 1.1e-179 634.4 860 44.7
Pp3c15_7610 Physcomitrium patens HOM05D003991 ORTHO05D004883 5.7e-171 605.5 837 43.8
ECA285G0010 Erigeron canadensis HOM05D003991 ORTHO05D004883 7.7e-168 595.1 619 55.4
Pp3c10_8720 Physcomitrium patens HOM05D003991 ORTHO05D004883 1.6e-165 587.4 655 50.8
MBI17_g36999_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 1.0e-164 584.7 531 62.5
Zm00001eb311840 Zea mays HOM05D003991 ORTHO05D004883 1.3e-162 577.8 459 66.0
Zm00001eb099080 Zea mays HOM05D003991 ORTHO05D004883 2.2e-162 577.0 570 56.5
AagrBONN_evm.TU.Sc2ySwM_344.1887 Anthoceros agrestis HOM05D003991 ORTHO05D004883 3.7e-162 576.2 835 42.9
Os09g0386600 Oryza sativa ssp. japonica HOM05D003991 ORTHO05D004883 3.7e-154 549.7 434 67.1
CARHR263670 Cardamine hirsuta HOM05D003991 ORTHO05D004883 8.9e-140 501.9 402 66.7
BcaB04g19523 Brassica carinata HOM05D003991 ORTHO05D004883 8.1e-109 399.1 592 45.4
BcaC04g23815 Brassica carinata HOM05D003991 ORTHO05D004883 4.0e-100 370.2 616 42.9
arahy.Tifrunner.gnm1.ann1.VU455X Arachis hypogaea HOM05D003991 ORTHO05D004883 1.3e-85 322.0 207 81.6
arahy.Tifrunner.gnm1.ann1.994D9I Arachis hypogaea HOM05D003991 ORTHO05D004883 1.3e-82 312.0 197 82.2
arahy.Tifrunner.gnm1.ann1.52AFQE Arachis hypogaea HOM05D003991 ORTHO05D004883 2.2e-82 311.2 197 82.2
arahy.Tifrunner.gnm1.ann1.YE0A4T Arachis hypogaea HOM05D003991 ORTHO05D004883 2.2e-82 311.2 197 82.2
Dinv33866 Davidia involucrata HOM05D003991 ORTHO05D004883 1.6e-80 305.1 211 75.4
CBR_g36314 Chara braunii HOM05D003991 ORTHO05D004883 1.1e-73 282.3 767 31.3
Aa31LG1G6630 Aethionema arabicum HOM05D003991 ORTHO05D004883 6.1e-72 276.6 291 56.7
Dinv33867 Davidia involucrata HOM05D003991 ORTHO05D004883 1.6e-64 251.9 211 64.5
Sp7g03030 Schrenkiella parvula HOM05D003991 ORTHO05D004883 8.8e-63 246.1 236 58.1
BcaC04g23820 Brassica carinata HOM05D003991 ORTHO05D004883 1.1e-62 245.7 465 40.2
SMO147G0173 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 9.1e-60 236.1 563 35.0
BcaC04g23819 Brassica carinata HOM05D003991 ORTHO05D004883 4.2e-49 200.7 787 28.8
Dinv33865 Davidia involucrata HOM05D003991 ORTHO05D004883 2.7e-48 198.0 131 78.6
MD09G1075300 Malus domestica HOM05D003991 ORTHO05D004883 1.4e-47 195.7 121 75.2
HPP92_006579 Vanilla planifolia HOM05D003991 ORTHO05D004883 4.5e-43 180.6 243 46.5
CSS0000762 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 1.3e-37 162.5 87 82.8
CSS0038698 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 1.3e-37 162.5 87 82.8
Sc11g0008830 Simmondsia chinensis HOM05D003991 ORTHO05D004883 1.7e-37 162.2 92 80.4
HPP92_006533 Vanilla planifolia HOM05D003991 ORTHO05D004883 3.7e-37 161.0 360 33.9
HPP92_026595 Vanilla planifolia HOM05D003991 ORTHO05D004883 2.3e-31 141.7 130 61.5
SMO147G0397 Selaginella moellendorffii HOM05D003991 ORTHO05D050858 1.7e-29 135.6 142 53.5
arahy.Tifrunner.gnm1.ann1.Q8CATI Arachis hypogaea HOM05D003991 ORTHO05D004883 9.2e-28 129.8 75 92.0
BcaC04g23821 Brassica carinata HOM05D003991 ORTHO05D004883 2.1e-24 118.6 104 56.7
Medtr7g008870 Medicago truncatula HOM05D003991 ORTHO05D004883 1.4e-23 115.9 71 77.5
HPP92_028494 Vanilla planifolia HOM05D003991 ORTHO05D004883 7.5e-22 110.2 129 54.3
HPP92_026824 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.4e-20 105.9 107 50.5
BcaB04g19526 Brassica carinata HOM05D003991 ORTHO05D004883 7.8e-19 100.1 74 64.9
Cfa002005 Carpinus fangiana HOM05D003991 ORTHO05D009743 3.9e-18 97.8 57 87.7
Medtr7g051850 Medicago truncatula HOM05D003991 ORTHO05D004883 3.9e-18 97.8 59 78.0
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 8.6e-18 96.7 84 54.8
HPP92_028205 Vanilla planifolia HOM05D003991 ORTHO05D004883 2.1e-16 92.0 113 43.4
Cfa020174 Carpinus fangiana HOM05D003991 ORTHO05D004883 8.9e-15 86.7 58 65.5
SEGI_36661 Sequoiadendron giganteum HOM05D001164 ORTHO05D018381 7.8e-11 73.6 77 51.9
QL05p023649 Quercus lobata HOM05D003991 ORTHO05D004883 5.6e-09 67.4 52 73.1
Dinv33864 Davidia involucrata HOM05D003991 ORTHO05D004883 2.1e-08 65.5 125 39.2
BcaC04g23826 Brassica carinata HOM05D003991 ORTHO05D004883 1.1e-07 63.2 100 46.0
Os11g0189900 Oryza sativa ssp. japonica HOM05D003991 ORTHO05D298446 1.4e-07 62.8 61 55.7
QL01p030546 Quercus lobata HOM05D003991 ORTHO05D004883 1.4e-07 62.8 52 69.2
QL05p049558 Quercus lobata HOM05D003991 ORTHO05D004883 4.0e-07 61.2 93 46.2
HPP92_027976 Vanilla planifolia HOM05D003991 ORTHO05D004883 4.0e-07 61.2 78 43.6
QL05p049573 Quercus lobata HOM05D003991 ORTHO05D004883 5.2e-07 60.8 51 66.7
HPP92_027770 Vanilla planifolia HOM05D003991 ORTHO05D432268 2.6e-06 58.5 76 48.7
arahy.Tifrunner.gnm1.ann1.RIH8EG Arachis hypogaea HOM05D000380 ORTHO05D000561 4.4e-06 57.8 61 62.3
HPP92_028743 Vanilla planifolia HOM05D003991 ORTHO05D004883 4.4e-06 57.8 78 52.6
HPP92_027679 Vanilla planifolia HOM05D003991 ORTHO05D004883 5.8e-06 57.4 89 44.9


User provided reference genes

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