Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_06838_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 4.9e-76 287.7 146 100.0
Ca_04160_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 4.5e-53 211.5 289 48.1
Medtr6g004840 Medicago truncatula HOM05D004963 ORTHO05D006638 3.4e-45 185.3 287 43.2
TPR.G33247 Trifolium pratense HOM05D004963 ORTHO05D006638 1.0e-44 183.7 289 43.3
Psat1g054400 Pisum sativum HOM05D004963 ORTHO05D006638 2.9e-44 182.2 289 42.9
Lj2g0007459 Lotus japonicus HOM05D004963 ORTHO05D006638 3.5e-42 175.3 289 42.2
Glyma.05G003500 Glycine max HOM05D004963 ORTHO05D006638 7.9e-42 174.1 289 40.8
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea HOM05D004963 ORTHO05D006638 3.3e-40 168.7 289 41.2
Phvul.004G006800 Phaseolus vulgaris HOM05D004963 ORTHO05D006638 8.2e-39 164.1 289 38.8
Lalb_Chr06g0175731 Lupinus albus HOM05D004963 ORTHO05D006638 2.9e-36 155.6 289 39.4
RcHm_v2.0_Chr2g0173101 Rosa chinensis HOM05D004963 ORTHO05D006638 6.9e-30 134.4 288 34.4
Thecc.04G017500 Theobroma cacao HOM05D004963 ORTHO05D006638 3.4e-29 132.1 293 32.8
Atru.chr6.2399 Acer truncatum HOM05D004963 ORTHO05D006638 4.5e-29 131.7 291 32.6
Haze_14742 Corylus avellana HOM05D004963 ORTHO05D006638 1.7e-28 129.8 291 34.4
Ciclev10018026m.g Citrus clementina HOM05D004963 ORTHO05D006638 2.2e-28 129.4 288 33.7
Gohir.D09G029000 Gossypium hirsutum HOM05D004963 ORTHO05D006638 5.0e-28 128.3 290 33.1
Prupe.3G292000 Prunus persica HOM05D004963 ORTHO05D006638 5.0e-28 128.3 288 33.7
CiPaw.03G043900 Carya illinoinensis HOM05D004963 ORTHO05D006638 6.5e-28 127.9 291 33.7
TWI56G0249 Tripterygium wilfordii HOM05D004963 ORTHO05D006638 1.4e-27 126.7 290 31.7
CANSAT64G0570 Cannabis sativa HOM05D004963 ORTHO05D006638 2.5e-27 125.9 291 33.0
MD17G1026700 Malus domestica HOM05D004963 ORTHO05D006638 2.5e-27 125.9 290 32.8
GSVIVG01032403001 Vitis vinifera HOM05D004963 ORTHO05D006638 2.5e-27 125.9 291 33.0
Gohir.A09G029300 Gossypium hirsutum HOM05D004963 ORTHO05D006638 3.2e-27 125.6 290 33.1
VMungo0464G1605 Vigna mungo HOM05D004963 ORTHO05D006638 4.2e-27 125.2 267 35.2
Cfa007367 Carpinus fangiana HOM05D004963 ORTHO05D006638 5.5e-27 124.8 291 33.7
BcaC08g44458 Brassica carinata HOM05D004963 ORTHO05D006638 7.2e-27 124.4 291 30.9
C06p19070 Brassica napus HOM05D004963 ORTHO05D006638 7.2e-27 124.4 291 30.9
BolC6t37108H Brassica oleracea HOM05D004963 ORTHO05D006638 7.2e-27 124.4 291 30.9
FvH4_6g51430 Fragaria vesca HOM05D004963 ORTHO05D006638 7.2e-27 124.4 283 32.2
Eucgr.J02245 Eucalyptus grandis HOM05D004963 ORTHO05D006638 9.4e-27 124.0 289 33.2
THA.LOC104805370 Tarenaya hassleriana HOM05D004963 ORTHO05D006638 1.6e-26 123.2 291 30.9
CSS0016229 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 2.7e-26 122.5 291 30.9
Dinv35107 Davidia involucrata HOM05D004963 ORTHO05D006638 3.6e-26 122.1 290 31.7
Thhalv10027618m.g Eutrema salsugineum HOM05D004963 ORTHO05D006638 3.6e-26 122.1 291 29.6
PGR083G0595 Punica granatum HOM05D004963 ORTHO05D006638 4.7e-26 121.7 291 31.6
A07p20280 Brassica napus HOM05D004963 ORTHO05D006638 7.9e-26 120.9 291 30.2
BraA07t29729Z Brassica rapa HOM05D004963 ORTHO05D006638 7.9e-26 120.9 291 30.2
AT5G40480 Arabidopsis thaliana HOM05D004963 ORTHO05D006638 1.0e-25 120.6 291 29.9
Sp7g01430 Schrenkiella parvula HOM05D004963 ORTHO05D006638 1.0e-25 120.6 291 30.2
Carub.0007s3510 Capsella rubella HOM05D004963 ORTHO05D006638 1.4e-25 120.2 291 30.2
BcaB02g07947 Brassica carinata HOM05D004963 ORTHO05D006638 1.8e-25 119.8 291 30.2
CARHR261510 Cardamine hirsuta HOM05D004963 ORTHO05D006638 1.8e-25 119.8 291 30.9
vmacro05867 Vaccinium macrocarpon HOM05D004963 ORTHO05D006638 2.6e-24 115.9 294 31.3
Cc07_g01650 Coffea canephora HOM05D004963 ORTHO05D006638 3.3e-24 115.5 291 30.6
AL7G49340 Arabidopsis lyrata HOM05D004963 ORTHO05D006638 7.4e-24 114.4 296 29.7
Rhsim10G0015700 Rhododendron simsii HOM05D004963 ORTHO05D006638 7.4e-24 114.4 291 30.2
Rhsim10G0016800 Rhododendron simsii HOM05D004963 ORTHO05D006638 7.4e-24 114.4 291 30.2
Sc03g0007420 Simmondsia chinensis HOM05D004963 ORTHO05D006638 7.4e-24 114.4 289 28.4
TAR629G0020 Trochodendron aralioides HOM05D004963 ORTHO05D006638 1.3e-23 113.6 294 30.3
Aa31LG9G1130 Aethionema arabicum HOM05D004963 ORTHO05D006638 1.7e-23 113.2 286 29.4
Manes.17G112100 Manihot esculenta HOM05D004963 ORTHO05D006638 4.8e-23 111.7 287 30.7
Nn4g22627 Nelumbo nucifera HOM05D004963 ORTHO05D006638 4.8e-23 111.7 294 28.6
Potri.001G345100 Populus trichocarpa HOM05D004963 ORTHO05D006638 1.1e-22 110.5 291 30.9
MELO3C026582.2 Cucumis melo HOM05D004963 ORTHO05D006638 1.8e-22 109.8 291 29.6
Sed0022939 Sechium edule HOM05D004963 ORTHO05D006638 1.8e-22 109.8 291 28.5
CAN.G257.2 Capsicum annuum HOM05D004963 ORTHO05D006638 2.4e-22 109.4 290 29.0
CsaV3_3G042810 Cucumis sativus L. HOM05D004963 ORTHO05D006638 3.1e-22 109.0 291 29.6
Sabra16G0224100 Salix brachista HOM05D004963 ORTHO05D006638 5.3e-22 108.2 287 31.0
Solyc02g070810.4 Solanum lycopersicum HOM05D004963 ORTHO05D006638 1.2e-21 107.1 290 28.6
PGSC0003DMG400008314 Solanum tuberosum HOM05D004963 ORTHO05D006638 2.0e-21 106.3 290 28.6
Sopen02g019920 Solanum pennellii HOM05D004963 ORTHO05D006638 4.5e-21 105.1 290 28.3
Ah.03g137060 Amaranthus hybridus HOM05D004963 ORTHO05D006638 1.0e-20 104.0 286 28.0
Duzib147G0997 Durio zibethinus HOM05D004963 ORTHO05D006638 1.0e-20 104.0 94 58.5
Migut.H00075 Erythranthe guttata HOM05D004963 ORTHO05D006638 1.0e-20 104.0 290 29.7
Aqoxy5G03770 Aquilegia oxysepala HOM05D004963 ORTHO05D006638 1.7e-20 103.2 293 28.7
DCAR_001439 Daucus carota HOM05D004963 ORTHO05D006638 1.7e-20 103.2 287 28.6
Nitab4.5_0001040g0180 Nicotiana tabacum HOM05D004963 ORTHO05D006638 2.2e-20 102.8 290 28.3
EL10Ac6g14083 Beta vulgaris HOM05D004963 ORTHO05D006638 3.8e-20 102.1 278 28.8
Nitab4.5_0001655g0190 Nicotiana tabacum HOM05D004963 ORTHO05D006638 3.8e-20 102.1 290 27.6
Peaxi162Scf00796g00213 Petunia axillaris HOM05D004963 ORTHO05D006638 3.8e-20 102.1 290 26.9
PSO063G6295 Papaver somniferum HOM05D004963 ORTHO05D006638 5.0e-20 101.7 295 27.8
COL.COLO4_29124 Corchorus olitorius HOM05D004963 ORTHO05D006638 6.5e-20 101.3 94 56.4
Lju41A42T102 Lonicera japonica HOM05D004963 ORTHO05D006638 1.1e-19 100.5 75 65.3
AUR62028465 Chenopodium quinoa HOM05D004963 ORTHO05D006638 9.4e-19 97.4 288 27.4
Cpa.g.sc108.69 Carica papaya HOM05D004963 ORTHO05D006638 2.7e-18 95.9 76 59.2
PSO067G0032 Papaver somniferum HOM05D004963 ORTHO05D006638 1.8e-17 93.2 295 27.1
SGA_v2.0_scaffold18G08276 Striga asiatica HOM05D004963 ORTHO05D006638 2.3e-17 92.8 288 25.7
ClCG10G013880 Citrullus lanatus HOM05D004963 ORTHO05D006638 3.9e-17 92.0 94 48.9
SalBow1G1005 Salvia bowleyana HOM05D004963 ORTHO05D006638 3.9e-17 92.0 289 27.3
AUR62043498 Chenopodium quinoa HOM05D004963 ORTHO05D006638 8.8e-17 90.9 286 26.9
Oeu046826.1 Olea europaea HOM05D004963 ORTHO05D006638 5.7e-16 88.2 291 26.1
FAN14G4225 Fragaria x ananassa HOM05D004963 ORTHO05D006638 7.4e-16 87.8 96 50.0
MSTRG.3144 Avicennia marina HOM05D004963 ORTHO05D006638 2.8e-15 85.9 290 24.8
ATR0824G203 Amborella trichopoda HOM05D004963 ORTHO05D006638 1.2e-13 80.5 297 26.9
Zm00001eb096130 Zea mays HOM05D004963 ORTHO05D006638 2.2e-12 76.3 287 24.0
unitig_748.g6983 Utricularia gibba HOM05D004963 ORTHO05D006638 2.9e-12 75.9 290 24.1
VMungo1383G2035 Vigna mungo HOM05D004963 ORTHO05D006638 3.2e-11 72.4 63 58.7
Migut.J01521 Erythranthe guttata HOM05D004963 ORTHO05D006638 4.2e-11 72.0 82 45.1
SEGI_19244 Sequoiadendron giganteum HOM05D004963 ORTHO05D006638 9.4e-11 70.9 98 43.9
Mapoly0043s0050 Marchantia polymorpha HOM05D004963 ORTHO05D006638 1.6e-10 70.1 297 24.2
CDE07G0232 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 4.4e-08 62.0 98 40.8
Pp3c27_1470 Physcomitrium patens HOM05D004963 ORTHO05D006638 6.3e-07 58.2 104 33.7
Migut.J01523 Erythranthe guttata HOM05D004963 ORTHO05D006638 3.1e-06 55.8 88 37.5


User provided reference genes

Program Settings